Mustela nigripes (black-footed ferret): 132019196
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Entry
132019196 CDS
T09425
Symbol
ATG2A
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04136
Autophagy - other
mnp04140
Autophagy - animal
mnp05010
Alzheimer disease
mnp05014
Amyotrophic lateral sclerosis
mnp05016
Huntington disease
mnp05017
Spinocerebellar ataxia
mnp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132019196 (ATG2A)
04136 Autophagy - other
132019196 (ATG2A)
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
132019196 (ATG2A)
05014 Amyotrophic lateral sclerosis
132019196 (ATG2A)
05016 Huntington disease
132019196 (ATG2A)
05017 Spinocerebellar ataxia
132019196 (ATG2A)
05022 Pathways of neurodegeneration - multiple diseases
132019196 (ATG2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132019196 (ATG2A)
03029 Mitochondrial biogenesis [BR:
mnp03029
]
132019196 (ATG2A)
Membrane trafficking [BR:
mnp04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
132019196 (ATG2A)
Mitochondrial biogenesis [BR:
mnp03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
132019196 (ATG2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
132019196
NCBI-ProteinID:
XP_059257936
LinkDB
All DBs
Position
1:7107166..7126886
Genome browser
AA seq
1930 aa
AA seq
DB search
MSRWLWPWSNCVKERVCRYLLHHYLGHFFQEHLSLDQLSLDLYKGSVALRDIHLEIWSVN
EVLESIESPLELVEGFVGSIEVAVPWAALLTDHCTVHVSGLQLTLQPRQGPGPGAADSQS
WASCMTTSLQLAQECLRDGLPEPSEPPQPLEGLEMFAQTIETVLRRIKVTFLDTVVRVEH
SPGDGEHGVAVEVHVQRLEYCDEAVRDPSQAPPVDVHQPPAFLHKLLQLAGVRLHFEELP
AQEDPPKPPLQIGSCSGYMELTVKLKQNEAFPGPKLEVAGQLGSLHLLLTPQQLQQLQEL
LSAVSLADPGGLVDKLNKSRPLGAEDLWLIEQDLNQQLQAGAVAEPLSPEPLSNPLVNLD
STDLFFSMAGLTSSVASALSELSLSDVDLGSSMHSDVASRRLSAHAHPTGKMAPTPLPDT
LRPDSLVKMTLGGMTLTLLQTSAPSSGPPDLTTHFFSEFDATKDGPFGSRDFHHLRPRFQ
RACPCSHVRLTGTAVQLSWELRTGRGRRTTSTQVHFGQLEVLECLWPRDTSEPEYTEVLS
FPSSHGSQASARPCAHLRHTQTLRRVSRSRPRRPATCHCHSELALDLADFQADVELGSLD
RLAAVLRLATVPPPEPPAGLLTEPPPAAEQQTVVRLSAPRATLQLRFPIADLRPERDPWA
GRAVRAEQLRLELSEPQFRSELNSGPGPPIPTRLELTCSDLHGTYEDGEKPPVPCLRVSK
ALDPKSPGRKYFLPQIAVTLHPQLSSAQWEAAPEKGEELERSAESPCELREPEPSPFSSK
RTMYETEEMVIPGDPEEMRTFQSRALALSRCSLEVLLPSAHIFLPSKEVYESLYNRINND
LLMWEPADLLPAPAPATHPAGFPGPSGFWHDNFKMCKSAFKLDSDSDEEDAHFFSVGASG
APQPPAPESPSPRSQSTFSTLVTVLQGRITALCETKDEVGQRLETSHGELVLDVEQGTIF
SVSQYRGQPGLGYFCLEAEKAKLYHRATVDDSRLPSRLDLPSFAPPAQLAPTIYPSEEGV
