Mustela nigripes (black-footed ferret): 132019793
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Entry
132019793 CDS
T09425
Symbol
SMARCC2
Name
(RefSeq) SWI/SNF complex subunit SMARCC2 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03082
ATP-dependent chromatin remodeling
mnp04714
Thermogenesis
mnp05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132019793 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
132019793 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
132019793 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnp03021
]
132019793 (SMARCC2)
03036 Chromosome and associated proteins [BR:
mnp03036
]
132019793 (SMARCC2)
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
132019793 (SMARCC2)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132019793 (SMARCC2)
PBAF complex
132019793 (SMARCC2)
GBAF(ncBAF) complex
132019793 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
Motif
Other DBs
NCBI-GeneID:
132019793
NCBI-ProteinID:
XP_059259370
LinkDB
All DBs
Position
6:complement(91749018..91769699)
Genome browser
AA seq
1244 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEAAVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKSPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQGRQVDADTKAGRKGKELDDLVPETAKGKPELQTSASQQMLNFPDKGKEKP
TDMQNFGLRTDMYTKKNVPSKSKAAASATREWTEQETLLLLEALEMYKDDWNKVSEHVGS
RTQDECILHFLRLPIEDPYLEDSEASLGPLAYQPIPFSQSGNPVMSTVAFLASVVDPRVA
SAAAKSALEEFSKMKEEVPTALVEAHVRKVEEAAKVTGKADPAFGLESSGIAGTTSDEPE
RIEESGTDEARAEGQATEEKKEPKEPREGVGAAEEETKEKTSEVPKKDEERGKQGDSEKE
SEKSDGDPIVDTEKEKEPKEGQEEVLKDVVESEGERKTKVERDIGEGNLSTAAAAALAAA
AVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETIMDREREALEYQRQQLLA
DRQAFHMEQLKYAEMRARQQHFQQMHQQQQQPPPALPPGSQPVPPAGTGPPVVHSLAMAP
ASVAPAPAGGGAPPGSLGPSEQIGQAGSAAGPQQQQPAGAPQPGAVPPGVPPPGPHGPSP
FPNQQTPPAMMPGAVPGSGHPGVAGNAPLGLPFGMPPPPPPPAPSVIPFGSLADSISINL
PPPPNLHGHHHHLPFAPGTLPPPNLPVSMANPLHPNLPATTTMPSSLPLGPGLGSAAAQS
PAIVAAVQGNLLPSASPLPDPGTPLPPDPTAPSPGTVTPVPPPQ
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacact
gtgacccagttcgacaacgtgaggctctggctcggcaagaactacaagaagtatatccaa
gctgaaccacctaccaacaagtccttgtctagcctggttgtacagttgctacagtttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcacgaaactgccgatcaaatgt
ttcctagatttcaaagcaggaggctccctgtgccacatacttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaac
gtggaaatgttcatgaccattgagaagtccttggtgcagaataactgtctgtctcgacct
aacatatttctgtgcccagaaattgaacccaaactgctggggaaattaaaggacattatc
aagagacaccagggaacagtcactgaagataagaacaatgcctcccatgttgtgtatcct
gtcccagggaacctggaagaagaggaatgggtacgaccagtcatgaagcgggataagcag
gttcttctgcactggggctactatcctgacagttacgacacgtggatcccagccagtgaa
atcgaagcagctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag
tggattctggacacagacactttcaatgaatggatgaacgaggaagactacgaggtaaat
gacgacaaaagccctgtctcccgccgaaagaagatatcagctaagacgctgacagatgag
gtgaacagcccagattcagatcggcgggacaagaaaggagggaactataagaagaggaag
cgctccccctctccttcaccaaccccggaagctaagaagaaaaatgctaagaaaggtccc
