Mustela nigripes (black-footed ferret): 132017855
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Entry
132017855 CDS
T09425
Symbol
TAP2
Name
(RefSeq) antigen peptide transporter 2 isoform X1
KO
K05654
ATP-binding cassette, subfamily B (MDR/TAP), member 3 [EC:
7.4.2.14
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp02010
ABC transporters
mnp04145
Phagosome
mnp04612
Antigen processing and presentation
mnp05163
Human cytomegalovirus infection
mnp05168
Herpes simplex virus 1 infection
mnp05169
Epstein-Barr virus infection
mnp05170
Human immunodeficiency virus 1 infection
mnp05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132017855 (TAP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
132017855 (TAP2)
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
132017855 (TAP2)
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
132017855 (TAP2)
05168 Herpes simplex virus 1 infection
132017855 (TAP2)
05163 Human cytomegalovirus infection
132017855 (TAP2)
05169 Epstein-Barr virus infection
132017855 (TAP2)
09163 Immune disease
05340 Primary immunodeficiency
132017855 (TAP2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mnp02000
]
132017855 (TAP2)
Enzymes [BR:
mnp01000
]
7. Translocases
7.4 Catalysing the translocation of amino acids and peptides
7.4.2 Linked to the hydrolysis of a nucleoside triphosphate
7.4.2.14 ABC-type antigen peptide transporter
132017855 (TAP2)
Transporters [BR:
mnp02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
132017855 (TAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_30
AAA_21
AAA_29
ABC_ATPase
AAA_16
AAA_23
AAA_15
AAA_25
AAA_5
SRP54
AAA_33
Motif
Other DBs
NCBI-GeneID:
132017855
NCBI-ProteinID:
XP_059255950
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All DBs
Position
5:complement(30571908..30585093)
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AA seq
703 aa
AA seq
DB search
MRFSDLRPCAFLLLADSALLWLLQGTLGALLPPGLPGLWLEGTLRLGGLWCLLKVGGLLG
LVGTLLPPLCLGPPLFLSLRALVPGALSAPPVRVASAPWSWLVVGYGAAWLSWAMWALLS
SPGAQERKQGQENNTDLMWRLLKLSWPDLPYLVAAFCFLIVAVLGETFIPYYSGHVIDIL
RGDFDPDAFASAIFFMCLFSIGSSLCAGCRGSCFTFTMSRVNVRVRQLLFSSLLRQDLSF
FQDTKTGELNSRLNSDTKLMSCWLALNANVLLRSLVKVVGLYGFMLSLSPRLALLSLLKV
PLAITAEKVYDVRHQALLLDIQNALAKAGQVVREAVGGLQTVRSFGAEAQEIRLYKEALE
RCRQLWWRRDLERALYLLFQRTVHLGMQVLMLNCGVQQILAGDLTQGGLLSFLLYEEDMG
HYVQTLVYMCGDMLSNVGAAEKVFQYLDRKPKLPPPGTLAPPTLRGLVEFQDVSFAYPNR
PDQPVLKGLTFTLRPGQMTALVGPNGSGKSTVAALLQNLYQPTGGRLLLDGKPISEYEHC
YLHRQVTSVGQEPVLFSGSVRDNIAYGLKSCSDEKVMAAAQAANAHGFIQELEHGLNTDV
GEKGKQLAAGQRQCLAIARALVRNPRVLILDEATSALDVHCEQALQDWKSHGDRTVLVIA
HRLQTVQSADQVLVLRQGELREHSELMEGQDLYSRLVQQLLED
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgcggttctctgacctgagaccctgcgccttcctgctgctggcggactcggctctcctc
tggctgcttcaggggacactgggggctctccttcccccggggcttccaggcctttggctg
gaggggaccctgcgacttggagggctctggtgcctgctaaaggtgggaggactcctggga
ttggtgggaacactgctgcccccgctctgtctggggccccccctgtttctttccctaagg
gccctggtcccaggggccttgagtgctcccccagtcagagtggcttcagccccctggagc
tggctggtggtggggtatggggctgcgtggctaagctgggccatgtgggctctgctgagc
tccccaggagcccaggagaggaagcagggccaggagaacaacacagacttgatgtggagg
ctgctgaagctctcctggccagacctgccctatctcgttgcagccttctgcttccttatt
gttgccgtgttgggtgagacattcatcccttactattccggtcatgtcattgacattctg
agaggtgattttgaccctgatgcctttgccagtgccatctttttcatgtgtctcttctcc
attggcagctcactgtgtgccggctgccgtgggagctgcttcaccttcaccatgtccagg
gtcaacgtgcgggtccggcagctgcttttctcctcccttttgcgccaggacctcagtttc
ttccaggatactaagacaggggagctgaattcgagactgaactcagataccaaattgatg
agctgctggcttgctctgaatgccaacgtgctcttgcgaagcctggtcaaagtggtgggg
ctgtatggcttcatgctcagcctgtccccccggctggccctcctctctctgctcaaggtg
cctctggcaataacagctgaaaaagtgtacgatgtccgccatcaggcactgcttctggac
atccaaaatgctctggcgaaagcaggacaggtggtgcgggaggctgttggagggctgcag
acggttcgcagttttggagccgaggcgcaggaaatccgtctctataaggaggccctggaa
cggtgccggcagctgtggtggcgacgagacctggaacgtgccctctacctactctttcag
aggacggtgcacttgggaatgcaggtactgatgctgaactgtggggtgcagcagatcctg
gctggggacctcactcaaggcgggctgctctccttcctgttgtatgaggaggacatgggc
cattatgtgcagaccctggtttacatgtgcggcgatatgctcagcaacgtcggggctgcg
gagaaggtgtttcagtacctggatcggaagccaaagctgcctccgccggggacgctggcc
cctcccactctgcgggggctggtggaattccaagacgtctcttttgcgtatcccaaccgc
cccgaccagcctgtgctcaaggggctgacgttcactctacgccctggtcagatgacggct
ctggtggggcccaatgggtccgggaagagcacagtggctgccttgctgcagaatctgtac
cagcccaccgggggacggctgctgctggatgggaagcccatctccgagtacgaacactgc
tacctgcatcgacaggtgacttcggtggggcaggagcctgtgctcttctcgggttctgtg
agggacaacattgcttatgggctgaagagctgcagtgatgagaaggtgatggcagctgcc
caggccgccaatgcccatggcttcatacaggagttggagcacggactgaatacagatgta
ggggagaaagggaagcagctggctgcgggacagaggcagtgtctggccattgcccgggcc
cttgtgcggaacccacgagtcctcatcctggatgaagccaccagtgctctggacgtccat
tgtgagcaggctctgcaggactggaaatcccacggggaccgaacagtgctggtgattgct
cacaggctgcagacggtgcagagtgcggaccaggtcctggtgctcaggcagggtgagctg
cgggagcactcagagctcatggagggccaggacctctattcccgcctggtgcagcagctc
ctggaggactga
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