Mustela nigripes (black-footed ferret): 132021507
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Entry
132021507 CDS
T09425
Symbol
VPS54
Name
(RefSeq) vacuolar protein sorting-associated protein 54 isoform X1
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mnp01009
]
132021507 (VPS54)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mnp04131
]
132021507 (VPS54)
Protein phosphatases and associated proteins [BR:
mnp01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
132021507 (VPS54)
Membrane trafficking [BR:
mnp04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
132021507 (VPS54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
SBP_bac_6
YqzH
Motif
Other DBs
NCBI-GeneID:
132021507
NCBI-ProteinID:
XP_059261956
LinkDB
All DBs
Position
7:58571242..58668736
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AA seq
977 aa
AA seq
DB search
MASSHSSSPVPQGSSSDVFFKKEVDPTKHIRPVQSLPDVCPKEPTGDSNSLCVAPSLVTD
QHRWTIYHSKVNLPAALNDPRLAKRESDFFTKTWGLDFVDTEVIPSFYLPQISKEHFTVY
QQEISQREKIHERCKNICPPKDTFDRTLLHTHDKSRTDLEQVPKIFMKPDFALDDSLTFN
SVLPWSHFNTAGGKGNRDAASSKLLQEKLSHYLDIVEVNIAHQISLRSEAFFHAMTSQHE
LQDYLKKTSQAVKMLRDKIAQIDKVMCEGSLHILRLALTRNNCVKVYNKLKLMATVHQTQ
PTVQVLLSTSEFVGALDLIATTQEVLQQELQGIHSFRHLGSQLCELEKLIDKMMIAEFST
YSHSDLNRPLEDDCQILEEERLVSLVFGLLKQRKLNFLEIYSEEMIITAKNIIKQCVINK
VSQIEEIDTDVVMKLADQMRMLNFPQWFDLLKEIFSKFTIFLQRVKVTLNIIHSVVLSVL
DKNRRTRELEEISQQKNATKDNSLDTEVAYLIHEGMFISDAFSENELTPIAIDTTSQRNA
SPNSEPCSSDSVSEPECTTDSSSSKEQTSSSATPGGVDIMINEDMKLTDLELEKLANNIQ
ELLYSASDICHDRAVKFLMSRAKDGFLEKLNSTEFITLSRLMETFILDTEQICGRKSMSL
LGALQSQANKFVNRFHEERKTKLSLLLDNERWKQADVPAEFQDLVDSISDGKIALPEKKS
GATEERKPAEVLIVEGQQYAVVGTVLLLIRIILEYCQCVDNIPSVTTDMLTRLSDLLKYF
NSRSCQLVLGAGALQVVGLKTITTKNLALSSRCLQLIVHYIPVIRAHFEARLQPKQYSML
RHFDHITKDYHDHIAEISAKLVAIMDSLFDKLLSKYEVKAPVPSACFRNICKQMAKMHEA
IFDLLPEEQTQMLFLRINASYKLHLKKQLSHLNVINDGGPQNGLVTADVAFYTGNLQALK
GLKDLDLNMSEIWEQKR
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggcttcaagccacagttcttcaccagtgcctcaaggaagcagcagtgatgttttcttt
aaaaaagaggtagatccaacaaaacacattcgacctgtgcagtcactgccagatgtatgt
cccaaggaacccacaggtgattcaaatagtttatgtgttgccccatctctagttacagat
caacatagatggactatatatcattccaaagtaaacctcccagcagcattaaatgatcct
cgattagcaaaaagagaatctgacttcttcacaaaaacatggggattggactttgtggac
actgaagtcataccttcattctacctcccacagatcagcaaggaacattttacagtttat
caacaggaaatctctcagagagagaagattcatgagagatgcaagaatatttgtcctcct
aaagatacctttgacaggactctcttacatactcatgataaatccaggacagatctggag
caagtacctaagatttttatgaaaccagattttgccttggacgattccttaacttttaat