TERGASGPRGQGRGPHMLSTAVRIHLDPHKNVKEFLVTLRLHRATLRHFMALPEQSWHSQ
LLEFLDVLDDPVLGYLPPTVITVLHTHLFSCAVDYRPLYLPVRVLVTAETFTLSSNIIMD
TSTFLLRFILDDSALYLSDKCEVETPDLQRDYVCVLDVDLLELVIKTWKGSTEGKLSQPL
FELRCSNNVVRVHSCADSCALLVNLLQYVMSEGDLHPPPRPPSPTEIAGQKVQLSESPAS
LPSCPPVETALINQRDLADALLDTERSLRELTQPSGGPLPQASPVSVYLFPGERSGAQPH
LPPVVAPASSLGSRSEVKEDEKEDGDGDTLDSDEFCILDAPGLGIPPRDGEPVVTQLHPG
PIIVQDGYFSRPLGSTDLLRAPAHFPVPSSRVVLREVSLVWHLYGGRDFGPHPGHRARGS
FMGPRGSPSRCSGPNRPQNSWRTQGGSGRQHHVLMEIQLSKVSFQHEVYPAEPTSGPAAP
SQEPEERPLSRQVFIVQELEVRDRLASSQINKFLYLHTSERMPRRAHSNMLTIKALHVAP
ATHPGGPECCLRVSLMPLRLNVDQDALFFLKDFFTSLAAGIHPVVSAETSAEARPETRVQ
PSSVQEGLPEDAEMTGSREAAGGGHSCSAEQQPIYFREFRFTSEVPIWLDYHGKHVTMDQ
VGTFAGLLIGLAQLNCSELKLKRLCCRHGLLGVDKVLGYALNEWLQDIRKNQLPGLLGGV
GPMHSVVQLFQGFRDLLWLPIEQYRKDGRLMRGLQRGAASFGSSTASAALELSNRLVQAI
QATAETVYDILSPAAPIPRSLQDKRSVRRLRKGHQPADLREGVAKAYDTVREGILDTAQT
ICDVASRGHEQKGLTGAVGGVIRQLPPTVVKPLILATEATSSLLGGMRNQILPDAHKDHA
LKWRSDEGQD
NT seq
5793 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgatggctgtggccatggtcgaactgtgtgaaagagcgggtatgccgctacttg
ctgcaccactacttgggtcacttcttccaggagcacctcagcctggatcagctcagcctc
gacttgtacaagggcagcgttgccttgcgggatatccacctggagatctggtccgtgaac
gaagtgctggagtccatcgagtcacccttggagctggtggaaggcttcgtgggctctatc
gaggtggccgtgccctgggctgcgctgctcaccgaccactgcactgtgcacgtgtcaggc
ctccagctcaccctgcagcctcgccagggccccgggccaggggctgccgactcgcaaagc
tgggcctcatgcatgaccacgagcctgcagctggctcaggagtgcctccgggatgggctc
cccgagccctctgagccaccacagcccctggagggcctggaaatgtttgcccagaccatt
gagactgtgctgcgcaggatcaaggtgaccttcctggacactgtggtgagggttgagcac
tcgccgggtgatggggagcacggcgtggcagtagaagtccacgtacagagactggagtac
tgtgatgaggcagtgcgggacccaagccaggcaccgccggtggacgtgcaccagcctccc
gccttcctgcacaagctgctgcagctggcaggagtccgcctgcacttcgaggagctcccc
gcgcaggaagatcccccgaaaccccccttgcagatcggcagctgctcagggtatatggaa
ttgacagtgaaattgaagcagaatgaggccttcccaggccccaagctggaggtggctgga
cagctgggctccttgcacctgctcctgacccctcagcagctccagcagcttcaagaactg
ctcagcgccgtgagcctcgcagatcccgggggcctggttgacaagctgaacaagagccgc
ccgctaggtgccgaagacctgtggttgatcgagcaggacctgaaccagcagctgcaggca
ggggctgtggccgagcccctcagcccagaacccctcagcaaccctcttgtcaacctggac
agtactgacctcttcttctccatggcgggcctcacgagcagtgtggcttcagcactctcc
gagctctccctctcggatgtagacctgggctcctccatgcacagcgacgtggcctcccgc
cggctctctgcccatgcccacccaactggcaagatggcccccacacccctcccggacacc
ctgcgcccggactcgctagtgaagatgaccttggggggtatgaccctgaccttgctgcag
