Mustela nigripes (black-footed ferret): 132020132
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Entry
132020132 CDS
T09425
Symbol
VIM
Name
(RefSeq) vimentin
KO
K07606
vimentin
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04820
Cytoskeleton in muscle cells
mnp05169
Epstein-Barr virus infection
mnp05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132020132 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
132020132 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
132020132 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132020132 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mnp04812
]
132020132 (VIM)
04147 Exosome [BR:
mnp04147
]
132020132 (VIM)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
132020132 (VIM)
Cytoskeleton proteins [BR:
mnp04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
132020132 (VIM)
Exosome [BR:
mnp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132020132 (VIM)
Exosomal proteins of other cancer cells
132020132 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
DUF1664
TolA_bind_tri
DUF7491
BLOC1_2
TPR_MLP1_2
RBD-FIP
CENP-F_leu_zip
DUF4515
Laminin_II
GAS
Motif
Other DBs
NCBI-GeneID:
132020132
NCBI-ProteinID:
XP_059260222
LinkDB
All DBs
Position
6:complement(132258522..132266381)
Genome browser
AA seq
466 aa
AA seq
DB search
MSTRSVSSSSYRRMFGGPGTGSRPSSTRSYVTTSTRTYSLGSALRPSTSRSLYTSSPGGG
YVTRSSAVRLRSSVPGVRLLQDSVDFSLADAINTEFKNTRTNEKVELQELNDRFANYIDK
VRFLEQQNKILLAELEQLKGQGKSRLGDLYEEEMRELRRQVDQLTNDKARVEVERDNLAE
DIMRLREKLQEEMLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHEE
EIQELQAQIQDQHVQIDMDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSE
AANRNNDALRQAKQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEDNFAVEAANYQD
TIGRLQDEIQNMKEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRIALPLPNFSS
LNLRETNLDSLPLVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaggtctgtgtcctcgtcctcctatcgcaggatgttcggcggccccggcacc
gggagccggccgagctccacgcgcagctacgtgaccacgtccacccgcacctacagcctg
ggcagcgccctgcgccccagcaccagccgcagcctctacacctcgtccccgggcggcggg
tatgtcacgcgctcctccgcggtgcgccttcggagcagtgtgcccggcgtgcgcctgctg
caggactccgtagacttctcgctggcggacgccatcaacaccgagttcaagaacacccgc
accaacgagaaagtggagctgcaggagctgaatgaccgcttcgctaactacattgacaag
gtgcgcttcctggaacagcagaacaagattctgctggccgagctcgagcagctcaagggc
cagggcaaatcgcgcctgggggacctctacgaggaggagatgcgggagctgcgccggcag
gtggatcagcttaccaacgacaaggcccgcgtcgaagtggagcgcgacaacctggccgag
gacattatgcggctccgggagaagttgcaagaggagatgctgcagagagaggaagccgag
agcaccctgcagtctttcagacaggatgttgacaatgcttctttggcacgtcttgacctt
gagcgcaaagtggaatccttgcaggaagagattgcctttttgaagaaactccatgaggag
gaaatccaggagctgcaggcccagattcaggaccagcatgtccagatcgatatggatgtt
tccaagcccgacctcacggctgccctgcgagacgtccgccagcagtatgaaagcgtggct
gccaagaaccttcaggaggctgaggaatggtacaagtccaagtttgccgacctctctgag
gctgctaaccgaaacaatgatgccctgcgccaggcgaagcaggagtccaatgagtaccgg
agacaggtgcagtccctcacctgcgaagtggacgccctcaaagggactaatgagtctctg
gaacgccagatgcgtgaaatggaggataactttgccgtcgaagctgctaactaccaagac
actattggccgcctgcaggatgagattcagaacatgaaggaagaaatggcccgtcacctt
cgggagtaccaggacctgctgaatgtcaagatggctctcgacattgagattgccacctac
aggaagctgctggaaggcgaggagagcaggattgctctgcctcttccaaacttttcttcc
ctgaacctgagggaaaccaatctggattccctccctctggtcgatactcactcaaaaagg
acacttctgatcaagacggttgagactagagatggacaggttatcaatgaaacttctcag
catcacgatgaccttgagtaa
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