Mustela nigripes (black-footed ferret): 132021477
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Entry
132021477 CDS
T09425
Symbol
PCBP1
Name
(RefSeq) poly(rC)-binding protein 1
KO
K12889
poly(rC)-binding protein 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03040
Spliceosome
mnp04216
Ferroptosis
mnp04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132021477 (PCBP1)
09140 Cellular Processes
09143 Cell growth and death
04216 Ferroptosis
132021477 (PCBP1)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
132021477 (PCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132021477 (PCBP1)
03041 Spliceosome [BR:
mnp03041
]
132021477 (PCBP1)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132021477 (PCBP1)
Spliceosome [BR:
mnp03041
]
Common components
Common spliceosomal components
hnRNP proteins
132021477 (PCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
Bac_chlorC
Motif
Other DBs
NCBI-GeneID:
132021477
NCBI-ProteinID:
XP_059261904
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All DBs
Position
7:complement(53273046..53274675)
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AA seq
356 aa
AA seq
DB search
MDAGVTESGLNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEGNCPERIIT
LTGPTNAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKI
KEIRESTGAQVQVAGDMLPNSTERAITIAGVPQSVTECVKQICLVMLETLSQSPQGRVMT
IPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSIQGQHTISPLDLAKLNQ
VARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDASTQTTHELTIPNNLIGCIIGRQGA
NINEIRQMSGAQIKIANPVEGSSGRQVTITGSAASISLAQYLINARLSSEKGMGCS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggatgccggtgtgactgaaagtggactaaatgtgactctcaccattcggctgcttatg
cacggaaaggaagtaggaagcatcattgggaagaaaggggagtcggttaagaggatccgc
gaggagagtggcgcgcggatcaacatttcggaggggaattgtccggagagaatcatcact
ctgaccggccctaccaatgccatctttaaggccttcgctatgatcatcgataagctggaa
gaagatatcaacagctccatgaccaacagcacggcggccagcaggcccccggtcaccctg
aggctggtggtgccggccacccagtgcggctccctgattgggaaaggcgggtgtaagatc
aaagagatccgcgagagtacgggggcccaggtccaggtggcgggggatatgctgcccaac
tccactgagcgggccatcaccattgctggcgtgccgcagtctgtcaccgagtgtgtcaag
cagatctgcctggtcatgctggagacgctctcccagtctccgcaagggagagtcatgacc
attccgtaccagcccatgccggccagctctccagtcatctgcgcgggcggccaagatcgg
tgcagcgacgctgcgggctacccccatgccacccatgacctggagggaccacctctagat
gcctactcgattcaaggacaacacaccatttctccgctcgatctggccaagctgaaccag
gtggcaagacaacagtctcactttgccatgatgcacggcgggaccggattcgccggaatt
gactccagctctccagaggtgaaaggctattgggcaagtttggatgcatctactcaaacc
acccatgaactcaccattccaaataacttaattggctgcataatcgggcgccaaggcgcc
aacattaatgagatccgccagatgtccggggcccagatcaaaattgccaatcccgtggaa
ggctcctctggtaggcaggttactatcactggttctgctgccagtattagtctggcccag
tatctaatcaatgccaggctttcctccgagaagggcatggggtgcagctag
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