tcgacaccttacaccaagtcgaagcgtggccacagagaggaggagcaagaagacctgacg
aaggacatggatgagccttcaccagtccccaacgtagaggaggtgacgttgcctaaaaca
gtcaacactaagaaggattcagagtccgccccagtcaaaggaggcaccatgactgacctg
gatgagcaggaggatgaaagcatggaaaccacgggcaaggatgaggatgaaaacagtacg
gggaacaagggggagcagacgaagaatccggacctccatgaggacaacgtgaccgagcag
acccaccacatcatcattcccagctacgccgcctggtttgactataacagtgttcatgcc
attgagcggagggctctccctgagttctttaacggcaagaacaagtccaagactccagaa
atctacctggcttatcgaaacttcatgattgacacctaccggctgaacccccaggaatat
cttacctccactgcctgccgcaggaacctggccggggatgtctgtgccatcatgagggtc
catgccttcctagagcagtggggtcttattaactaccaggtggatgctgagagtcgacca
accccgatggggcctccgcccacctctcacttccatgtcctggcagacacgccctccggg
ctggtgcctttacagccgaagaccccgcagggccgccaggttgatgctgataccaaggct
gggcgaaagggcaaagagctggatgacctggtgccagagacggctaagggcaagccagag
ctgcagacctctgcttcccagcaaatgctcaacttccctgacaagggcaaagagaaaccg
acagacatgcagaactttggcctgcgcacagacatgtacacgaagaagaacgtcccctcc
aagagtaaagctgcggccagtgccactcgagagtggacagaacaggagaccctgctcctc
ctggaggcactggaaatgtacaaagatgactggaacaaagtgtcagagcacgtgggaagc
cgcacgcaggatgagtgcatcttgcattttcttcgtcttcccattgaagacccgtacctg
gaggactcagaggcctccctgggccccctggcctaccagcctatccccttcagtcagtca
ggcaaccctgttatgagcactgttgccttcctggcctctgtcgtcgatcctcgagtcgcc
tctgctgctgcgaagtcggccctagaagagttctccaaaatgaaggaagaagtgcccaca
gccttggtggaggcccacgttcggaaagtggaggaggcagccaaagtgacaggcaaggct
gacccagccttcggtctggagagcagcggtatcgcaggaaccacctctgacgagcctgag
cggatcgaggagagcgggaccgacgaggcgcgggcagagggccaggccacggaggaaaag
aaggagcccaaggaaccccgagaaggagttggggctgccgaagaagaaacaaaggagaaa
accagcgaggtccccaagaaggacgaagagagagggaaacaaggtgacagcgagaaggaa
tcagagaagagcgacggggatcccatagttgacacggagaaggagaaggagccaaaggaa
gggcaggaggaagtgctgaaggatgtggtagagtcagagggggagaggaagacgaaggtg
gagcgggacatcggcgagggcaatctgtccaccgctgccgctgctgctctggccgccgcc
gcagtgaaggccaagcacctggccgctgtggaggagaggaagatcaaatcgctggtggcc
ctgctggtggagacccagatgaaaaagttggagatcaaacttcggcactttgaagagtta
gagaccatcatggaccgggagcgggaggcactggagtatcagaggcagcagctcctggcc
gacagacaagctttccatatggagcagctgaagtatgcagagatgagggcccggcagcag
cacttccagcaaatgcaccaacagcagcagcagcccccgccagccctgcccccgggctcc
cagccggtcccacctgcaggcactgggccgcctgtggttcacagcctggctatggctcca
gcctctgtcgcccctgctcctgctggcggtggggctccccccggaagcttgggcccctct
gaacagattgggcaggcagggtcagccgcggggccacagcagcagcaaccagctggagcc
ccccagcctggggcagtcccaccaggggtacccccccctggaccccatggcccctcaccg
ttccccaaccaacaaactcctcccgcaatgatgccaggggcagtgccaggcagcgggcac
ccaggcgtggcgggtaatgctcctttgggtttgcctttcggcatgccgcctcctcctcct
cctcccgctccatccgtcatcccatttggtagtctagccgactccatcagtattaacctg
ccccctcctcctaacctgcatgggcatcaccaccatctcccgttcgccccgggcactctc
cccccacctaacctgcctgtgtccatggcgaaccctctacaccctaacctgccggcgacc
accaccatgccatcttccttgcctctcgggccggggctcggatccgccgcagcccagagc
cctgccattgtggcagctgttcagggcaacctcctgcccagtgccagcccactgccagac
ccaggtacccccctgcctccagatcccacggccccgagcccaggcacagtcacccctgtg
ccacctccacagtga
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integrated database retrieval system
