Mustela nigripes (black-footed ferret): 132017763
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Entry
132017763 CDS
T09425
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
132017763 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
mnp01007
]
132017763 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mnp03016
]
132017763 (VARS2)
Enzymes [BR:
mnp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
132017763 (VARS2)
Amino acid related enzymes [BR:
mnp01007
]
Aminoacyl-tRNA synthetase
Class I (U)
132017763 (VARS2)
Transfer RNA biogenesis [BR:
mnp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
132017763 (VARS2)
Prokaryotic type
132017763 (VARS2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
132017763
NCBI-ProteinID:
XP_059255759
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All DBs
Position
5:27298461..27309910
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AA seq
1064 aa
AA seq
DB search
MPHLPLGYFRSPVWGLRPLEGLPRFRALSTHSKPHGSSISRRNHEAKQKRQREKQAALEA
GIARKNKSPAESSKAWTPKEVVLYEIPTEPGEKKDVSRLLPPAYSPQYVEAAWYSWWVRE
GFFKPEYQTKLPQATGETFSMCIPPPNVTGSLHIGHALTVAIQDALVRWHRMCGDQVLWV
PGSDHAGIATQAVVEKQLWKERGVRRHELSREEFLREVWKWKEEKGGEISEQLQALGASL
DWDRECFTMDTGSSVAVTEAFVRLYEAGLLYRGQQLVNWSCALRSAISDIEVESRPLPGR
TELRLPGCSSPVSFGLLVSVAFPVDGEPGEDAEVVVGTTRPETLPGDVAVAVHPDDSRYT
HLHGRQLRHPLTGQLLPLITDSAVQPHVGTGAVKVTPAHSPADAELAARHSLSPLSVIAE
DGTMTSLCGDWLQGLHRFVAREKIMSALRERGLFRGIQNHPMVLPICSRSGDVVEYLLKS
QWFVRCQEMGDRAAQAVESGALELSPSFHQKNWQHWFSHIGDWCVSRQLWWGHQIPAYLV
MEGHTKGDKGDCWVVGRTEAEARKIAAELTGKPGAELTLQRDPDVLDTWFSSALFPFAAL
GWPQETPDLARFYPLSLLETGSDLLLFWVGRMVMLGTQLTGQLPFSKVLLHSMVRDRQGR
KMSKSLGNVLDPRDIIHGVDLQVLQAKLRDGNLDSTELAIATAAQRKDFPHGIPECGTDA
LRFALCSHGALGGDLNLSVSEVLSSRHFCNKIWNALRFILNALGEKFVPQPAEEVSPLSP
MDAWILSRLAHTAQECERGFLARELSLITHALHHFWLHNLCDVYLEAVKPVLLHSPHLPD
PLQVLFSCADVGLRLLAPLMPFLAEELWQRLPPRPSGSSAPSICVAPYPTAHSLEHWRQP
ELEQHFSRVQEAVQALRALRATYQLTKARPRVLLQSSEPGEQGLFEAFLEPLGTLGRCGV
MGLLPPGVAAPSGWAQAPLSDTTQVYMELQGLVDPQTHLSLLAARRQKLQKQLDGLMAWT
PSEGEAETKRQQRLSSLQLDLSKLDKAVSHLRQLMDACPGPGEL
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgcctcatttgcctttgggctattttcgatcaccagtctgggggctgaggcccttagag
ggcctccccaggttccgtgccctctctacccactcaaagccccatggatcctccatctcc
cgaaggaaccatgaagccaaacagaagcgccagcgagagaagcaggcggcgctggaggct
gggatagcccgaaagaacaagtcacctgcagaatccagtaaggcctggactcctaaggag
gtagtgctgtatgaaatccccacggaaccgggtgaaaagaaagatgtctcccggcttctg
cctcctgcatacagccctcaatatgttgaggctgcctggtactcttggtgggtgcgagag
ggcttcttcaaaccagagtatcagaccaagctgcctcaggctacaggggagaccttctcc
atgtgtatcccacctcccaatgtcaccggctccctacatattgggcatgcactgacggtg
gccatacaggatgccctggtgcgctggcaccggatgtgtggggatcaggtgctgtgggtt
cctggctcagatcatgcaggaattgctacacaagctgtggtggagaagcagctgtggaag
