Mustela nigripes (black-footed ferret): 132022467
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Entry
132022467 CDS
T09425
Symbol
COL20A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132022467 (COL20A1)
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Gene cluster
GFIT
Motif
Pfam:
VWA
fn3
VWA_2
Pur_ac_phosph_N
Collagen
VWA_3
Motif
Other DBs
NCBI-GeneID:
132022467
NCBI-ProteinID:
XP_059263699
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Position
7:139844258..139860465
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AA seq
949 aa
AA seq
DB search
MSALTRPHLGLCLWLWLGVALGLGQGQASSCLRLAVLPEHRLQTKWREAEGSGFGFLGQV
KPAAGDAEQEVVLTTKAPVGRLSPSKGYTVQIFKLTGSGNALLAQREFVPKSDLKSHATS
GSSRKPPEAAAEPTPSHAGSPGPEPRVAPSPGQDSPKTPANPQFCGTPPTPGDMLFLVDG
SWSVGHSHFQQVKDFLASIIEPFEIGPNKVQVGLTQYSGDPQTEWDLSAFRSKDKVLAAV
CSLRYKGGNTFTGLALTHVWEQNLKPGAGPRPEAAKVVVLVTDGKSQDDAHAAGRVLKDL
GVAVFAVGGQNADEAELRLLESPPLDITVHSVRDFPQLGTLAGLLSRLICQKVQGGSRGP
VSGHVAAFRGGPPQEVRGSLPAVDSVGATRVQPSCRTEGAVRVVRKREWKGGVGVRPRAT
CGCVVAEVTAQLWLLFRVVLDRPALSMTLHNLTVGPEYLVSVLPVGEAGVGKGLGGLVTT
APLPLPQALTLAAGTPTTVRLTWRPLARPRSTWCLLASLPEPPGGEAEEGACQQVQVGQP
EVLLDGLKPGTDYDVQVQSLQGPEKSISDPGPRNHLTLPDLLAATKYRVQVSAVYGARES
APVSATGRMSFHLVAGFGLVEQEHASLRGVAMERAASGCTRTFTLLKDARLTRWASGSQL
AAPPPEHTVVFLLRALPETPREAFALRQMKAEDLQPILGVLLDAGRKSLTYFNHDPRATL
QEVTFDLPEVKKIFFGSFHKVHVAVGHSKVRLYVDCQKVAERPIGEAGSPPATGFVMLGR
LAKARGPRSSSATLQLQLLHFVRRDSWXGKGVCCELPAAVEGWRDCLAFSSACTCSSQTP
GPPGPPGLPGRNGAPGEQGFPGPRDGPHAAHSDPAPPPQTRHRERLCGREEEAGAASPGG
DLGAEGGGETFPAEGLGPHPPQPVKAAPFPVLGRAQGRPPLDVEAHKGF
NT seq
2850 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccctcacacgcccccatcttgggctttgcctctggctgtggctgggtgtcgcc
ttgggacttggccagggacaagcgagcagctgcctgaggctggccgtgctgcccgagcac
cggctgcagacgaagtggagggaggcggagggaagcggcttcggcttcctggggcaggtg
aagcccgcggcaggggacgcagagcaggaggtggttctgaccaccaaggccccagtgggg
cgcttgagcccctccaagggctacaccgtgcagatcttcaagctcaccggctccgggaac
gccctgctggcgcagagggagtttgtgccgaagtctgacctgaagagtcacgcgacaagc
gggagcagccggaagcccccggaggcggccgcggagcccacaccctcccatgcggggagc
ccaggccctgagccccgagttgccccctccccaggtcaagactcccccaagacgccagcc
aacccccagttctgcggcacaccccccacacccggggacatgctcttcctggtggacggg
tcctggagtgttggccatagtcatttccagcaggtcaaagatttcctggccagcatcatt
gagccctttgagatcgggccaaataaagtccaagtcggcctgactcagtacagtggagac
ccccagaccgagtgggacctcagcgccttccgcagcaaggacaaggtgctggcagctgtc
tgtagcctccgctataaagggggaaacacgttcacgggcctggccctgactcacgtgtgg
gagcagaacctgaagccgggagcggggccccgcccagaggcagccaaggtggtggtccta
gtgacggacggcaaatcccaggacgatgcccatgctgctggccgcgtcctcaaggacctg
ggtgtcgctgtctttgctgtaggtgggcagaacgcagacgaggccgagctgcggctcctg
gagtcccccccgctagacatcaccgtccacagcgtgcgggacttcccccagcttggcacc
ctggccggcttgctcagccgcctcatctgccagaaggtccaaggcgggagccggggccct
gtatctggtcacgtggcggccttccggggtggccccccacaggaggtgaggggctctctg
ccggccgtggacagcgtcggggccacgcgtgtgcagccgtcctgcaggacggagggcgcg
gtgagggtggtccgcaagcgcgagtggaaagggggagtgggcgtgcgtcctcgcgccacc
tgtggctgtgtggtggccgaggtcaccgctcaactgtggctcctgttccgggtggtgctg
gacaggcctgccttgtccatgacgcttcacaacctgaccgttggccccgagtacttggtg
tctgtgctccctgtcggcgaggccggggtcggcaagggtctggggggccttgtgaccaca
gcacctctgcctctgccccaggcactgaccctggctgcagggacacccaccaccgtccgc
ctcacctggcggccattggcgaggccacgcagtacctggtgcctgctcgccagcctcccc
gagccaccaggaggggaggcagaggagggtgcttgccagcaggtgcaggtggggcagcca
gaggtgctgctggatggcctgaagcctggcacggactacgacgtccaggtgcagagcttg
caagggccggagaagtcgatctctgacccaggacccaggaaccacctgacgctccccgac
ctgctggcagccaccaaatatagggtccaggtctcggcggtctacggagcaagggagagc
gcgccagtgtctgctacaggccggatgagcttccacctcgtggccggcttcgggctggtg
gagcaggagcatgcgtccctccgaggcgttgccatggagcgtgcggcgtccggctgcacc
cggaccttcacgctcttgaaggacgctcggctgacccgctgggccagcggctcccagctg
gctgcacccccaccggagcacacggtggtcttcctgctgcgcgcgctgcccgagactccc
cgtgaggcctttgctttacggcagatgaaggctgaggacctgcagcccatcctgggggtc
ctgctggacgctggcaggaagtctctgacctacttcaaccatgaccccagggccaccctg
caagaggtgacctttgacctgcccgaagtgaagaagattttctttggaagcttccacaag
gtgcacgtggccgtgggccactccaaggtcaggctctacgtggactgccagaaggtggcc
gagaggccaattggggaggccggcagcccacctgccacgggcttcgtgatgctggggagg
ctggccaaggcccggggcccccggagcagctcagccacattacagctccagctgctgcac
ttcgtgcgcagggactcctggncagggaagggcgtgtgctgcgagctccctgcggcggtg
gaaggatggagagactgccttgccttctcttctgcctgcacctgttcctcgcagacccct
gggcccccagggcctccaggcctccctggaaggaacggagccccaggagagcagggcttc
ccagggcccagggatggcccccatgctgcccacagtgaccctgcaccccccccccagact
cggcatcgagaacggctgtgcgggcgggaggaagaggcaggagcagcgagtcctggtggg
gacctgggggccgaagggggtggagagaccttcccagcagagggtctggggccacacccg
ccacagcctgtcaaggccgccccgttcccggtgctcgggagagctcagggcaggcctcct
ttagatgtggaggcccacaaaggcttctga
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