Mustela nigripes (black-footed ferret): 132019741
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Entry
132019741 CDS
T09425
Symbol
CALCOCO1
Name
(RefSeq) calcium-binding and coiled-coil domain-containing protein 1 isoform X1
KO
K25828
calcium-binding and coiled-coil domain-containing protein 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnp03021
]
132019741 (CALCOCO1)
04131 Membrane trafficking [BR:
mnp04131
]
132019741 (CALCOCO1)
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
Others
132019741 (CALCOCO1)
Membrane trafficking [BR:
mnp04131
]
Autophagy
ER-phagy
ER-phagy recepters
132019741 (CALCOCO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CALCOCO1
SKICH
Zn-C2H2_12
APG6_N
Crescentin
CC4_CEP85
Vps23_core
Fez1
Pox_A8
zf-Tbcl_FmdE
Motif
Other DBs
NCBI-GeneID:
132019741
NCBI-ProteinID:
XP_059259271
LinkDB
All DBs
Position
6:complement(88285963..88302741)
Genome browser
AA seq
692 aa
AA seq
DB search
MEESSLSRAPSRGGVNFLNVARTYIPNTKVECHYTLPPGTVPSASDWIGIFKVEAACVRD
YHTFVWSSVPESAADGSPVHASVQFQASYLPKPGAQLYQFRYVNRQGRVCGQSPPFQFRE
PRPMDELVTLEETDGGSDILLVVPKATVLQNQLDESQQERNDLMQLKLQLEGQVTELRNQ
VQDLETALATARQEHAELMEQYKGLSRSHGELIEERDILSQQQGDHVARILELEDDIQAI
SEKVLTKEVELDRVRDTVKALTREQEKLLGQLKEAQADKEQSEAELQMAQEENHRLNLEL
QEAKGRQEEQGAQAQRLKDKVAQMKDTLGQAQQRVAELEPLREQLRGAQELAASSQQKAT
LLGEELASAAGARDRTMAELHRSRLEVAGVNGRLAELSLHLKEEKSQWSKERAGLLQSVE
AEKDKILKLSAEILRLEKAVQEEKTQNQVFKTELAREKDSSLVQLSESKRELTELRSALR
VLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWSEGAATEDEEAASGLSCPAALTDSE
DESPEDMRLPPYGLCERGDSGSSPAGPQEASPLVVISQPAPIAPHLSGPAEDSSSDSEAE
DEKSVLMAAVQSGGEEANLLLPELGNAFYDMASGFAVGPLSEASTGGPATPPPWKECPIC
KERFPAENDKDALEDHMDGHFFFSTQDPFTFE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atggaagaatcatcactaagccgggcaccttcccgaggtggagtcaactttctgaatgta
gcccggacctacatccccaacaccaaggtggaatgtcactatacccttcccccaggcacc
gtgcccagtgccagcgactggattggcatcttcaaggtggaggctgcctgcgttcgggat
taccatacatttgtgtggtcttcagtgcccgaaagtgcggctgatggctcccctgtccac
gccagcgtccagttccaagccagctacctgcccaaacctggagcccagctctaccagttc
cgatatgtgaaccgccagggccgggtgtgtgggcagagcccccctttccagttccgagag
ccaaggcccatggatgagctggtgaccctggaggagaccgatggtggctctgacatcctg
ctggttgtccccaaggccaccgtgctgcagaaccagttggacgagagccagcaagagagg
aatgacctgatgcagttgaagctgcagctggagggacaggtgacggagctgaggaatcaa
gtccaggatcttgagactgctctggcaaccgccaggcaggagcacgctgagctgatggag
cagtacaaggggctttcccggtcccatggggagctcatagaagagagggacatcctgagt
cagcaacagggagaccatgtggcgcgcatcctggagctggaagatgacatccaggccatc
agtgagaaagtgctgacaaaggaggtggagctggacagggtgagggacacagtgaaagcc
ctgactcgggaacaagagaagctcctcgggcaactgaaagaagcgcaggcagacaaggag
caaagcgaggctgagctccaaatggcacaagaagaaaaccatcgcttaaatttggagcta
caggaagcaaagggccggcaggaggaacagggtgctcaggcccagcgactgaaggacaag
gtggcccaaatgaaggataccctaggccaggcccagcagcgtgtggccgaactggagccc
ctgagggagcagcttcgaggagcccaggagctcgcagcctcaagccagcagaaagccacc
cttctcggggaggagctggccagtgcagcaggagccagggaccgcacaatggccgagctc
caccgcagtcgcctggaagtggccggagtcaacggcaggctggctgagctcagcctgcac
ctgaaggaggaaaaaagccagtggagcaaggagcgtgcggggctgctgcagagtgtggag
gcggagaaagacaagatcctgaagctgagtgcagagatactgcgactggaaaaggcagtt
caagaggagaagacccagaaccaagtgttcaagactgaactggcccgggaaaaggattct
agcctggtgcagctgtcagagagcaagcgggaactgacagagctgcggtcagccctgcgt
gtgctccagaaggaaaaggaacagttgcaggaggagaagcaggagctgctggagtacatg
agaaagctggaggcccgcctggagaaggtggcagacgagaagtggagtgagggcgctgcc
acagaggatgaggaggcggcctcagggctgagctgcccagcggctctgacagactcagag
gatgagtccccagaagacatgaggctccctccttatggcctgtgtgagcgcggagactcg
ggctcctctcctgctgggccacaggaggcttctcccctggttgtcatcagtcagccggct
cccattgccccccacctctcagggccagctgaggacagcagctctgactcggaggctgaa
gatgagaagtcagtcctcatggcagctgttcagagtgggggtgaggaggccaatctgctg
cttcctgagctgggcaatgccttctatgacatggccagtggctttgcagtgggtcccttg
tcagaggccagcactgggggccctgccaccccgccgccatggaaggagtgccccatttgt
aaggagcggttcccggccgagaacgataaggatgcgctggaggaccacatggatggacac
ttctttttcagcacccaggacccctttacctttgagtga
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integrated database retrieval system
