Mustela nigripes (black-footed ferret): 132019608
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Entry
132019608 CDS
T09425
Symbol
ARID2
Name
(RefSeq) AT-rich interactive domain-containing protein 2
KO
K11765
AT-rich interactive domain-containing protein 2
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03082
ATP-dependent chromatin remodeling
mnp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132019608 (ARID2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
132019608 (ARID2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnp03000
]
132019608 (ARID2)
03021 Transcription machinery [BR:
mnp03021
]
132019608 (ARID2)
03036 Chromosome and associated proteins [BR:
mnp03036
]
132019608 (ARID2)
Transcription factors [BR:
mnp03000
]
Eukaryotic type
Helix-turn-helix
ARID
132019608 (ARID2)
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132019608 (ARID2)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
132019608 (ARID2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARID
RFX_DNA_binding
TSTD2_N
Motif
Other DBs
NCBI-GeneID:
132019608
NCBI-ProteinID:
XP_059258938
LinkDB
All DBs
Position
6:81306848..81472180
Genome browser
AA seq
1836 aa
AA seq
DB search
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLVEHPSSSHQVLSE
IRPQAVEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTPVVRVDSVPDVSPSPSPAGIPHGPQTVGNHFQRSSVTSQSS
NLTATQMSFPVQGVHTVAQTVSRIPPNPAVHTHQQQNAPVTVIQNKAPVPCEVVKATVIQ
NSISQTAVPVSIAVGGGAAQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQAVPQSHIFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
QPQDTVIIAPSQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQPSRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPAQQSVVIVSQPAQQGQTYAPAIHQIVLANPGALPAGQTV
QLTGQPNITPSSSPSPVPATNNQVPTAMPSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
PSPQQVQVQVQQPQQVQMQVQPQQANAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVANNQAAGFGVQGQSSAQQLLVGQQNVQLVQSAMPPTGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFATATVSQGNATQLIAPAG
ITMSGTQTGVGLQVQTLPATQTSPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGATNTSNGDTKENEMQVGSLLNGRKYSDSSLPPSNSGKIQSEANQCS
LISNGPSLELGENGTSGKQNSEQMDMPDIKSDLKKPLVNGICDFDKGDGSHLSKNIPNHK
TSNHVGNGEISPVEPQGTLDATQQDTAKGDQLERISNGPILTLGGSPSVSSIQEAPNVAT
QQFSGTDLPNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPHSGSRVSHSPAL
SSDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAG
ADPSTVAKVAIESAVQQKQQHPPPYVQNVVPQNTPMTPSPAVQVQSQPNTSQPSPFSASS
QQGDPVRKPGHNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQR
FSFITHLQDKHCSKDALLAGLKQDEPGQVGSQKSSTKQPAVGGTSSTPRAQKAIVNHPSA
ALMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSV
LAISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq
5511 nt
NT seq
+upstream
nt +downstream
nt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcattttggggaggatgacgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcagat
tatctgcgtcaaagttatgggctatctatggacttcaattcgccaaatgattataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgctattaatgtatgc
actcttctatcaaatgaaagcaagcacgtcatgcaacttgaaaaagaccctaaaatcatc
actttattacttgctaatgccggggtgtttgatgacactttaggatccttttctactgta
tttggtgaagaatggaaggagaagactgatagagattttgttaagttttggaaagacatt
gttgatgataatgaagtacgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggaatctttatttcatccacctcgaaagctgggcattaatgat
attgaaggacaacgggtacttcagattgcagtgattttgcgaaatctttcctttgaagag
ggcaatgttaagctcttggcagctaatcgtacctgtcttcgtttcctattactttctgca
catagtcattttatttctctaaggcaattaggccttgacacgttaggaaatattgcagct
gagcttctgttggaccctgtcgatttcaagactactcatctgatgtttcatactgttaca
aaatgcctaatgtcaagggataggtttttaaagatgaggggcatggaaattttgggaaat
ctttgcaaagcagaagataatggtgttttgatttgtgaatatgtcgatcaggactcatac
agagagatcatttgtcatctcactttacctgatgtgctgctcgtgatctcaacactcgag
gtgctatatatgctcacagaaatgggagatgttgcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttctatggatattcagatgtttggtcctgat
gcactagctgcagtaaaactcgtcgaacatccaagttccagtcatcaagttttatctgaa
attaggccacaagctgtagaacaagtccaaacccagactcatgtagcatctgccccagct
tccagagcagttgtagcacagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttctgtc
tctcgagcagaaatgtattctgagtacctctcaacatgcagtaaattagctcgtggtgga
atcctaacttcaactggattttataaatgtcttagaacggtctttccaaaccatacagtg
aagagagtggaggattccagtagcaacgggcaggcacatattcatgtcgtgggagtaaaa
cggagggctataccacttcccattcagatgtactatcagcagcaaccagtttctactcct
gttgttcgtgttgattctgttcctgatgtatctccaagtccttcacctgcaggaattcct
catggaccacaaactgtaggaaaccattttcagaggtcttctgttaccagccagtcttca
aatttgactgcaacacaaatgtcttttccagtacaaggtgttcatactgtggcacagact
gtttcaagaattccaccaaatcctgcagttcatacccaccagcaacaaaatgctccagtg
actgtcattcagaacaaagctccagttccttgtgaggtcgttaaggctacagtaatccag
aattctatatcccaaacagcagttcctgttagcattgctgtgggaggaggagctgctcag
agttctgtggttcagaatcacagtacagggccacagcctgttacagttgtaaattcccag
acattgcttcatcatccatctgtaattccacaacagtctccattacacacagtggtaccg
ggacagataccttctggcactcctgtgacagtaattcagcaagctgtcccacagagtcat
atatttggcagagtacagaacataccagcatgtacttctacagtttcacagggtcaacag
ttaatcaccacatcaccccagcctgtgcaaacttcatctcaacagacatctgctggtagc
cagccgcaagacactgttatcatagcaccttcacagtatgtgacaacttccgcatccaat
attgtctcagcaacttcagtacagaattttcaggtagctacaggacaaatggttaccatt
gcgggtgtcccaagtccacaaccctcaagggtagggtttcagaacattgcaccaaaacct
ctcccttctcagcaagtttcatcaacggtggtacaacagcccattcaacaaccacagcag
ccagcccaacaaagtgtagtgattgtaagccagccagctcaacaaggtcagacttatgca
ccagccattcaccaaattgttcttgctaatccaggagctcttccagctggtcagacagtt
cagctaactgggcaaccaaacataactccatcttcctcaccatcacctgtcccagcgact
aataaccaagtccctactgccatgccatcttcttccacccctcaatcacagggaccacct
cctactgtcagtcagatgctatctgtgaaaaggcagcaacagcagcagcattcaccagca
ccctcaccacaacaggtacaagtacaggttcagcagccccaacaagtacagatgcaagtt
caaccacagcaggcaaatgcgggcgttggtcagcctgcttctggtgagtcaagtctgata
aaacagctgctgcttccaaagcgtggtccttcgacgccgggtggtaagctaattctccca
gcaccacagattcctccccctaataatgcaagagctcctagccctcaggtggtataccag
gtggccaataaccaagcagcaggttttggagtgcaggggcaatcttcagctcagcagcta
ttggttgggcagcaaaacgttcagttggtccaaagtgcaatgccacccacagggggagtg
caaactgtgcccatctcgaacttacaaatattgccaggcccactgatttcaaacagccca
gcaaccattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaataca
agttttgcaactgcaactgtgagtcagggaaatgcaactcagctcattgctccagcagga
attaccatgagtgggacgcaaacaggagttggacttcaggtgcaaacacttccagccact
cagacatctccagctggacaatcatcctgtactactgctactcccccattcaaaggtgat
aagatcatttgccaaaaggaggaggaagcaaaagaagcaacaggtttacatgttcatgaa
cgtaaaattgaagtcatggagaacccgtcctgccgacgaggagccacgaacaccagcaat
ggggatacaaaggaaaatgaaatgcaggtgggaagtcttttaaatgggagaaagtacagt
gactcaagtctacctccttcaaactcagggaaaattcaaagtgaggctaatcagtgctca
ctaatcagtaatgggccatcattagaattaggtgagaatggaacatctggaaaacagaac
tcagaacaaatggatatgccggatatcaaaagtgatttgaaaaaacctctagttaatgga
atctgtgattttgataagggagatggttctcatttaagcaaaaacattccaaatcacaaa
acttccaatcatgtaggaaatggtgagatatctccagtggaaccacaagggactttagat
gccactcagcaagatactgccaaaggtgatcaactagaaagaatttcaaatggacctata
ttaactttgggtggttcaccatctgtgagcagtatacaggaggctccaaatgtggcaaca
cagcagtttagtggtactgacttgcctaatggacctctagcttcaagtttgaattcagat
gtgcctcagcaacgcccaagtgtagttgtctcaccgcattctacaacctctgttatacag
gggcatcaaatcatagcagttccccactcaggatcaagagtgtcccattctcctgcccta
tcatctgacgttcggtctacaaatggcacagcagaatgcaaaactgtaaagcggccggca
gaggatactgatagggaaacagtcgcaggaattccaaataaagtaggagttagaattgtt
acaatcagtgaccccaacaatgctggctgcagtgcaacaatggttgctgtgccggcggga
gcagatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcagcag
cacccgccgccatacgtacagaatgtggtcccacagaacactcctatgacgccttcacca
gctgtgcaagtgcagagccagcctaacacttcccagccttctccattcagtgcatctagt
caacaaggggatccagtgagaaaacctggacacaacttcatgtgtctgtggcagtcttgt
aaaaagtggtttcagacaccctcacaggttttctaccatgcagcaactgaacatggaggc
aaagatgtatatccagggcagtgtctttgggaaggttgtgaaccttttcagcgacagagg
ttttcttttattacccacttacaggataagcactgttcaaaagatgccctgcttgcagga
ttaaaacaagatgaaccaggacaagtgggaagtcaaaaatcttctaccaagcagcctgct
gtagggggcacaagctcaactcctagagcacagaaggccattgtgaatcatcccagtgct
gccctgatggctcttaggagaggatcaagaaaccttgtctttcgagattttacagatgaa
aaagagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatatt
ggtaaatattccgaatgtggtcgcagattgttaaagagacatgaaaacaacttatcagtg
ctagccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaat
tttacagttcagagtaaagaacaagaaaaagactcagaaatgctgcagtga
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integrated database retrieval system