acgtctgccccatcttccggaccacctgacctcaccacccactttttttcggagtttgat
gccaccaaagatgggcccttcggctcccgtgacttccaccatctccggccgcgcttccag
agggcctgtccctgtagccatgtccggctaacggggacagctgtgcagctgtcctgggag
ctgcggacgggcaggggccggcggactaccagcacacaagtgcacttcgggcagcttgag
gtgctggagtgcttgtggcccagggacacgtcagagcccgagtacacagaggtcctcagc
ttccccagcagccacggttcccaggcctcagctcggccctgtgcccacctgcgtcataca
cagactctccgcagggtgtccaggagccgaccccggcgccccgctacctgccattgccac
tccgagctggccctggacttggctgacttccaggcggatgtggagctggggtccctggac
cggctggctgccgtgctgcgcctagccactgtaccccctcccgagccacctgctggcctc
ctgacagaacccccaccagctgccgaacagcagactgtggtgcggctgtcggcaccccgg
gccacgctgcagctgcgcttccccatcgctgacctgcggcccgagcgggacccctgggca
ggccgggccgtgcgggccgagcagctgcggctggagctgagtgagccccagttccggtca
gagctgaacagcggtcctggtcccccgatccccacccgcctggaactgacctgctccgac
ctgcatggcacttacgaagatggagagaagccacctgtcccctgccttcgggtctccaaa
gctctggatcccaagagccccgggcgcaaatacttcctgccccagatagcggtgacgcta
cacccccagctgagcagcgcccagtgggaagcggcccccgagaagggagaggagctggag
cggtcggccgagagtccgtgtgagctgcgggagccggagccctcacccttctcctccaag
aggaccatgtatgagacggaggagatggtgattcctggagaccctgaggagatgaggacc
ttccagagccgggccctggcgctgtcacgctgcagcctagaagtgctcctgcccagcgcc
cacatcttcctgcccagcaaggaggtctacgagagcctgtacaacaggatcaacaacgac
ctgctcatgtgggagcctgcagacctgcttcccgcccccgcccccgccactcaccccgct
ggcttcccgggcccctcgggcttctggcacgacaacttcaagatgtgcaagtcagccttc
aagctggactcagactccgatgaagaggatgcccacttcttctcagtaggggcatcgggt
gctccccagccccctgcccctgagtccccaagtcctcgctcccagagcaccttctcgaca
ctggtgactgtgctgcagggtcggatcacagccctctgtgagactaaggacgaggttggg
cagcggctggagacatcacatggggagctggtgttggatgtggagcaaggtaccatcttc
agcgtctcccagtaccgaggccagccaggactcggctacttctgtctggaagcggagaag
gcaaagctctaccaccgagcgactgtggatgactcccggctgcccagtcgcctggatctg
cccagctttgcccctccggcccagctggccccaaccatctacccgtcggaggaaggggtg
actgaacggggagcctcgggccccaggggccagggccgggggccccacatgctgtccaca
gctgtgcgcatccatctggacccccacaagaatgtcaaggagttcctggtgacgttgcgg
ctgcacagggccaccctgcgccacttcatggctcttccagaacaaagttggcattcccag
ctgttagagttcttagatgtgcttgatgacccagtgctgggctacctgcccccaaccgtc
atcactgtcctacacactcacctgttctcctgcgccgtggactacaggcccctctacctc
cctgtgcgtgtccttgtcaccgcggagaccttcaccctctccagcaacatcatcatggac
acctcaaccttcctgctcaggttcatcctcgatgactcagccttgtacctgtccgacaag
tgtgaggtggagaccccggacctgcagcgagattatgtctgtgtcttggatgttgacctt
ctggagctcgtgattaaaacctggaaggggagcaccgagggcaagctgagccagccgctg