gagagaggagtaaggagacacgagctgagccgggaagaattccttagggaggtgtggaag
tggaaggaggagaaaggtggagagatcagtgagcagctccaagctctgggggcctccctg
gactgggaccgagagtgcttcactatggatactggctcctcggtggccgtgactgaagct
tttgtgcgactctacgaggcaggcttgttgtaccggggccagcagcttgtcaactggtcc
tgcgctttaagatcagccatctcggatattgaggtggagagccggccacttcctggccgc
acggagcttcgactgcctggctgctccagccctgtgtcttttggccttctcgtttctgtg
gccttccctgtggatggagagcctggtgaggatgcagaggtcgtagtgggaaccacaagg
ccagagacattgcctggagatgtggctgtggctgttcatcctgacgactcccgatacacg
catttgcatggtcgacagcttcgtcaccccttgactgggcagcttctccccctcatcaca
gactctgctgttcagccacatgtgggcacaggggcagtgaaggtgactccggcacatagc
cctgctgatgctgagctggcggcccggcacagcttgagccccctgagtgtcattgcagag
gatgggaccatgacctccctctgcggggactggctgcagggtcttcaccgatttgtggcc
cgagagaagattatgtctgcgttgagggagcggggcctgttccgaggcatccagaaccac
cccatggtgcttcctatttgcagccgttctggggatgtggttgaatacctactgaagagc
cagtggtttgtccgctgccaggagatgggggaccgagctgcgcaggctgtggagtcaggg
gctctggagctcagtccatccttccaccagaagaactggcagcactggttttcccacatc
ggggactggtgtgtctcccggcagctgtggtggggccatcagattcctgcctacctggtg
atggaggggcacacaaagggtgataagggagactgttgggtggttgggcggacagaggcc
gaggccagaaaaatagctgcagaactgacagggaaaccaggggcagagctgaccctgcag
agggatcctgatgtcctggacacatggttctcttcagctcttttcccctttgctgccctg
ggttggccccaagagaccccagacctcgctcgtttctaccccctgtcacttttggaaacg
ggcagtgaccttctgttgttctgggtgggccgcatggtcatgttggggacccagctcaca
gggcagctccccttcagcaaggtgctccttcattccatggttcgggacaggcagggccgg
aagatgagcaagtccctggggaatgtgttggacccacgagacatcatccatggggtggac
ctgcaggtgctgcaggcaaagctgagggatgggaacttggactccacagagctggcgatc
gcgactgcagcacaaagaaaggacttccctcatgggatccctgagtgtgggacagatgcc
ctgcgatttgccctgtgctcccatggggccttagggggcgacttgaacctgtctgtctct
gaggtcctgagttcccggcatttctgcaacaaaatctggaatgccctgcgctttatcctc
aatgccttaggggagaaattcgtaccccagcctgcagaggaggtgtcccccttgtccccc
atggatgcctggatcctgagccgtcttgctcatactgcccaggagtgtgagcgaggcttc
cttgctcgagagctctcacttatcacccatgccctacaccacttctggctccacaacctc
tgtgatgtctacttggaggctgtaaagccagtgctgttgcactcgccccatctcccagac
ccccttcaggtcctgttctcctgtgctgatgtcggtctccgcctcctcgccccactcatg
ccctttctggctgaagagctctggcagaggctgccccccaggcctagcggcagttctgcc
cctagcatctgtgttgctccttaccccactgcccacagcctggagcactggcgccagccg
gagctggagcagcacttctcccgggtccaggaggctgtgcaggcactgagggctctccga
gccacataccagctcaccaaggcccggccccgagtgctgctgcagagctcagagcctgga
gagcagggcctctttgaggctttcctggagcccctgggcaccctgggccgctgtggagtc
atgggcctcttacccccaggtgttgcggcgccttccggctgggcccaggccccactcagt
gacaccactcaggtgtacatggagctgcagggcctggtggacccccagacccatctgtct
ctgctagctgcccgaagacagaagttgcaaaagcagcttgatggcctcatggcctggacc
ccatcagagggagaggcggagactaagaggcagcagaggctttcttccctccagctggac
ttgtcaaagctggacaaggcagtctctcacctccggcagctgatggatgcatgtcctggc
cctggggagctctga
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integrated database retrieval system