tcagttttaccatggtctcattttaatactgctggtggaaaaggaaatcgtgatgcagct
tcctcaaagttgctacaagaaaagctgagccattatctggatattgtggaagtaaacatt
gctcaccagatctctctacgttctgaagcattttttcatgcaatgacctctcaacacgaa
ttgcaggactacctcaagaaaacttcccaggctgtaaagatgcttcgagataagattgca
cagattgataaagtaatgtgtgaaggatcactacacattttaagactggcacttaccaga
aacaattgtgttaaagtgtacaataaactcaagttaatggccactgtacaccagactcag
cctacagtgcaggtgttgttatccacttctgagtttgttggagctttggacttaatagca
acaacacaggaggttctacagcaggagcttcagggcattcacagcttccggcatttggga
tcacaactttgtgaattagaaaaactgatagataaaatgatgattgcagaattttctact
tattctcacagtgacttaaacagaccactggaagatgattgtcaaattttagaagaggaa
agacttgtatcccttgtgtttggacttttaaaacaaagaaaacttaactttttagaaatc
tatagtgaagaaatgattattacagcaaaaaatatcattaaacagtgtgtgattaataaa
gtttcacaaatagaagaaattgacacagatgttgttatgaagcttgcagatcagatgaga
atgttgaattttcctcagtggtttgatctgctaaaggagattttctctaagtttacaatt
ttcctacaaagagttaaggtaacgttaaatatcattcacagtgttgttctctcagttctt
gacaaaaaccgaaggaccagagaattggaggagatttcacaacagaagaatgctacaaaa
gacaattcactggacacagaggtggcttatttaatccatgaaggcatgtttataagtgat
gcattcagtgagaatgaattaacacctatagcaatcgacactacctctcaaagaaatgca
tctccaaatagtgagccctgcagcagtgattcagtatctgaaccagaatgtactactgat
tcttcatccagcaaagagcagacatcatcatctgctactccaggaggtgtggatattatg
atcaatgaagacatgaaattaactgatttagagctagaaaaactggcaaataatatccag
gagttattgtatagtgcttcagatatatgtcatgaccgagctgtcaaatttctcatgtca
agagcaaaggatggttttcttgagaagctaaattccacggaattcataacactttctaga
ttaatggaaacattcattttagatactgaacagatctgtggaagaaaaagtatgtcgtta
cttggagcacttcagagccaagctaataaatttgtaaacaggtttcatgaagagagaaaa
actaagctcagcctcctcttagacaatgagcgctggaaacaagctgatgttcctgcagaa
tttcaggatcttgttgattctatatcagatggaaagattgctttacctgaaaaaaagtca
ggggctacagaagaaaggaaaccagcggaagttctcattgtcgagggacaacagtatgct
gtcgttggaactgtattgctgttgataagaattatccttgaatattgccagtgtgtagac
aatatcccatctgttactactgacatgcttactcgtctatcagatttattgaagtacttc
aattcaagaagttgccagttagttcttggagctggtgcactgcaagttgttggactaaaa
acaataactacaaaaaatttggctctttcttcacgttgtttgcagttaattgtgcactac
attcctgtgatcagggctcattttgaagctcgactgcaacctaagcagtatagcatgctt
aggcattttgatcatatcactaaggactaccatgaccacattgctgaaatatcagccaag
cttgtagcgataatggatagcttatttgacaagctattatctaagtacgaggtgaaagct
cccgttccttctgcctgtttcaggaatatttgtaagcaaatggcaaaaatgcatgaagct
atatttgatcttcttccagaagaacaaacacaaatgttatttttaagaattaatgcaagt
tataaactccacttgaaaaagcagttatctcatttaaatgtgataaatgatggaggacct
caaaatgggttggtcacagcagatgtagctttttacactggaaatcttcaagccttaaaa
ggtcttaaagatttggacctaaatatgtccgagatctgggaacagaagaggtga
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