ttcgagctgcgttgctccaacaacgtggtgcgcgtgcacagctgtgcggactcctgcgcc
ctgctggtcaacctgctgcagtatgtgatgagtgagggcgacctgcaccccccgccccgg
ccccccagccccacggagatcgccggccagaaggtacagctctccgagagccctgcctcc
ctgccctcctgccccccagtggagacagctctcatcaaccagcgggacctggccgacgcc
ctcttggacactgagcgcagcttacgggagctgacccagccttcaggtggccccctccct
caggcctcgcccgtgtcagtctacctcttcccaggtgaacggagcggggcccagccccac
ttgccccctgtcgtggcccctgccagcagcttggggtcccgctcagaggtcaaggaagat
gaaaaggaagacggagatggagacactctggacagtgatgagttctgcatccttgacgct
cccggcctcggcatcccgccccgagatggggagcccgtggtgacacagctgcatcccggc
cccatcatcgtgcaggacgggtacttctcccggcccctgggcagcacggacctgctgcgg
gcacctgcccacttccccgtgcccagcagccgtgtggtgctccgggaggtctcgctcgtc
tggcacctctatggcggccgggactttggcccccaccctggccacagggcaagaggcagc
ttcatgggccctaggggctccccttcccgctgctccggtcccaaccggccccagaactcc
tggcgtacgcaggggggcagtgggaggcagcaccatgtcctcatggagatccagctcagc
aaggtcagcttccagcacgaggtgtacccggcggagcccacctcgggccctgcagccccc
agccaggagccagaggagcggccgctgtcccgccaggtgttcattgtgcaggagctagag
gtccgagaccggctggcctcctcccagatcaacaagttcttgtacctgcacacgagcgag
cggatgccccgtcgcgcccactccaacatgctcaccatcaaagcgctacatgtggccccc
gccacccacccgggtggacccgagtgctgtctccgagtctcgctgatgccgctgcggctc
aacgtggaccaggacgccctgttcttcctcaaggacttcttcaccagcttggcggctggc
atccaccccgtggtctcggcagaaacgtccgctgaggctcgccccgagacccgagtccag
cccagcagtgtccaggaaggcctgcctgaggacgcagagatgaccggctcccgggaggcg
gcgggcggtgggcacagctgctcagccgagcagcagcccatctacttcagggagttccgc
ttcacgtccgaggtgcccatctggttggattaccatggcaagcacgtcaccatggaccag
gtgggcacgttcgccggcctcctcatcggcctggcccagctcaactgctccgagctgaag
ctgaagcggctctgttgccgacatggactgctgggcgtggacaaggtgctgggctacgct
ctcaacgagtggctgcaggacatccggaagaaccagctgcccggcctgctggggggggtg
ggccccatgcactcggtggtccagctcttccaagggttccgggacctgctttggctgccc
atcgagcagtacagaaaggatgggcgcctcatgcgggggctgcagcggggggctgcctcc
tttggctcatccacagcctcggccgccctggaactcagcaaccgcctggtgcaggctatc
caggccacagctgagactgtgtacgacatcctgtccccagccgcgcccatcccccgttcc
ctgcaggacaagcgctcagtgcggaggctacgaaagggccaccagcccgctgacctccgg
gagggtgtggcaaaggcctatgacaccgttcgagagggcatcctggacacggctcagacc
atctgtgatgtggcctcccgggggcacgagcagaaggggctgacgggcgccgtggggggc
gtgatccgccagctgccccccactgtggtgaagcccctcattctcgccacggaggccacg
tccagtctgcttgggggcatgcgaaaccagatccttcccgacgcacacaaggaccacgct
ctcaagtggcgttcggacgaaggccaagactga
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integrated database retrieval system
