Mustela nigripes (black-footed ferret): 132022096
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Entry
132022096 CDS
T09425
Symbol
COL9A3
Name
(RefSeq) collagen alpha-3(IX) chain
KO
K08131
collagen type IX alpha
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04151
PI3K-Akt signaling pathway
mnp04510
Focal adhesion
mnp04512
ECM-receptor interaction
mnp04820
Cytoskeleton in muscle cells
mnp04974
Protein digestion and absorption
mnp05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132022096 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132022096 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132022096 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132022096 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132022096 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
132022096 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mnp00535
]
132022096 (COL9A3)
Proteoglycans [BR:
mnp00535
]
Extracellular matrix (ECM) proteoglycans
Others
132022096 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
132022096
NCBI-ProteinID:
XP_059263355
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Position
7:139512745..139529467
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AA seq
682 aa
AA seq
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MAGAATLVLLLLGQLLAATGSEAQKVGPQGPPGPQGPPGKPGKDGIDGEVGPPGLPGSPG
PKGAPGKPGKPGEAGLPGLPGVDGLTGQDGPPGPKGAPGERGSLGPPGPPGLGGKGLPGP
PGEAGESGVPGGMGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPAVCPPGP
PGPPGMPGFKGPPGYKGEQGEVGKDGEKGDPGPPGPAGIPGTVGQQGPRGLRGLPGPAGP
PGDRGPIGFRGPPGIPGAPGRVGDRGERGPEGFRGPKGDLGRPGPKGVPGVAGPGGEPGV
PGKDGRDGVPGLDGDKGESGRSGAPGEKGPNGLPGLPGRAGSKGEKGELGRAGELGEAGP
SGEPGVPGDVGVPGERGEAGHRGSAGALGPQGPPGAPGIRGFQGQKGSMGDPGLPGPQGL
RGGTGDRGPGGAAGPKGDQGVAGSDGFPGDKGDLGPGGAVGPKGESGSRGELGPKGIQGP
NGTSGVEGLPGPPGPMGFPGVQGLPGITGKPGVPGREASEQHIRELCGGMLGEQIAQLAA
HLRKPLAPGSAGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGAPGDRG
DRGAAGTGLDGPAGDQGLRGPQGVPGVSRDGRDGAHGEPGPPGDPGLRGAVGAQGTPGIC
DTSACQGAVMGGGGEKSGSRSS
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggccggagccgccacgctggtcctgctcctgctgggccagctcctggccgccaccggg
agcgaggcacagaaagtgggacctcaaggaccccctggcccccaagggccacctggaaag
ccaggcaaagatggcattgatggagaagttgggcctccgggtctgcctgggtccccggga
ccgaaaggggccccagggaagccggggaagccgggagaggctgggctgccgggactgcct
ggcgtggacggcctgaccggccaggatggaccgcccggccccaagggcgcgcctggagag
cggggaagtctgggacccccggggcctcccgggctggggggcaaaggcctccccggaccc
ccgggagaagcaggagagagtggcgtcccaggtggaatgggtctccggggccccccggga
ccctctggactacccggcctccctggccccccaggacctccaggaccccccggtcacccg
ggggtcctccctgaaggcgccaccgaccttcagtgcccagccgtctgccctcctggcccc
cccggccccccaggaatgccggggttcaagggaccccccggctacaaaggggagcaagga
gaggtcggcaaggacggcgagaagggcgatcctggcccccctgggcctgctggcatccca
ggcactgtggggcagcagggacctcggggacttcggggcctgccagggccggccggaccc
ccaggggatcggggtcccattggattccgagggccgccagggatcccaggagccccgggg
agagtgggtgacagaggcgagaggggccctgagggtttccgcggccccaagggtgacctt
ggcaggcctggtcccaaaggcgtccctggggtagcaggcccgggtggagagccgggtgtg
ccgggcaaggacggccgcgacggtgtgccggggctcgacggtgacaagggagagtctggt
cgcagcggtgccccaggagagaagggtcccaacgggctgccgggcctcccgggacgagca
gggtccaagggcgagaagggagaactgggccgcgctggcgagctgggagaggccggcccc
tcaggagagcccggcgtcccaggagacgttggcgtgcccggggagcgtggggaagctggc
cacaggggctcggcgggggctctgggcccacaaggccctcctggagcccctggtatccga
ggcttccagggccagaagggcagcatgggagaccctggcctgccgggcccccagggcctt
cgaggtggcaccggggaccggggcccaggaggagccgccggccctaagggagaccagggc
gtcgcaggttccgatggctttcctggggacaaaggagacctgggtcccggtggtgcggtc
ggacccaaaggagagtccggcagtcgaggggagctgggcccaaagggcatccagggtccc
aacggcaccagtggcgtcgagggcctcccaggcccgcccggccccatgggcttcccagga
gtacaaggcctgcctggcatcaccgggaagcccggagtcccggggcgagaagccagcgaa
cagcacatccgggagctgtgcggagggatgctcggtgaacaaatcgcacagttagctgcc
cacctgaggaagcctttagcgcccggatctgcaggccggcctggtccagcggggccccca
ggtcccccaggtcccccgggctccatcggccaccccggtgcccgagggccccctggatac
cgtggtcccaccggagagctgggagacccggggcccagaggggccccgggagacagagga
gacaggggtgcggcgggcacgggactggacgggccggctggggaccaggggctgcgagga
ccgcagggtgtgcctggcgtcagcagagacggccgggacggggcccacggcgagcccggg
cctccaggtgatcctggcctccgcggtgctgtcggcgctcaggggacccccggcatctgt
gacacctcagcctgccaaggagccgtgatgggaggcggcggggagaagtcaggttctaga
agttcctaa
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