Mustela nigripes (black-footed ferret): 132023157
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Entry
132023157 CDS
T09425
Symbol
ATXN2
Name
(RefSeq) ataxin-2 isoform X1
KO
K23625
ataxin 2/2L
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp05014
Amyotrophic lateral sclerosis
mnp05017
Spinocerebellar ataxia
mnp05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132023157 (ATXN2)
05017 Spinocerebellar ataxia
132023157 (ATXN2)
05022 Pathways of neurodegeneration - multiple diseases
132023157 (ATXN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132023157 (ATXN2)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132023157 (ATXN2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SM-ATX
LsmAD
PAM2
LSM
Motif
Other DBs
NCBI-GeneID:
132023157
NCBI-ProteinID:
XP_059264404
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Position
8:complement(8760470..8876493)
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AA seq
1146 aa
AA seq
DB search
MSLKPQQQQQQQQQQQQQQQQPPPAAANARKPGGSGGLLTSPAAAPSPSSVSSSSAVASS
SSAAASAGGGRPGLGRGRNSKGLPQSTISFDGIYANMRMVHILTSVVGSKCEVQVKNGGI
YEGVFKTYSPKCDLVLDAAHEKSMESSSGPKREEIMESILFKCSDFVVVQFKDMDSSYAR
RDAFTDSAISAKVNGEHKEKDLEPWDAGELTTTEELEALENDVSNGWDPNDMFRYNEENY
GVVSTYDSSLSSYTVPLERDNSEEFLKREARANQLAEEIESSAQYKARVALENDDRSEEE
KYTAVQRNSSEREGHSINTRENKYIPPGQRNREVISWGSGRQNSPRMGQPGSGSMPSRST
SHTSDFNPNSGSDQRVVNGGVPWPSPCPSPSSRPPSRYQSGPNSLPPRAATPTRPPSRPP
SRPSRPPSHPSAHGSPAPVSTMPKRMSSEGPPRMSPKAQRHPRNHRVSAGRGSISSGLEF
VSHTPPSEAAAPPAARTSPAGGTWSSVVSGVPRLSPKTHRPRSPRQNSIGNTPGGPVLAS
PQAGIIPAEAVAMPVPAASPTPASPASNRAVTPSIEAKDSRLQDQRQNSPAGNKENVKPN
ETSPSFSKTENKGISPIVSEHRKQIDDLKKFKNDFRLQPSSTSESMDQLLNKNREGEKSR
DLIKDKIEPNAKDSFIENSSSNCTSSSSKPNSPSISPSILSNTEHKRGPEVTSQGVQTSS
PGCKQEKDDKEEKKDAAEQVRKSTLNPNAKEFNPRSFSQPKPSTTPTSPRPQAQPSPSMV
GHQQPAPVYTQPVCFAPNMMYPVPVSPGVQPLYPIPMTPMPVNQAKTYRAGKVPNMPQQR
QDQHHQSTMMHPASAAGPPIVATPPAYSTQYVAYSPQQFPNQPLVQHVPHYQSQHPHVYS
PVIQGNARMMAPPAHAQPGLVSSSATQYGAHEQTHAMYACPKLPYNKETSPSFYFAISTG
SLAQQYAHPNATLHPHTPHPQPSATPTGQQQSQHGGSHPAPSPVQHHQHQAAQALHLASP
QQQSAIYHAGLAPTPPSMTPASNTQSPQNSFPTAQQTVFTIHPSHVQPAYTNPPHMAHVP
QAHVQSGMVPSHPTAHAPMMLMTTQPPGGPQAALAQSALQPIPVSTTAHFPYMTHPSVQA
HHQQQL
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgaagccccagcaacagcagcagcagcagcagcagcagcaacaacagcagcag
cagccgccgcccgcggccgccaatgcccgtaagcccggcggcagcggcggccttctcacg
tcgcccgccgccgcgccgtcgccgtcctcagtctcgtcgtcctcggcggtggcttcctcc
tcctcggcggcggcgagcgccggcggcgggcggcccggcctgggcagaggtcgaaacagc
aaaggactgcctcaatccacgatttcttttgatggaatctatgcaaatatgaggatggtt
catatacttacatcagttgttggatccaaatgtgaagtacaagtgaaaaacggaggtata
tatgaaggagtttttaaaacatacagtcctaagtgtgatttggtacttgatgctgcacat
gaaaaaagtatggaatccagttcggggccaaaacgtgaagaaataatggagagtattttg
ttcaagtgttcagactttgttgtggtacagtttaaagatatggactccagttatgcaaga
agagatgcttttactgactctgctatcagtgctaaagtgaatggtgaacacaaagagaag
gacctggagccctgggatgctggtgaactcacaactactgaggaactggaggctttggaa
