Mustela nigripes (black-footed ferret): 132021159
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Entry
132021159 CDS
T09425
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04512
ECM-receptor interaction
mnp04514
Cell adhesion molecule (CAM) interaction
mnp04820
Cytoskeleton in muscle cells
mnp05144
Malaria
mnp05205
Proteoglycans in cancer
mnp05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132021159 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
132021159 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132021159 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
132021159 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
132021159 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
132021159 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132021159 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
mnp04090
]
132021159 (SDC1)
00535 Proteoglycans [BR:
mnp00535
]
132021159 (SDC1)
Membrane trafficking [BR:
mnp04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
132021159 (SDC1)
CD molecules [BR:
mnp04090
]
Proteins
132021159 (SDC1)
Proteoglycans [BR:
mnp00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
132021159 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syndecan
Romo1
Glycophorin_A
Motif
Other DBs
NCBI-GeneID:
132021159
NCBI-ProteinID:
XP_059261175
LinkDB
All DBs
Position
7:complement(14711071..14734887)
Genome browser
AA seq
305 aa
AA seq
DB search
MRRAALWLWLCALALRLQPALPQTVAINVPPEDQDGSGDDSDNFSGSGAGALPDTTLSQQ
SPSTWKDVGLLTAMPTAPEPTGADNPTVSTSVLPTGEAPEEREAVLLAKVEPGFADREEE
TTHPPGETTLHPTTHRASTVRATTAAGPATSHPHRDMQPEHHEPSAGPRRLDPHTPHVED
RGPSATERAAEDGVSTQLPVGEGSGEQDFTFDLSGENVAGTAVEPDKRNQPPVDREASQG
LLDRKEVLGGVIAGGLVGLILAVCLVGFMLYRMKKKDEGSYSLEEPKQANGGAYQKPSKQ
EEFYA
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgcgcggcgctctggctctggctgtgcgcgctggcgctgcgcctgcagccggct
ctcccgcaaactgtggccataaacgtgccccctgaagatcaggacggctctggggatgac
tctgacaacttctctggctctggtgcaggtgctctgccagataccaccttgtcgcagcag
agcccgtccacgtggaaggacgtggggctcctgacagccatgcccacggctccagagccc
actggtgcagataaccccacggtctccacctccgtcctgcccacgggagaggctcccgag
gagagggaggccgtgctcctggccaaggtggagcctggcttcgccgaccgggaggaggag
accacacacccacccggtgagaccacgctgcacccgaccactcaccgggcctcgaccgtg
agagccaccacggccgcggggccggctacctcccatccgcacagggacatgcagcctgag
caccatgagccctcggcgggacccagacggctcgaccctcacactccccatgtggaggac
agaggtccttctgccaccgagagggccgcggaggacggagtgtccactcagctcccagta
ggcgagggctctggggagcaggacttcacctttgacctgtccggggagaacgtggccggg
acggcggtggagcccgacaagcggaatcaacccccagtggaccgtgaggcctcccagggc
ctcctggacaggaaggaagtgctgggaggggtcatcgctggaggcctcgtggggctcatc
ttggccgtgtgcctggtgggtttcatgctctaccggatgaagaagaaggacgagggcagc
tactccttggaggagcccaaacaagccaatggcggagcctaccagaagcccagcaagcag
gaggagttctacgcctga
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integrated database retrieval system