Mustela nigripes (black-footed ferret): 132021878
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Entry
132021878 CDS
T09425
Symbol
RBM39
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnp03041
]
132021878 (RBM39)
Spliceosome [BR:
mnp03041
]
Common components
Common spliceosomal components
General mRNP proteins
132021878 (RBM39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
132021878
NCBI-ProteinID:
XP_059262892
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All DBs
Position
7:complement(117765065..117796002)
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AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggctccttacaagaaggatgagaac
aagttgagcagtgctaacggccatgaagaacgtagcaaaaagaggaaaaaaagcaagagc
agaagtcgtagtcatgaacggaaaagaagcaaaagtaaggaacggaaacgaagtagagat
agagaaaggaaaaagagcaaaagccgagaaaggaagcgaagtaggagcaaagaaaggagg
cggagccgctcaagaagtcgagatcgcagattcagaggccgctacagaagtccttactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagacgacgttcccgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaagaaagagatgcaaggacagttttctgcatgcagctg
gcagcaagaattaggccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgagaatgatttctgatagaaattcaagacgttccaaaggaattgcatatgtggag
tttgttgatgttagctcagtgcctctagcaataggattaactggccaacgtgttttagga
gtgccaatcatagtacaagcatcacaggcagaaaaaaacagagctgcagcaatggcgaac
aatctacagaagggaagtgctggacctatgaggctttatgtgggctcgttacactttaac
ataactgaagatatgcttcggggaatctttgagccttttggaaggattgaaagtatccag
ctcatgatggatagtgaaacaggtcgatctaagggatatggatttattacgttttctgat
tcagaatgtgccaagaaggctttggaacagcttaatggatttgagttagcaggaagacca
atgaaagttggtcatgttactgaacgtactgatgcttctagtgctagctcattcttggac
agtgatgaactggaaaggactggaattgacttgggaacaactggtcgtctccaattaatg
gcaagacttgcagaaggtacaggtttgcagattccaccagcagcacagcaggctctacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acaagactttctcaacagactgaagcttcagctttagctgcagctgcctctgttcagcct
cttgcaacacagtgtttccaactttctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaggatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaacgtgtatgtgaagtgcccatca
attgctgcagccattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcatatgtacctcttccaacttatcacaacctcttccctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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