Mustela nigripes (black-footed ferret): 132020319 Help Entry 132020319         CDS       T09425                                  Symbol COL2A1 Name (RefSeq) collagen alpha-1(II) chain   KO K19719   collagen type II alpha Organism mnp  Mustela nigripes (black-footed ferret) Pathway mnp04151   PI3K-Akt signaling pathway mnp04510   Focal adhesion mnp04512   ECM-receptor interaction mnp04974   Protein digestion and absorption mnp05165   Human papillomavirus infection Brite KEGG Orthology (KO) [BR:mnp00001]  09130 Environmental Information Processing   09132 Signal transduction    04151 PI3K-Akt signaling pathway     132020319 (COL2A1)   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     132020319 (COL2A1)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     132020319 (COL2A1)  09150 Organismal Systems   09154 Digestive system    04974 Protein digestion and absorption     132020319 (COL2A1)  09160 Human Diseases   09172 Infectious disease: viral    05165 Human papillomavirus infection     132020319 (COL2A1)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:mnp00536]     132020319 (COL2A1) Glycosaminoglycan binding proteins [BR:mnp00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    132020319 (COL2A1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen COLFI VWC Motif Other DBs NCBI-GeneID:  132020319 NCBI-ProteinID:  XP_059260484 LinkDB All DBs Position 6:complement(83091017..83121610) Genome browser AA seq 1534 aa AA seqDB search MIRFGAPQTLVLLTLLVAAVLRCQGQDVRCLQRRSGKLWAQEGFPFVSSAVRRGQEWGLR HSRRELGQEFLARSSGVALNWPRAPGHLLEYALRKAAAKQKQFPEREKAGSCVQDGQRYN DKDVWKPEPCRICVCDTGTVLCDDIICEDMKDCLSPETPFGECCPICSTDLTTAGGEQGP RGDRGDKGEKGAPGPRGRDGEPGTPGNPGPPGPPGPPGPPGLGGNFAAQMAGGFDEKAGG AQMGVMQGPMGPMGPRGPPGPAGAPGPQGFQGNPGEPGEPGVSGPMGPRGPPGPPGKPGD DGEAGKPGKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGS PGENGSPGPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGA KGEAGPTGARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGF PGPRGPPGPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGA RGEPGGAGPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGE PGLPGARGLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGE PGKAGEKGLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGP PGEGGKPGDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARGLPGTPGTDGPKGA SGPAGPPGAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGP PGPAGANGEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGE AGQKGDAGAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGN PGPPGPPGPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGPDGPPGP QGLAGQRGIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGE PGREGSPGADGPPGRDGAAGVKGDRGEAGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGA QGPMGPAGPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGA SGPAGPSGPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGP PGPGIDMSAFAGLGQREKGPDPLQYMRADQPAGDLRQHDAEVDATLKSLNNQIESLRSPE GSRKNPARTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPANVPK KNWWSSKGKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNITYHC KNSIAYLDEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTKHTGKWGKTLIEYR SQKTSRLPIIDIAPMDIGGPEQEFGVDIGPVCFL NT seq 4605 nt NT seq  +upstreamnt  +downstreamnt atgatccgcttcggggctccccagacgctggtgctgctgacgctgctcgtcgccgctgtc cttcgatgtcagggccaggatgtccgttgtctccagagacggtctggaaagctctgggcc caggagggctttccgttcgttagctcggctgtgaggcgggggcaggagtggggcctgcgg cacagccgcagggagctcgggcaggagtttctggccaggtcttccggtgttgcgctgaac tggccgcgcgctcccgggcacttgttggaatacgctctgcgcaaagcggcggcgaagcaa aaacagttccccgaaagagagaaggctggcagctgtgtgcaggatgggcagaggtataat gataaggatgtgtggaaacccgagccctgccggatctgtgtctgtgacactgggactgtc ctctgcgacgacataatctgtgaagacatgaaagactgcctcagccctgagacccccttc ggagagtgctgccccatctgctcaactgacctcaccactgccggtggtgaacaaggaccc agaggtgatcgtggtgacaaaggtgaaaaaggtgcccctggacctcgtggcagagatgga gagcctgggacccctggaaatcctggccccccgggaccccctggccccccgggtcccccc ggccttggtggaaacttcgctgctcagatggctggaggattcgatgagaaggctggtggt