Mustela nigripes (black-footed ferret): 132019490
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Entry
132019490 CDS
T09425
Symbol
YBX3
Name
(RefSeq) Y-box-binding protein 3 isoform X1
KO
K06099
cold shock domain protein A
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
132019490 (YBX3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnp03000
]
132019490 (YBX3)
03041 Spliceosome [BR:
mnp03041
]
132019490 (YBX3)
Transcription factors [BR:
mnp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Cold-shock domain factors, DbpA-like
132019490 (YBX3)
Spliceosome [BR:
mnp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132019490 (YBX3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSD
Herpes_LMP1
OB_RNB
S1CSD-TOTE-2
Motif
Other DBs
NCBI-GeneID:
132019490
NCBI-ProteinID:
XP_059258591
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All DBs
Position
6:complement(54528161..54554110)
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AA seq
370 aa
AA seq
DB search
MSEAGEATSTTSTTTLPQAPAEAAAAAPQDPAPKSPVGSGASQAAAPAPAALVAGNPGGD
AAPAATGTAAPASSAPAGGEDAEKKVLATKVLGTVKWFNVRNGYGFINRNDTKEDVFVHQ
TAIKKNNPRKYLRSVGDGETVEFDVVEGEKGAEAANVTGPDGVPVEGSRYAADRRRYRRG
YYGRRRGPPRNYAGEEEEEGSGSSEGFEPPATDGQFSGARSQLRRPQYRPQYRRRFPPYH
VGQTFDRRSRVFPHPNRMQAGEIGEMKEGVPEGAQLQGPVHRNPTYRPRYRRGPPRPRPA
PAVGEAEDKENQQAANGPNQPSVRRGYRRPYNYRRRPRPPNAPSQDGKETKAGEAPSENP
APATEQSSAE
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaggcgggcgaggccaccagcaccaccagcaccaccaccctcccgcaggctccg
gcggaggcggccgccgcggccccccaggaccccgcgcccaagagcccggtgggcagcggc
gcgtcccaggccgcggccccagcgcccgccgcccttgtcgcaggaaaccccggtggggac
gcggcccccgcagccacgggcaccgcggcccccgcctcttcagcccccgccggcggcgaa
gacgcggagaaaaaagttctcgccaccaaagtccttggcactgtcaaatggttcaacgtc
agaaatggatatggatttataaatcgaaatgacaccaaagaagatgtatttgtacatcag
actgccatcaagaagaataacccacggaaatatctgcgcagtgtaggcgatggagagact
gtagaatttgatgtggttgaaggagagaagggtgcagaagcagccaatgtgactggacca
gatggagttcccgtggaagggagccgttatgctgctgatcggcgccgttacagacgcggc
tactatggcaggcgccgtggacctccccgtaattacgctggggaggaggaggaggaaggg
agcggcagcagtgaaggatttgagccccctgccactgacgggcagttctctggggcccgg
agtcagctgcgccgcccccagtatcgccctcagtaccggaggcgattcccgccttaccac
gtgggacagacctttgaccgtcgctcacgggtctttccccatcccaacagaatgcaggct
ggtgagattggagagatgaaggagggagttccagagggggcacagcttcagggaccggtt
catcgaaatccaacttaccgcccgagataccggagaggccctcctcggccccgacctgcc
ccagctgttggcgaggctgaagacaaggagaaccaacaagcagccaatgggccaaaccag
ccatctgttcgccgtggataccgacgcccatacaactaccggcgtcgcccccgtcctcct
aatgctccttcccaagatggcaaagagaccaaggcaggcgaagcgccgtctgagaacccc
gctccagccaccgagcagagcagtgctgagtga
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