KEGG   Mustela nigripes (black-footed ferret): 132022048
Entry
132022048         CDS       T09425                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor RAE1
  KO
K14298  mRNA export factor
Organism
mnp  Mustela nigripes (black-footed ferret)
Pathway
mnp03013  Nucleocytoplasmic transport
mnp05014  Amyotrophic lateral sclerosis
mnp05164  Influenza A
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    132022048 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    132022048 (RAE1)
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    132022048 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mnp03019]
    132022048 (RAE1)
   03036 Chromosome and associated proteins [BR:mnp03036]
    132022048 (RAE1)
Messenger RNA biogenesis [BR:mnp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     132022048 (RAE1)
Chromosome and associated proteins [BR:mnp03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    132022048 (RAE1)
SSDB
Motif
Pfam: Beta-prop_EML_2 WD40 WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_RIG_2nd Beta-prop_TEP1_C WD40_RFWD3 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_Nup120_160 WDR90_beta-prop_4th Beta-prop_SPT8
Other DBs
NCBI-GeneID: 132022048
NCBI-ProteinID: XP_059263266
LinkDB
Position
7:135334965..135355283
AA seq 368 aa
MSLFGTTSGFGTSGTSMFGSTSTDNHNPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAG
SWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTVHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIY
PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPIAACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttgggacaacctcgggttttggaactagtgggaccagcatgtttggcagc
acaagcacagataaccacaaccctatgaaggatattgaagtaacatcctctcctgatgac
agcattggttgtctgtcctttagcccaccaaccttgcctgggaacttccttatcgcagga
tcatgggctaacgatgttcgctgctgggaagttcaagatagtggacagactattccaaaa
gcccagcagatgcacacagggcctgtcttagatgtctgctggagcgatgatgggagcaaa
gtatttacagcatcatgtgataaaactgccaaaatgtgggacctcaacagcaatcaggca
atacagattgcacagcacgatgcccccgtgaagaccgtacactggatcaaagcgcctaac
tacagctgcgtgatgaccgggagttgggataagactctgaagttttgggatacacgatca
tcaaatcctatgatggttctgcagctccctgaaagatgttactgtgccgatgtgatctac
cctatggctgtggtggccactgcagagagaggactgattgtctaccagttagagaaccaa
ccatccgagttcaggaggatagagtctccactgaagcatcagcatcgatgtgtggctatt
tttaaagacaaacagaacaagccgactggtttcgccctgggaagcatcgaggggagggtt
gctattcactacatcaaccccccaaatcccgccaaagataactttaccttcaaatgtcac
cgctcgaacggaaccaatacctcagctcctcaggacatctatgcggtaaatgggatcgcg
ttccatcctgtccacggcacgcttgccacggtggggtccgatggcagattcagcttttgg
gacaaagatgccaggacgaaactaaaaacttccgaacagctggaccagccgatagcggct
tgctgcttcaatcacaacggaaacatattcgcctacgcctccagctacgactggtcaaag
ggacacgaattttataatccccaaaagaaaaattacattttcctgcgtaatgcagccgaa
gagctaaaacccaggaataagaaatag

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