Mustela nigripes (black-footed ferret): 132022083
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Entry
132022083 CDS
T09425
Symbol
SS18L1
Name
(RefSeq) calcium-responsive transactivator isoform X1
KO
K15623
protein SSXT
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03082
ATP-dependent chromatin remodeling
mnp05202
Transcriptional misregulation in cancer
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
132022083 (SS18L1)
09160 Human Diseases
09161 Cancer: overview
05202 Transcriptional misregulation in cancer
132022083 (SS18L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
132022083 (SS18L1)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
132022083 (SS18L1)
GBAF(ncBAF) complex
132022083 (SS18L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSXT
Motif
Other DBs
NCBI-GeneID:
132022083
NCBI-ProteinID:
XP_059263336
LinkDB
All DBs
Position
7:139024488..139050711
Genome browser
AA seq
404 aa
AA seq
DB search
MSVAFASARPRGKGEVTQQTIQKMLDENHHLIQCILDYQSKGKTAECAQYQQILHRNLVY
LATIADSNQNMQSLLPAPPTQNMNLGPGALSQSGSSQSLHSQGSLSDAVGTGLPPSSLMQ
GQIGNGPNHVSMQQTAQSTLPTTSMSMSGSGHGSGPGYSHSGPTSQSVPLQGQGAIGNYV
SRANINMQSNPVSMMHQQAASSHYNSAQGGSQHYQGQSSIAMMGQSGQGSTMMGQRPMAP
YRPSQQGSSQQYLGQEEYYGGEQYGHSQAASEPMSQQYYPDGHGDYAYQQSSYTEQSYDR
SFEESTQHYYEGGNSQYGQQPAGYQQGAAQPQAGYQQQYSNQQTYPGQQQGYGPAQGAAS
QYSGYQQGQGQQYGSYRASQTGPSAQQQRPYGYEQARPGASVET
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtggccttcgcgtccgcccggccgcgaggcaaaggggaggtcacgcagcagacc
atccagaagatgctggatgagaaccaccatctgatccagtgcattctggactaccagagc
aagggcaagacggccgagtgcgcccagtaccagcagatcctgcaccggaacctggtctac
ctggccacgatcgcagactccaaccagaacatgcagtccctgctccccgccccgccaacc
cagaacatgaacctgggccccggagcgctgtcccagagcggctccagccagagcctgcac
tcccagggcagcctcagcgatgctgttggaacgggcctgcctccgtcctccctcatgcag
ggccagatcggcaacggtccaaaccacgtgtccatgcagcagacagcccaaagcacgctg
cccaccacctccatgagtatgtccggcagtggccatggctcggggcccggctacagccac
tcaggacccacctcacagagcgtgcccctgcagggccagggtgccatcggcaactacgtg
tcacgggccaacatcaacatgcagtccaacccagtgtccatgatgcaccagcaggcagcc
tcgtcccactacaactcggcgcagggcggcagccagcactaccagggccagtcatccatc
gccatgatgggccagagcggacagggcagcaccatgatgggccagcggcccatggcgccc
taccggccctcccagcaagggtcgtcccagcagtacctgggccaggaggagtactacggt
ggtgagcagtacggccacagccaggccgcctcggagcccatgagccagcagtactatccc
gatgggcatggcgactacgcctaccagcagtcgtcctacacggagcagagctacgaccgg
tcctttgaggagtccacacagcactactacgagggcggaaactcgcagtacggccagcag
ccggcggggtaccagcagggcgcagcccagccgcaggcagggtaccagcagcagtactcc
aaccagcagacctaccccgggcagcagcaaggctacgggccggcccagggagccgcctcg
cagtactccggctaccagcaaggacaaggccagcagtacggaagctacagggcatcccag
acgggcccgtccgcccagcagcagcggccttacggctatgagcaggcaagacccggcgcg
tccgtggagacatga
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integrated database retrieval system
