Mustela nigripes (black-footed ferret): 132019097
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Entry
132019097 CDS
T09425
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04120
Ubiquitin mediated proteolysis
mnp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132019097 (SYVN1)
04120 Ubiquitin mediated proteolysis
132019097 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnp04121
]
132019097 (SYVN1)
Enzymes [BR:
mnp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132019097 (SYVN1)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132019097 (SYVN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-RING-like
zf-ANAPC11
zf-HC5HC2H
zf-C3H2C3
zf-Nse
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
132019097
NCBI-ProteinID:
XP_059257726
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All DBs
Position
1:6929763..6937308
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AA seq
611 aa
AA seq
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MFRTAVMMAASLALTGAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKV
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWLFHCRIVSLMFLLGTLDFLFVSHAYHSILTRGASVQLVFGFEYAI
LMTMVLTIFIKYVLHSVDLQSENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTQSPAPPEPAEQGPQPAAHPP
PLLPQPPNFPQGLLPPFPPGMFPLWPPMGPFPPVPPPPSSGEAGAPPSTSAAALPRPSGA
ATTTGAAAAPAPAPGSAPAPEAGPAPGFPFPPPWMGVPLPPPFAFPPMPVPPAGFAGLTP
EELRALEGHERQHLEARLQSLRNIHTLLDAAMLQINQYLTVLASLGPPRPAASVSPTEET
APAVVTAASPTSIPSSETTTPSPGASPPAPEPEKPPAPESLGTEELPEDGEPDAAELRRR
RLQKLESPVAH
NT seq
1836 nt
NT seq
+upstream
nt +downstream
nt
atgttccgcaccgcagtgatgatggcggccagcctggcgctgaccggggccgtggtggct
catgcctactacctcaagcaccagttctaccccactgtggtgtacttgaccaagtccagc
cccagtatggcagtcctctacatccaggcctttgtccttgtctttctcttgggcaaagtg
atgggcaaggtgttctttggacagctgagggcagcagagatggagcaccttctggaacgt
tcctggtatgctgtcactgagacttgtctggccttcaccgtgtttcgggacgacttcagc
ccccgctttgttgcactcttcaccctccttctcttcctcaagtgttttcactggctggct
gaggaccgtgtggactttatggaacgcagccccaacatctcctggctctttcactgccgc
attgtctccctcatgttcctccttggtaccctggacttcctcttcgtcagccacgcctat
cacagcatcctgacccgcggggcctctgtgcagctggtgtttggctttgagtacgccatc
ctgatgactatggtcctcaccatcttcatcaagtacgtcctgcactccgtggacctccag
agcgagaacccctgggacaataaggccgtgtacatgctctacacggagctgttcacaggc
ttcatcaaggttttgctgtacatggctttcatgactatcatgatcaaggtgcacaccttc
cctctctttgccatccggcccatgtacctggccatgaggcagttcaagaaggctgtgacg
gatgccatcatgtcccgccgcgccatccgtaacatgaacacactgtatccagatgccacc
ccagaggaactccaggcaatggacaacgtctgcatcatctgccgagaagagatggtgacg
ggggccaagagattgccctgcaaccacattttccacaccagctgcctgcgctcctggttc
cagcggcagcagacctgccccacctgccgcatggacgttctccgcgcatcactgccgacc
cagtcacctgcgcccccggagcctgctgagcaggggccacagccggccgctcacccccca
ccactcctgccgcagccccccaacttcccccagggcctcctgcctccctttcctccaggc
atgttcccgctgtggcccccgatgggccccttcccacctgtcccacctccccccagctcg
ggagaggccggggcccctccatccaccagtgcagcagcccttcctcggcccagtggagcc
gccacaaccacaggggctgctgcggccccggccccagcccctggctccgcccccgcccct
gaagccggccccgccccaggcttccccttccctcccccctggatgggcgtgccgctgcct
ccaccttttgccttcccccccatgcccgtgccccccgcgggctttgccgggctgaccccg
gaggagctgcgggccctggaaggccacgagcggcagcacctggaggcccggctgcagagc
ctgcgcaacatccacacgctgctggacgccgcgatgctgcagatcaaccagtacctcacc
gtgctcgcctccctggggcccccccgacctgctgcctcagtcagccccactgaggagacg
gcccctgcggtggtcactgctgcctcccccaccagcatccccagctctgagaccaccacc
ccctcccctggggcctccccaccagcccctgagcctgaaaagcctccagctcctgagtca
ctgggcacggaggagctgcctgaggacggggagcctgatgcagcagagctccgccgccgc
cgcctgcagaagctggagtcccccgtcgcccactga
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