Mustela nigripes (black-footed ferret): 132020834
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Entry
132020834 CDS
T09425
Name
(RefSeq) high mobility group protein B1-like
KO
K10802
high mobility group protein B1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03410
Base excision repair
mnp04140
Autophagy - animal
mnp04217
Necroptosis
mnp04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
132020834
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
132020834
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
132020834
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
132020834
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132020834
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mnp04147
]
132020834
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
132020834
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
132020834
MMR (mismatch excision repair)
Other MMR factors
132020834
Exosome [BR:
mnp04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
132020834
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
132020834
NCBI-ProteinID:
XP_059260948
LinkDB
All DBs
Position
6:105048969..105050218
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEDDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattctttgtg
caaacttgccgggaggagcacaagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagaaaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagacatggcaaaggctgacaaggcccgttatgaaagagaaatgaaaacttatattccc
cctaaaggggaaacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gcctttttcttgttttgttctgagtatcgccccaaaatcaaaggagaacatccaggccta
tccattggtgatgttgcaaagaaactgggagaaatgtggaataacactgctgcagatgac
aagcagccttacgaaaagaaggctgctaagctgaaggaaaaatatgaaaaggatattgct
gcataccgagctaaaggaaagcctgatgcggcaaaaaagggagtcgtcaaggctgaaaag
agcaagaaaaagaaggaagaggaggaggatgaggaagatgaagaggatgaggaggaggag
gaagatgaagaagatgaagatgaagaagatgatgatgatgatgaataa
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