Mustela nigripes (black-footed ferret): 132023811
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Entry
132023811 CDS
T09425
Symbol
LHX5
Name
(RefSeq) LIM/homeobox protein Lhx5
KO
K18493
LIM homeobox protein 5
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
132023811 (LHX5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnp03000
]
132023811 (LHX5)
Transcription factors [BR:
mnp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
132023811 (LHX5)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
132023811
NCBI-ProteinID:
XP_059265928
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Position
8:complement(10369424..10378954)
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AA seq
402 aa
AA seq
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MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF
GTKCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEELYVIDENKFVCKDDYL
SSPSLKEGSLNSVSSCTDRSLSPDLQDPLQDDPKETDNSTSSDKETANNENEEQNSGTKR
RGPRTTIKAKQLETLKAAFAATPKPTRHIREQLAQETGLNMRVIQVWFQNRRSKERRMKQ
LSALGARRHAFFRSPRRMRPLGGRLDESEMLGSTPYTYYGDYQGDYYAPGGNYDFFAHGP
PSQAQSPADSSFLAASGPGSTPLGALEPPLAGPHAADNPRFTDMISHPDTPSPEPGLPGA
LHPLPGEVFSGGPSPPFPMSGASGYSGPLSHPNPELNEAAVW
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcactgtgccggctgcgagcggcccatcctagaccgcttcctgctgaacgtg
ctggaccgcgcgtggcacatcaaatgcgtacagtgctgcgagtgtaagaccaacctctcg
gagaagtgcttctcgcgcgagggcaagctctactgcaaaaatgacttcttcaggcgcttt
ggcacaaagtgtgcaggctgtgcgcaaggcatctcgcccagcgacctggtgcgcaaggcc
cgcagtaaggtcttccacctgaactgcttcacctgcatggtgtgcaacaagcagctgtcc
acgggcgaggagctctacgtcatcgacgagaacaagttcgtgtgcaaggacgactacctg
agctcccccagcctcaaggagggcagcctcaattcagtgtcatcctgtacggaccgcagt
ttgtccccggacctccaggacccactccaggacgaccccaaggagacggacaactcgacg
tcgtcggacaaggagacagccaacaacgagaacgaggagcagaactccggcacgaagcgg
cgcggcccgcgcaccaccatcaaagccaagcagctggagacgctcaaggccgcctttgcc
gccacgcccaagcccacgcgccacatccgcgaacagttggcgcaggagaccggcctcaac
atgcgcgtgatccaggtgtggttccagaaccgaaggtccaaagaacgcaggatgaaacag
ctgagcgcactgggcgcccggagacacgccttcttccggagtccgcggcgcatgcgtccg
ctgggcggccgcttggacgagtctgagatgttggggtccactccgtacacctactacgga
gactatcaaggcgactactacgcgcccggaggcaactacgacttcttcgctcacggcccg
ccgtcacaggctcagtccccggccgactcgagcttcctggccgcgtcgggacccggctcg
acgccgctgggagcgctggagccgcctctggccggcccgcacgccgccgacaaccccagg
ttcaccgacatgatctcgcacccggacacgccgagcccggagccgggcctgcccggcgcg
ctgcaccccctgcccggcgaggtgttcagcggcgggcccagcccgcccttccccatgagc
ggcgccagcggctacagcggacccctgtcgcaccccaaccccgagctcaacgaggccgcc
gtgtggtaa
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