Mustela nigripes (black-footed ferret): 132022255
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Entry
132022255 CDS
T09425
Symbol
TRIM54
Name
(RefSeq) LOW QUALITY PROTEIN: tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
132022255 (TRIM54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnp04121
]
132022255 (TRIM54)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
132022255 (TRIM54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4
RING_XB3-XBAT31
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
DUF349
Sina_RING
CoiA_N
MIF4G_like_2
DD_DDX21-DDX50
Zn_ribbon_FGT1_2
COG2_C
DUF5094
DUF1421
PIN_8
Tautomerase_3
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
132022255
NCBI-ProteinID:
XP_059263559
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All DBs
Position
7:21846497..21867760
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AA seq
366 aa
AA seq
DB search
MNFTVGFKPLLGDAHSMDNLEKQLICPICLEMFSKPVVILPCQHNLCRKCANDVFQASNP
LWQSRGSTTVSSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHSKA
EQHLMCEEHEEEKINIYCLSCEVPTCSLCKVFGAHKDCEVAPLPTIYKRQKSELSDGIAM
LVAGNDRVQAVITQMEEVCQTIEDNSRRQKQLLNQRFEALCSVLEERKAELLQALAREQE
EKLLRVRGLIRQYGDHLEASSKLVESAIQSMEEPQMALYLQQAKELINKVGAMSKVELAG
RPEPGYESMEQFTVSVEHVAEMLRTIDFQPGASGEDEDEEVALDGDEGGAGPEEERPEGP
EGTGGH
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcacagtgggtttcaagccgctgctaggggatgcacacagcatggacaacctg
gagaagcagctcatctgccccatctgcctggagatgttctccaaaccggtggtgatcctg
ccctgccagcacaacctatgccgcaagtgtgccaacgacgtcttccaggcctcgaaccct
ctatggcagtcccggggctccaccacggtgtcttcggggggccgtttccgctgcccatct
tgcaggcatgaggttgtcctggacagacatggtgtctatggcctgcagcgaaacctgcta
gtggagaacatcatcgacatttacaagcaggagtcttcccggccactgcactccaaggct
gagcagcacctcatgtgcgaggaacacgaagaggagaagatcaatatctactgcctgagc
tgtgaggtgcccacctgctccctctgtaaggtcttcggcgcccacaaggactgcgaggtg
gccccactgcccaccatttacaaacgccagaagagcgagctcagtgatggcatcgcaatg
ctggtggcaggcaacgaccgcgtgcaagcagtgatcacgcagatggaggaagtgtgtcag
accattgaggacaacagccggaggcaaaagcagttgctcaaccagaggttcgaggccctc
tgttcggtactggaggagcgcaaggcagagctgctgcaggcgctggcccgcgagcaggag
gagaagctgctgcgagtccggggcctcatccgccagtatggagaccacctggaagcttcc
tccaagctcgtggagtccgccatccagtccatggaggagccgcagatggcgctgtacctc
cagcaggccaaggagctgatcaataaggtcggggcgatgtcgaaagtggagctggcggga
cggcccgagccgggctacgagagcatggagcagttcaccgtgagcgtggagcacgtggcc
gaaatgctgaggaccatcgacttccagccgggcgcttccggggaggacgaggatgaggaa
gtggcactggacggggacgagggcggcgcggggccggaggaagagcggccggaggggccg
gaaggcacaggcgggcactga
DBGET
integrated database retrieval system