gcccagatgggagtgatgcaagggccaatgggccccatgggacctcggggacctccaggc cctgccggtgctcctggacctcaaggatttcaaggcaaccctggtgaacctggggaaccc ggagtttcaggtcccatgggcccccgtggtcctcctggcccccctggaaaacctggtgat gatggcgaagctggaaagcctgggaaatctggtgaaagaggcccccctggccctcagggt gctcgcggcttcccgggaaccccaggccttcctggtgtcaagggtcacagaggctaccca ggtctagatggtgctaagggagaagctggggctccaggtgtgaagggagagagtggttca cccggagagaatggctctccaggcccaatgggtccccgaggcctgcccggtgagcgagga cggactggccctgctggtgctgcaggtgcccgaggcaacgatggccaaccaggtcccgca ggcccaccgggtcccgtgggtcctgctggcggtcctggcttccctggtgctcccggggcc aagggtgaagctggccccacaggtgctcgtggtcccgaaggtgctcaaggtcctcgaggt gaacctggtactcctgggtcccccgggccggctggtgcctccggtaaccccggaacagat ggaattcctggagccaaaggatctgctggtgctcctggcattgctggtgcccctggcttc cctgggccccgtgggccacctggtcctcaaggtgcaactggtcctctgggcccgaaaggt cagacgggcgagcctggtattgctggcttcaagggtgaacaaggccccaagggagaacct ggccctgctggcccccaaggagcccctggtcctgctggtgaagaaggcaaacgaggagcc cgtggagagcccggtggtgctgggcccgtcggtccccctggagagagaggcgctcctggt aaccgtggtttcccaggtcaggatggtctggcaggtcccaagggagcccctggagagcga gggcccagtggccttgctggtcccaaaggagccaatggtgaccctggccgtcctggagag cccggccttcctggagcccggggcctcactggtcgccctggtgatgctggtcctcaaggc aaagttggtccttctggagcccctggtgaagatggtcgccctggtcctccaggtcctcag ggcgctcgtgggcagcctggtgtcatgggtttccctggccccaaaggtgccaacggtgaa cctggcaaggctggtgagaagggactgcccggcgctcctggtctgagaggtcttcccggc aaagatggcgagacaggtgctgcaggaccccccggacctgccggacctgctggtgaacga ggcgagcagggtgctcctgggccatctgggttccagggacttcctggccctcctggtccc ccaggtgaaggtggaaaaccaggtgaccagggtgttcccggtgaagctggagcccccggc ctcgtgggtcccaggggcgaaagaggtttcccaggtgaacgtggctctcccggggcccag ggcctccagggcgcccgcggcctccccggcactcccggcacggacggtcccaaaggtgca tctggcccagctggcccccctggggctcaaggccctccaggtctgcaagggatgcccggt gagaggggagcagctggcatcgctgggcccaagggagacaggggtgacgttggtgagaaa ggccccgagggagcccccgggaaggacggtggacgaggcctgactggtcccattggaccc cctggccccgctggtgccaatggtgagaagggagaagttggccctcccggtcctgcagga accgctggtgctcgtggtgccccgggtgaacgtggagagactggaccccccgggcccgct ggattcgcaggtcctcctggcgctgatggccagccaggggccaagggcgagcaaggagag gccggccagaaaggtgatgctggtgccccgggtcctcagggcccctctggagctcctggg cctcagggtcctactggtgtgactggtcctaaaggagcccgaggtgctcaaggtcctccg ggagccaccggattccctggagctgctggccgcgtcggacccccaggctccaatggaaac cctgggccccctgggccccctggtccttctggaaaagatggtcccaaaggtgctcgagga gacagtggccccccgggccgtgccggtgaccctggtctccaaggtcctgctggaccccct ggcgagaagggagagcccggagatgacggtccctctggtcctgatggtcctccaggtccc caaggtctggctggccagaggggtatcgttggtctacctgggcagcgcggtgagagagga ttcccaggcttgcctgggccatcaggtgagcctggtaagcagggagctcctggtgcatct ggtgaccgaggtccccccggtcctgtgggtcctcctggcttgaccggtcccgctggtgaa cccggacgagagggaagccctggtgctgacggcccccctggcagagatggcgccgctgga gtcaagggtgatcgtggtgaggccggtgcggtgggtgcccctggtgctcctgggccccct ggctctcctggccctgctggcccaactggaaagcaaggagaccgaggagaagctggtgca caaggccccatgggtcccgcaggaccggctggagcccggggaatcccaggccctcaaggt ccccgaggtgacaaaggagaagctggagaggctggcgagaggggactgaagggacaccgt ggcttcaccggtctgcagggtctgcctggtccccccggtccttctggagaccaaggtgct tctggtcctgctggtccttctggtcctagaggtcctcctggccctgttggtccctctggc aaagatggtgctaatggaatccccggccccatcgggccccctggcccccgtggacggtca ggcgaaactggccctgccggtcctcctggaaatcccgggccccctggccctccaggtccc cccggccctggcatcgacatgtctgcctttgctggcctcggccagagagagaagggcccc gaccccctgcagtacatgcgggccgaccagccagctggtgacctgagacaacacgatgcc gaggtggacgccacgctcaagtccctcaacaaccagatcgagagcctgcgcagccccgag ggctcacgcaagaaccctgctcgaacctgccgggacctgaaactctgtcaccctgaatgg aagagcggagactactggattgaccccaaccagggctgcaccttggacgccatgaaggtt ttctgcaacatggagactggcgagacctgcgtctaccccaacccagcgaacgttcccaag aagaactggtggagcagcaagggcaaggacaagaaacacatctggtttggagaaaccatc aatggcggcttccacttcagctatggtgatgacaacctggctcccaacactgccaacgtc cagatgacgttcctacgcctgctgtccactgaaggctcccagaacatcacctaccactgc aagaacagcatcgcttacctggacgaggcagccggcaacctcaagaaggccctgctcatc cagggctccaatgacgtggagatccgggctgagggcaacagccgcttcacgtacaccgtc ctgaaggatggctgcacgaaacacaccggtaagtggggcaagactctgatcgagtaccgg tcacagaagacctcacgtctccccatcattgacattgcgcccatggacataggagggccc gagcaggaatttggtgtggacatagggcctgtctgcttcttgtaa

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