Mustela nigripes (black-footed ferret): 132022007
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Entry
132022007 CDS
T09425
Symbol
DDX27
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mnp03041
]
132022007 (DDX27)
03009 Ribosome biogenesis [BR:
mnp03009
]
132022007 (DDX27)
Enzymes [BR:
mnp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
132022007 (DDX27)
Spliceosome [BR:
mnp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
132022007 (DDX27)
Ribosome biogenesis [BR:
mnp03009
]
Eukaryotic type
Pre-60S particles
Helicases
132022007 (DDX27)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_22
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
132022007
NCBI-ProteinID:
XP_059263187
LinkDB
All DBs
Position
7:128910097..128929231
Genome browser
AA seq
764 aa
AA seq
DB search
MLEELGLIGTIGEDDEVPGDPESDSGDEEEEGPIVLGRKQKALQKNRSADFNPDFVFTEK
EGAYDGSWAMADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAKSGKSEEKEAKEGSEP
DEQEDPDGKDEGGPEEEDSETDYSSAEENILTKADTLKVKERKKKKKKGQETGGFFEDAS
QYDENLSFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAF
ALPVLERLIYKPRQAPVTRVLILVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQ
EAALRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMC
SHHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREA
IVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDE
QIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVGEEER
KMLKEIVKAAKAPVKARILPQDVILKFRDKIEKMEKDVYAVLQLEAEEKELQQSEAQINT
AKRLLEKGKEAPNHEPERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKDAKKKG
EMTAEERSQFEILKAQMFAERLAKRNRRAKRARAMPEEEPARGPAKKHKQVKKSVFDEEL
TNTSKKALKQYRAGPSFEERKQLGLPHQRRGGNFKSKSRYKRRK
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaggagctgggtttaatcgggaccataggtgaagatgacgaggtgccgggggat
cctgagtctgactccggggacgaggaggaggagggccccatcgtgctgggcagaaagcag
aaagccttgcagaagaaccgcagcgccgatttcaaccctgacttcgttttcactgagaaa
gagggggcatacgatggcagctgggccatggctgatgtcatgagtcagctcaagaagaag
agggcagccactacattagatgagaagattgagaaagttcgcaagaaaaggaaaacagag
gataaagaagccaagtctgggaagtcagaggagaaagaagcaaaggaaggctcggaacca
gacgagcaggaagaccctgacgggaaagacgagggcgggccagaagaggaagactccgag
accgattactcgtccgctgaagagaacatcctcaccaaagcagatacactcaaagtaaag
gagcggaagaagaagaagaagaagggacaggaaacaggaggattttttgaagatgcttct
cagtatgatgaaaacctctctttccaggacatgaacctttcccgccctcttctgaaggcc
attacagccatgggcttcaagcagcccaccccaatccagaaggcatgcatacctgtgggt
ctgttggggaaggatatctgtgcctgtgcagccactgggacaggtaagactgctgctttt
gccctgcctgtcttggagcggctgatctacaaaccccgccaggctcctgtcacgcgcgtg
ctcattctggttcccacccgagagctgggcatccaggtgcactcagtcaccaagcagctg
gctcagttctgcagcatcaccacctgcctggccgtgggaggcctggacgtgaagtctcag
gaagcagctctgagggcggcgcctgacatcctcatcgccaccccaggccggctcatcgac
cacctgcacaactgcccttccttccacctgagcagtattgaggtgctcatcctggatgag
gctgacaggatgctggatgagtactttgaggaacagatgaaggaaattatccggatgtgt
tcccaccaccgccagaccatgctcttctcggccaccatgacggacgaggtaaaagatctg
gcttctgtttccttgaagaatcctgtccgaatatttgtaaatagcaacacggatgtggcc
cccttcctgcggcaggagttcatccggatccggccgaatcgggaaggggaccgggaagcc
atcgtggcagctctgctgacaaggaccttcactgaccacgtgatgctcttcacccagacc
aagaagcaggcccaccgcatgcacatccttctggggctcatggggctgcaggtgggcgag
ctccacggcaacctatcacagacgcagcggctggaggccctccggcgctttaaggacgaa
cagattgacatccttgtggccacagatgtagcagcccgtggacttgacattgagggggtt
aaaacggtaattaacttcacaatgcccaataccatcaagcattatgtccaccgggtaggg
cgaacagcgcgggctggtcgggctgggcgctcggtgtctctggtgggagaagaggagcgg
aagatgttgaaggagattgtaaaagccgccaaggcccccgtgaaggcacggatacttcct
caagatgtcatcctcaaattccgggacaagattgagaagatggagaaggacgtgtatgca
gttctacagctcgaggccgaggagaaagagctccagcagtcggaagcccagatcaacaca
gcaaagcggctcctggagaaggggaaggaggcaccgaaccacgagcctgagaggagctgg
ttccagaccaaggaagagaggaagaaggaaaaaattgccaaggctctgcaggagtttgac
ttggccttaagaggaaagaagaagaggaagaagtttatgaaggatgccaagaaaaagggg
gagatgacagcagaggagaggtcccagtttgaaatcctcaaggcgcagatgtttgctgag
cggctggccaagaggaatcgcagagccaagagggcccgagcaatgcctgaggaggagcca
gcaagaggccctgccaagaaacacaagcaggtgaagaaatctgtatttgatgaagaactt
accaacacgagcaagaaggccctgaaacagtatcgagctggcccctcctttgaagaaagg
aaacagttgggcttgccccaccagagacgaggaggaaacttcaagtctaaatccaggtac
aagcggaggaagtag
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