Mustela nigripes (black-footed ferret): 132018180
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Entry
132018180 CDS
T09425
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03015
mRNA surveillance pathway
mnp05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132018180 (HBS1L)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
132018180 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132018180 (HBS1L)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
132018180 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
AAA_22
AAA_29
DO-GTPase2
Motif
Other DBs
NCBI-GeneID:
132018180
NCBI-ProteinID:
XP_059256752
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Position
5:complement(83774400..83858694)
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AA seq
685 aa
AA seq
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MARHRNVRGYNYDEDFEDDDLYGQSVEDDYCISPSTAAQFIYSRRDRPSLGEPVEEYDYD
DLKESSNSLLNHQLSGIDQARLYSCLDHMREVLGDTVPDDTLIEAVLKNKFDVQKALAMV
LEQDKMQNWKVKSEGAISTGKIAKGKSVDSQSSRSESEIVPKVAKMTVSGKKQTMGFEVP
GVTEENGHSFHTPQKGHLSEGTGIAASDVLDTVSKPVLPSHTIQTSEEQSSTPTPVKKSG
KLRQQIDVKAELEKRQGGKQLLNLVVIGHVDAGKSTLMGHMLYLLGNVNKRTMHKYEQES
KKAGKASFAYAWVLDETGEERERGVTMDVGMTKFETTTKVITLMDAPGHKDFIPNMITGA
AQADVAILVVDASRGEFEAGFETGGQTREHGLLVRSLGVTQLAVAVNKMDQVNWQQERFQ
EITGKLGHFLKQAGFKESDVAFIPTSGLSGENLITRSQSNELTKWYKGLCLLEQIDSFKP
PQRSIDKPFRLCVSDVFKDQGSGFCVTGKIEAGYIQTGDRLLAMPPNETCTAKGITLHDE
PVDWAAAGDHVSLTLVGMDIIKINVGCIFCGPKEPIKACTRFRARILIFNIEIPITKGFP
VLLHYQTVSEPAVIKRLISVLNKSTGEVTKKKPKLLTKGQNALVELQTQRPVALELYKDF
KELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcatcggaatgtccgaggctataactacgatgaagattttgaagatgatgat
ctctatggccagtctgtagaggatgattattgtatttcgccatcaacagctgctcaattt
atttactcgcggcgtgacagaccttcccttggtgagcctgtagaagaatacgattacgac
gatctgaaagagtcttccaattctcttttgaaccatcagctgagtggaattgatcaagct
cgtctttattcatgccttgatcacatgagagaggtgcttggagacactgtgccagatgac
actttgattgaagccgttctgaagaacaagtttgatgtgcagaaggctttggcaatggtt
ctggaacaagataaaatgcagaattggaaggtcaagagtgagggagcaatatctacaggg
aagatagcaaaaggaaaatcagtagactcccagtcatctcgaagtgaatctgaaattgtg
ccaaaagttgctaaaatgactgtgtctggaaagaagcaaactatgggattcgaagtgcct
ggagtaactgaagaaaatggtcatagtttccacacacctcaaaaaggacatcttagtgaa
ggaactggcattgctgcttctgatgttcttgacactgtttctaaaccagttcttccatcc
cacaccattcaaacatcagaagagcagagctcaacaccaacaccggtgaaaaagtctggc
aagctgaggcagcagatagatgtcaaagcggaactggagaagcggcaaggagggaagcag
ctcctcaacttggtggtcattggtcatgttgatgctgggaaaagtactctgatgggccat
atgctttatcttctgggtaatgtaaacaaaagaactatgcataagtatgaacaagagtct
aaaaaggctggcaaagcttcgtttgcatatgcatgggtcttggatgagactggcgaagaa
agggaaaggggagtaacaatggatgttggtatgacgaagtttgagaccacaaccaaagtt
attacgttaatggatgctccaggccataaggatttcattccaaatatgattacaggagca
gcccaggcagatgtagccattttagttgtagacgccagcagaggagagtttgaagctggg
tttgagactgggggacaaacacgagaacatggcctcttggttcgctctcttggagtcacc
cagcttgcggttgcagtcaataagatggatcaggttaattggcaacaagaaaggtttcaa
gagattactggaaagcttgggcactttcttaagcaagcaggttttaaggaaagtgatgta
gcttttatccctacgagtggtctcagtggtgaaaatctaatcacaagatctcaatcaaat
gaactcacaaaatggtataaaggactttgtttattagaacaaattgattctttcaagcct
cctcagcgatctattgataagccttttagattatgtgtgtctgatgttttcaaagatcaa
ggatctggattttgtgtaactggtaaaattgaagctggttatatccagactggtgaccga
ctactagcaatgcctcctaatgaaacttgtactgcaaaaggaatcactctgcatgatgaa
cctgtcgactgggcggcagctggtgatcatgttagtcttacgttggttggcatggatatc
atcaagatcaatgttggctgcatattttgtggccccaaagaacccattaaagcttgtact
cgtttcagagctcgaatcctcatctttaatattgaaattcctatcactaaaggatttcct
gtgctgttacactaccagactgtcagtgaacctgccgttattaaacgactgattagtgtc
ttaaacaaaagcacaggtgaagtcacaaagaagaagccaaaactgttgactaaaggccag
aatgccttggtggagctgcagacacaacgcccggtggctctggagctgtacaaagacttc
aaggagctgggcaggttcatgctgcgctacagtggctcaaccattgccgcaggcgtggtc
acggagataaaagaatga
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