aatgatgtatctaatggatgggatcccaatgatatgtttcgatataatgaagaaaattac
ggtgtagtgtctacatatgatagcagtttatcttcatatacggtacccttagaaagggat
aactcagaagaatttttaaaacgagaagcaagggcaaaccaattagcagaagaaattgaa
tcaagtgcccagtacaaagcccgggtggccctggaaaatgatgataggagtgaagaagaa
aaatacacagccgttcagagaaattccagtgaacgtgagggccacagcataaacactagg
gaaaataaatatattcctcccggacaaagaaatagagaagtcatatcctggggaagtggg
agacagaattcaccgcgtatgggccagcctggatcgggctccatgccgtcaagatccacc
tctcacacttcagatttcaacccgaattctggttcagaccaaagagtagttaatggaggt
gttccctggccatcgccttgcccatctccttcctctcgcccaccttctcgctaccagtca
ggtcccaactctcttccacctcgggcagccacccctacacggccgccctccaggcccccc
tcgcggccatccagacccccgtctcacccctctgctcatggttctccagctcctgtctct
actatgcctaaacgcatgtcttcagaagggcctccaaggatgtccccaaaggcccagcga
caccctcgaaatcacagagtttctgctgggaggggttccatttccagtggcctagaattt
gtatcccataccccaccaagtgaagcagctgctcctccagcagcaagaactagtcctgcg
gggggcacatggtcatcagtggtcagcggggttccaagattatcccctaaaactcataga
cccaggtctcccagacagaacagtattggaaatactcctggtgggccagttcttgcttct
cctcaagctggtattattccagctgaagctgttgctatgcctgttccagccgcttctcct
acacctgccagtcctgcatccaacagagctgtcaccccgtctattgaggctaaggattcc
aggcttcaagatcagaggcaaaattctcctgcagggaataaagaaaatgtgaagcccaat
gagacatcacctagcttctcaaagactgaaaataaaggtatatcaccaattgtttctgaa
cacagaaagcagattgatgacttaaagaagtttaagaatgattttaggttacagccaagt
tctacttctgaatctatggatcaactgctaaacaaaaatagagagggagaaaaatcaaga
gatttgatcaaagacaaaattgaaccaaatgctaaggattcattcattgaaaatagcagc
agcaattgcaccagtagcagcagcaaaccgaacagtcccagcatttccccttcaatcctc
agtaacacggagcacaagaggggacctgaggtcacatcacaaggggttcagacttccagt
ccaggatgtaaacaagagaaggatgataaagaggagaagaaagatgcagctgagcaagtg
agaaaatcaactttgaatcctaatgcaaaagagttcaaccctcgttccttttctcagcca
aagccttctacaaccccaacttcacctcgtcctcaagcacagcccagcccatccatggtg
ggccaccaacagccagctccagtttacacgcagcctgtttgttttgcaccaaatatgatg
tatccagtcccagtgagcccaggcgtgcaacctttataccctatacctatgacgcccatg
ccagtgaatcaagccaagacatatagagcaggtaaagtaccaaatatgccccagcagcgg
caggaccagcatcatcagagcaccatgatgcacccagcgtctgcggcgggcccgccgatt
gtggctaccccaccagcttattccacacaatatgttgcctatagtcctcagcagtttcca
aatcagcctctcgttcagcatgtgccacattatcagtctcagcatcctcatgtctatagt
cctgtgatacagggtaatgctagaatgatggcaccgccggcacatgcccagcctggttta
gtgtcttcttcagcaactcaatacggggctcatgagcagacgcatgcgatgtatgcatgt
cccaaattaccatacaacaaggagacaagcccttctttctactttgccatttccactggc
tcccttgctcagcagtatgcgcaccctaatgctaccctgcacccacatactccacatcct
cagccttcagctacccccaccggacagcagcagagccagcatggtggcagtcatcctgca
cccagtcctgttcagcaccatcagcaccaggccgcccaggcgctccatctggccagtcca
cagcagcagtcagccatttaccacgcggggctcgcaccaaccccaccttccatgacccct
gcctccaatacgcagtcgccacagaatagtttcccaacagcacaacagaccgtctttaca
atccatccttctcacgttcagccggcatacaccaatcctccccacatggcccacgtacct
caggctcatgtacagtcaggaatggttccttctcatccaactgcccatgcgccaatgatg
ctaatgacgacacagccacccggcggtccccaggccgccctcgctcaaagtgcactacag
cccattccagtctcgacaacagcgcatttcccctatatgacgcacccttcagtacaagcc
caccaccaacagcagttgtaa
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