Mustela nigripes (black-footed ferret): 132021474
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Entry
132021474 CDS
T09425
Symbol
TIA1
Name
(RefSeq) cytotoxic granule associated RNA binding protein TIA1 isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132021474 (TIA1)
03041 Spliceosome [BR:
mnp03041
]
132021474 (TIA1)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
132021474 (TIA1)
Spliceosome [BR:
mnp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
132021474 (TIA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
RRM_Nup35
RRM_3
Calcipressin
Motif
Other DBs
NCBI-GeneID:
132021474
NCBI-ProteinID:
XP_059261887
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All DBs
Position
7:53129926..53164453
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AA seq
397 aa
AA seq
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MSNNEDNLSFLRPVYKSRYVGNLSRDVTEALILQLFSQIGPCKNCKMIMDVRTAGNDPYC
FVEFYEHRHAAAALAAMNGRKIMGKEVKVNWATTPSSQKKDTSSSTVVSTQRSQDHFHVF
VGDLSPEITTEDIKAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGG
QWLGGRQIRTNWATRKPPAPKSTYESNTKQLSYDEVVNQSSPSNCTVYCGGVTSGLTEQL
MRQTFSPFGQIMEIRVFPDKGYSFVRFNSHESAAHAIVSVNGTTIEGHVVKCYWGKETLD
MINPVQQQNQIGYPQAYGQWGQWYGNAQQIGQYMPNGWQVPAYGMYGQAWNQQGFNQTQS
SAPWMGPNYGVPPPPGQNGSMLPNQPAGYRVAGYETQ
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaataatgaagacaacctcagctttctcaggccagtctacaaaagcagatatgtc
ggcaacctttccagagatgtgacagaagctctaattctccagctgtttagccagattgga
ccttgtaaaaactgcaaaatgattatggatgtaaggacagctggaaatgatccatattgt
tttgtggagttttatgagcatcgtcatgcagctgcagcactggctgctatgaatgggcgg
aagataatgggtaaggaagtcaaagtgaattgggcaacaacccccagcagtcaaaagaaa
gatacaagcagtagtaccgttgtcagcacacagcgttcacaagatcatttccatgtcttt
gttggtgatctcagtccagaaattacaactgaagatataaaagctgcttttgcaccattt
ggaagaatatcagatgcccgagtggtaaaagacatggcaacaggaaagtctaaaggatat
ggctttgtctcctttttcaacaaatgggatgccgaaaacgccattcaacagatgggtggc
caatggcttggtggaagacaaatcagaactaactgggcaacccgaaagcctccagctcca
aagagtacatatgagtcaaacaccaaacagctatcatatgatgaagttgtaaatcagtct
agtccgagcaactgtactgtatactgtggaggtgtcacttctgggctgacagaacaacta
atgcgtcagactttttcaccatttggacaaataatggaaattcgagtctttccagataaa
ggatattcatttgttcggttcaattcccatgaaagtgcagcacatgcaattgtttctgtt
aatggaactaccattgaaggtcatgtggtgaaatgctattgggggaaagaaactcttgat
atgataaatcctgtgcaacagcagaatcaaattggatatccacaagcttatggccagtgg
ggccagtggtatggaaatgcacaacaaattggccagtatatgcctaatggttggcaagta
cctgcatatggaatgtatggccaagcatggaatcagcagggatttaatcagacacagtct
tccgcaccgtggatgggaccaaattatggagtgccgccacctccaggacagaatggcagc
atgttgcctaatcagcctgcagggtaccgagtggcagggtatgaaacccagtga
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