KEGG   Mustela nigripes (black-footed ferret): 132023325
Entry
132023325         CDS       T09425                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
mnp  Mustela nigripes (black-footed ferret)
Pathway
mnp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    132023325 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mnp03041]
    132023325 (SF3A1)
Spliceosome [BR:mnp03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    132023325 (SF3A1)
 Complex B
    132023325 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    132023325 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 132023325
NCBI-ProteinID: XP_059264797
LinkDB
Position
8:complement(22715117..22736448)
AA seq 793 aa
MPAGPVQAVPPPPPVATEPKQPTEEEASSKEDSTPSKPVVGIIYPPPEVRNIVDKTASFV
ARNGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQ
QQATQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQ
FLTQLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLFTKLKKEAENPREVL
DQVCYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTT
PEELGARILIQERYEKFGESEEVEMEVESDDEDEKQEKAEEPPSQLDQDTQVQDMDEGSD
DEEEGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKI
PASKMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVE
ETAIGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDD
TKEKIGPSKPNELPQQPPPPSSATNIPSSAPPITSVPRPPAMPPPVRTTVVSAVPVMPRP
PMASVVRLPPGSVIAPMPPIIHAPRINVVPMPPSAPPIMAPRPPPMIVPTAFVPAPPVAP
VPAPAPMPPVHPPPPMEDEPASKKLKTEDSLVPEEEFLRRNKGPVSIKVQVPNMQDKTEW
KLNGQVLVFTLPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMANGAI
IHLALKERGGRKK
NT seq 2382 nt   +upstreamnt  +downstreamnt
atgccggccggacccgtgcaggcggtgcccccgccaccgcccgtggccaccgagcccaaa
cagcccacagaagaagaagcttcttcgaaggaggattctaccccctccaagccagtagtg
ggaattatttatcctcctccagaagtcaggaatatcgttgacaagactgccagctttgtg
gccagaaacggacctgaatttgaagctaggatacgacagaacgagatcaacaatcccaag
tttaacttcttgaaccctaacgatccttaccatgcctactaccgccacaaggtcagcgaa
ttcaaggaggggaaggctcaggagccctcggccgccatccccaaggtcatgcagcagcag
cagcaggccacccagcagcagctgccccagaaggttcaagcccaggtgatacaagagacc
atcgtgccgaaagagccccctcctgagtttgagttcatagcagaccccccctccatctca
gcctttgacctggacgtggtgaagctgacggctcagtttgtggccaggaacggccgccag
tttctgacccagttgatgcagaaggagcagcgtaactaccagtttgacttcctccgcccg
cagcatagcctcttcaactacttcacgaagctggtggaacagtacaccaagatcttgatt
cctcctaaaggcttatttacaaagctcaagaaagaggctgagaacccccgagaagttttg
gaccaggtgtgttaccgggtggagtgggccaagttccaggagcgagagaggaagaaggaa
gaggaggaaaaggagaaggagcgggtggcctatgcgcagattgactggcatgattttgtg
gtggtggaaacagtagacttccagcccaatgagcaagggaatttccctccccccaccacc
ccagaggagctgggggcccgaattctcattcaggagcgctacgagaagtttggggagagt
gaagaggttgagatggaggtcgagtctgatgatgaggacgagaaacaggagaaggcggag
gagcctccttcgcagttggaccaggacacccaagtgcaagacatggacgagggttcggat
gatgaagaagaagggcagaaagtgcccccacccccagagacacccatgccacctcctctg
cccccaactccagaccaggtcattgttcggaaggattatgaccccaaagcttccaagccc
ctgcctccagcccctgctccagatgagtatcttgtgtctccaatcacgggggagaagatc
cccgccagcaaaatgcaggagcacatgcgcatcgggcttctcgatccccgctggctagag
cagcgagatcgctccatccgggagaagcagagcgatgatgaagtatatgcaccaggtctg
gatattgaaagcagcttgaaacagttggctgagcggcgtactgacatctttggtgtagaa
gaaacagccatcggtaagaagattggtgaggaagaaatccagaagccagaggaaaaggtg
acctgggacggccactcgggtagcatggcccggacccagcaggctgcccaggccaacatt
accctccaggagcagattgaggccatccataaggccaagggcctggtgccagaggatgat
accaaagagaagattggccctagcaaacccaatgaacttccccagcagccaccacctccg
tcttcagccaccaacattcctagctctgccccacccattacttccgtgccccggccaccc
gcgatgccgcctcctgtccgtaccacagttgtgtctgcagtacctgtcatgcctcgcccc
ccaatggcatcagtggtccgactacccccgggctcagtgattgcccccatgccgcctatc
atccatgcgcccaggatcaacgtggtgcccatgcctccctcggcccctcctattatggca
ccccgcccaccccccatgattgtgccaacagcatttgtgcccgctccacccgtggcccct
gtcccagctccagccccaatgccccctgtccaccctccgcctcccatggaggatgagcct
gcctccaaaaaactgaagacagaagacagcctcgtgcctgaagaggagttcctgcgcaga
aacaagggtccagtgtccatcaaagtccaagtgcccaacatgcaggataagactgaatgg
aaactgaacggacaggtgctggtcttcacactcccgctcacagaccaggtctctgtcatc
aaggtgaagattcacgaagccacgggtatgcctgcagggaaacagaagctgcagtatgag
ggcattttcatcaaggattccaactcattggcttattacaacatggccaacggcgccatc
atccacctggccctcaaggagagaggcgggcggaagaagtag

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