Mustela nigripes (black-footed ferret): 132021120
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Entry
132021120 CDS
T09425
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
132021120 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mnp03021
]
132021120 (CPSF3)
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132021120 (CPSF3)
Transcription machinery [BR:
mnp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
132021120 (CPSF3)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
132021120 (CPSF3)
U7-dependent histone pre-mRNA processing factors
132021120 (CPSF3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
CopK
Motif
Other DBs
NCBI-GeneID:
132021120
NCBI-ProteinID:
XP_059261109
LinkDB
All DBs
Position
7:6182495..6227718
Genome browser
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLCYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGVVQK
VSKKLEMHVYSKRLEIMLQDIFGEDCVSVKDGSVLSVTVDGKTANINLETRTVDCEEGSE
DDESLREMVELAARRLYEALTPAH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggagagcgaccagctgctgatccgaccccttggagctggg
caggaagtaggaagatcatgtattatcctggagttcaaaggaagaaaaataatgctggat
tgtgggatccaccctggcctagaaggaatggacgctcttccttatatcgatttaattgac
ccagctgagattgatctcctgttaatcagtcatttccatttggatcactgcggagccttg
ccctggtttctacagaagacgagtttcaaaggaagaacatttatgactcatgccacgaaa
gctatttatagatggcttctttcagattacgtcaaagtcagtaatatatcagcagacgac
atgctgtatacggagacagatctggaagagagcatggacaaaattgaaaccatcaacttc
catgaagttaaagaagttgcaggaatcaagttttggtgttaccacgcgggccacgtcctc
ggagctgccatgttcatgattgagatcgcgggtgtgaagcttttgtatacaggtgatttc
tcaagacaagaagacagacacttaatggcagctgaaattcccaatattaaacctgatatt
cttattattgaatctacttatgggacccatatccatgagaagcgtgaggagcgagaagca
agattctgtaacactgtccacgacattgtgaacagagggggcagaggtctcattcccgtc
tttgctcttggaagggctcaggagctgctcttgattttagatgagtactggcagaatcac
ccagaactccatgacattcccatatactacgcatcctctttggccaagaagtgcatggcc
gtgtaccagacgtatgtaaatgccatgaatgacaaaatccgcaaacagatcaacatcaat
aatccctttgttttcaagcacattagtaacctcaagagcatggatcatttcgatgacatc
ggtcccagcgtcgtcatggcctccccaggcatgatgcagagcggcttatccagggagctc
ttcgaaagctggtgcacggataagaggaacggcgtcattatagcagggtactgtgtggaa
gggacacttgccaagcatatcatgtctgagccagaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtctgttgattacatttctttctctgctcacacagattaccag
caaaccagtgaatttattcgtgctttgaaaccgcctcatgtgattttagtccatggagaa
caaaacgaaatggccagattgaaagcagccctgattcgagaatatgaggacaacgatgaa
gttcacatagaggttcataatcctcggaatacagaagctgtgaccttgaatttcagagga
gaaaaactagccaaggtcatgggctttttagcagacaaaaaaccagaacaaggccagcgg
gtctcgggaatacttgttaaaagaaactttaattatcatatactttctccgtgtgacctc
tccaattatactgacttggccatgagcactgtgaaacagacccaagccattccctatacc
ggcccttttaatttgctctgttaccagctacagaaattgacaggtgacgtggaagaatta
gaaattcaagaaaagcctgctctgaaagtgttcaagaatattactgtcatacaggagcca
ggaatggtggtgttagaatggctggcaaacccttccaatgatatgtatgcagatacagta
acaaccgtgatactggaagtccagtccaacccgaaaataaggaaaggtgtggtgcagaag
gtttccaaaaaattagaaatgcacgtttacagcaagaggctggagatcatgctgcaggac
atatttggagaagactgtgtaagtgtgaaagatggttctgtcctcagtgtcacagtggat
gggaaaactgctaatatcaacttggagactcggacggtggactgcgaggaaggaagcgag
gacgacgagtcgctgcgggaaatggtggagctggcggcgcggaggctctacgaggcgctc
acccccgctcactga
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integrated database retrieval system
