Mustela nigripes (black-footed ferret): 132021153
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Entry
132021153 CDS
T09425
Symbol
GEN1
Name
(RefSeq) flap endonuclease GEN homolog 1
KO
K15338
holliday junction resolvase GEN1/YEN1 [EC:3.1.-.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132021153 (GEN1)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
132021153 (GEN1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
XPG_I
Chromo_2
XPG_N
Chromo_SEND1
SpoU_methylas_C
Motif
Other DBs
NCBI-GeneID:
132021153
NCBI-ProteinID:
XP_059261166
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All DBs
Position
7:12705744..12738910
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AA seq
907 aa
AA seq
DB search
MGVNDLWPILEPVKQHLQLHNLCGKTIAVDLSLWVCEAQTVKKMIGTVMKPHLRNLFFRI
SCLTLMDVKLVFVMEGEPPKLKADVISRRNQIRYGPSGKTWSQRTGRSHFKSVLKECLDM
LDCLGIPWVQAAGEAEAMCAYLNASGYVDGCLTDDGDAFLYGAQTVYRNFTMNTKDPHVD
CYTMSSIESKLGLDRDALVGLAILLGCDYLPKGVPGVGKERALKLIQTLKGQSLLQRFTQ
WNEESPSDPQPLAIKTPAHCSVCSHPGSSKDHVRNGCRLCKTNQYCKPHDHEYCCPCEWH
STGHGRQLSAIENSIKKKACSCEGFPFHEVIQEFLLNKDKLVKVIRYRRPDLLLFQRFTL
EKMEWPNHYACEKLLVLLTHYDMIERKLGRRNSNQLHPIRIVKTRKRNGIHCFEIEWERP
EHYAVEDKHGELVLQTIEEESLFEAAYPEIVAVYQKQNLALKGKKQKSMKIKSKENSWPE
SDNVMGFQSQMTLNPTCEVFSVPNSNLNLEIIPDCALPQKSISASLNSLILPEDTPCLNT
QEHLMSSPRPLTMQQVTTVSKSLLPEASQPRTSSHNISAIADLQLSTIDWEGTSFTNSPA
IPRNTSPRGLKSELETAIPENFKSFPEELSCKSEWGTTNINKVLDQDLQKANPEEHLLSG
ITHLHLQDLPLKERIRIKSSYPQDNAQPNVDLKTPSLSTTKESFIAKSGSDCPSHPSKDL
LGIHLQNESRQSKVIKGDQLFQENYKVNTSKSYFVNNPVVKTSSVRVGPSNTALDHSRKG
DVQTTQKSVMKKSVCLDRHSSDEESVPVFEKAKNTTQKMKPSSQQHNPAAFKKDGANKLN
NSKIYIKETEQCVQAYKAAGNEEDCFPDATKGSLNFLQCHKDRGDSGTSLDSLLPLRERL
KLRFQNS
NT seq
2724 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtgaatgacttatggccaattttggagcctgtaaagcagcacctccagttgcat
aatctctgtgggaaaaccattgcagttgatctgagtctctgggtatgtgaagcacagaca
gtcaaaaaaatgattggaaccgtcatgaagccccacctcaggaacttattttttcgtatc
tcctgtttaacactgatggatgtaaaactggtgttcgttatggaaggggagcccccaaag
ctgaaagctgatgtcataagcaggaggaatcagattcgatatgggccttcaggaaaaaca
tggtctcagagaacagggagatcacattttaaatcagttttaaaagagtgcctcgatatg
ctggattgcttaggaattccctgggtccaagctgctggggaagcggaagccatgtgtgct
tatcttaatgccagtggttacgtagacggctgcctcactgatgatggggatgctttcctc
tatggcgcccagactgtttataggaatttcactatgaataccaaggatccacatgttgat
tgttatacaatgtcgtctattgagagtaaactaggtttagatagagatgctctggttgga
ctagctatactactgggctgtgattatcttccaaagggagtccctggagttggcaaagag
cgagcattaaagcttatacagactttgaaagggcaaagtctacttcaaaggtttactcag
tggaatgaagaatcaccctctgatccacaaccactagctattaaaacaccggcccattgt
tctgtgtgttcccatccaggttcatctaaggatcatgtacgtaatggatgcagactctgt
aaaactaatcagtattgtaagccgcatgatcatgaatactgctgtccttgtgagtggcac
agcacagggcatggcagacaactgagcgccatagagaacagcattaagaaaaaagcttgc
agttgtgagggattcccattccatgaggttattcaagaattccttctgaacaaggataaa
ttggtgaaagtaatcaggtaccgaagacctgatttattgttgtttcagagatttactctt
gaaaaaatggaatggcccaatcactatgcatgtgagaaattgttagtgcttttgacccac
tatgacatgatagaaagaaagcttggtagaaggaattctaatcaactacatccaattcga
atcgttaaaacgcggaaaagaaatggaattcattgctttgaaatagaatgggaaaggcct
gagcattatgctgtggaggataaacatggagaattggttctacaaacaatagaagaagaa
tcattgtttgaagcagcttatcctgagattgttgctgtttatcaaaaacaaaacttagca
ctgaaagggaagaaacaaaaaagcatgaaaattaagtctaaagaaaacagttggccagaa
tcagataatgtgatgggtttccaatcacagatgactttaaaccccacatgtgaagtcttt
tctgtgccgaattccaacttaaatttggaaattatccctgattgtgcattaccccagaaa
tctatttctgcatcattgaatagcttgattttacctgaagatactccctgtttgaataca
caagagcatttaatgtcttctccaagacctttgactatgcagcaagttacaactgtcagt
aagtctctacttccagaagctagtcaacctaggacttcatcccataacatatcagcgatt
gctgatctacaattaagcaccattgactgggaaggtacttcttttactaattcaccagct
attccaaggaacacttcccctcgtggtttaaaatcagaacttgaaacagccatccctgaa
aattttaaaagtttcccagaagaattatcatgtaaatcagaatggggtaccacaaacatt
aataaagtgttggatcaggatcttcaaaaggctaatcctgaagagcatctactttctggc
attactcatttacatcttcaggatttgcctttaaaggaacgaatacgtataaaatcatcc
tatcctcaggataatgcacaaccaaatgttgacctgaaaactccgtccctaagtaccaca
aaagaatcttttattgctaagagtggttctgattgtccatcacatccttcaaaggatctt
ctaggaattcatttgcaaaatgaatctagacaatctaaagttataaaaggagatcagcta
tttcaagaaaactataaagtgaatacttctaaatcttactttgtcaacaacccagtagta
aagacctccagtgttagagttggaccatcaaatactgctttagatcatagtagaaaaggt
gatgtgcaaaccactcagaaaagtgtaatgaagaaaagcgtttgccttgacagacattcc
tctgatgaagagagtgtcccagtgtttgagaaagctaaaaacacaactcagaaaatgaag
cccagttctcagcagcataacccagccgcattcaagaaggatggtgccaacaagttgaat
aactctaaaatatatattaaagaaactgaacagtgtgtccaggcttataaagcagctgga
aatgaagaggactgtttcccagatgccactaaaggttctctgaattttctacagtgtcat
aaggacagaggtgactctggaacttctctggatagtcttcttcctttaagggaaagatta
aaactaaggttccaaaattcttga
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