Mustela nigripes (black-footed ferret): 132024445
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Entry
132024445 CDS
T09425
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnp03000
]
132024445 (RC3H2)
04121 Ubiquitin system [BR:
mnp04121
]
132024445 (RC3H2)
Transcription factors [BR:
mnp03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
132024445 (RC3H2)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
132024445 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
Xin
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
132024445
NCBI-ProteinID:
XP_059266845
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All DBs
Position
9:11651974..11700257
Genome browser
AA seq
1189 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQSIKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDAVSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHETPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKINATVRTFPLLNKVGVNNTVTTTAGNVISVI
GSSETTGKIVPSTNGISNAENSVSQLIPRSTDSTLRALETVKKVGKVGTNGQNATGPSTE
SVTENKIGSPPKTPVSNVAATSAGPSNVGTELNSVPPKSSPFITRVPVYPQHSENIQYFQ
DPRTQIPFEVPQYPQTGYYPPPPTVPAGVAPCVPRFVRSSNVPESSLPPASMPYADHYST
FSPRDRMSSSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPPMYQRDDIIRSNSLPPM
DVMHSSVYQTSLRERYNSLDGYYSVACQPPSEPRTNVPLPREPCGHLKTSCEEQIRRKPE
QWAQYHTQKAALVSPTLPVATQSPTPPSPLFSVDFRTDFSESVSGTKFEEDHLSHYSPWS
CGTIGSCINAIDSEPRDVIANSNAVLMDLDSGDVKRRVHLFETQRRTKEEDPIIPFSDGP
IISKWGAISRSSRTGYHTTDPVQATASQGSATKPISVSDYVPYVNAVDSRWSSYGNEATS
SAHYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWNSLDE
GRHLSLNLLSKEIELRNGESDYTEDTSDTKPDRDIELELSALDTDEPDGQAEQIEEILDI
QLGISSQNDQLLNGTAVENGHPVQQHQKEPLEQKRQSLGEDHVILEEQKTILPVTSCFSQ
PLPVPISNASCLPITTSVSVGNLILKTHVMSEDKNDFLKPVANGKMVNS
NT seq
3570 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcaatggacagaatttctgtcctgtccaatctgctataatgaa
tttgatgagaatgtgcacaaacccataagtttaggttgttcacacactgtttgcaagacc
tgcttgaataaacttcaccgaaaagcttgtccttttgaccagactgccatcaacacagac
attgatgtgcttcctgtcaacttcgcacttctccagttagtaggagcccaggtaccagat
catcagtcaataaagttaagtaatctaggtgagaataaacactatgaggttgcaaagaaa
tgtgttgaggatttggcactctacttgaaaccactaagtggaggtaaaggtgtagctagt
ttgaaccagagtgcactgagccgtccaatgcaaaggaaactggtgacacttgtaaactgt
caactggtggaggaagaaggtcgtgtcagagcaatgcgagcagcccgttcgcttggagaa
agaactgtaacagaactaatattacagcaccagaatccccagcaattgtctgccaacctg
tgggctgctgtcagggctcgaggatgccagtttctggggccagctatgcaagaagaggcc
ttgaagctggtattgctagcattagaagatggttctgctctctcaaggaaagtactggta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatcaaaaacaagtattggt
catgttgtgcaactactgtatcgagcttcatgtttcaaagttaccaaaagggatgaagac
tcttccctgatgcagctaaaggaagagtttcggagttacgaagcattacgcagagaacat
gatgcccaaattgttcatattgctatggaggcaggactccgtatttcaccagagcagtgg
tcctcacttctctatggtgacttggcacataaatcacacatgcagtctatcattgataag
ctgcagtctccagaatcatttgcaaagagcgtccaggaattgacaattgttttgcaacgg
acgggtgacccagctaacttaaatagactgaggcctcatttagaacttcttgcaaacata
gaccctaatccagatgctgtttcgccaacttgggagcagctagaaaatgcaatggtagct
gttaaaacagtggttcatggccttgtggacttcatacaaaattatagtagaaaaggccat
gagacacctcagcctcaaccaaacagcaaatacaagactagcatgtgccgagatctgcgt
caacaaggagggtgtccccgaggaacaaactgtacttttgcccattctcaggaagagctt
gaaaagtatcgattaaggaacaaaaagatcaatgcaactgtaagaacatttcctcttcta
aataaagttggtgtaaacaacactgtcacaaccacagccggaaatgtcatttctgtcata
ggaagttctgaaacaacggggaaaattgttccaagtacaaacggaatttcaaatgcagaa
aacagtgtttcccagctaatcccacgtagtactgacagtacgttaagagctctggagact
gtgaagaaggtggggaaggttggcactaatggtcagaatgctactgggccttctacagag
tctgtcactgaaaataaaattggctctccacccaagactcctgtaagtaatgtagcggct
acctcagctgggccttctaatgttggaacagagctgaattctgtgcctccaaaatccagc
ccatttataactagagtaccagtatatcctcagcattctgaaaacattcagtattttcaa
gatccaaggactcagataccctttgaagtcccacagtacccacagacagggtactaccca
ccacctccaacggtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccagt
aatgttccagagtcctccctcccacctgcttctatgccatatgctgatcattacagtaca
ttttcccctcgagatcgaatgagttcttctccttaccagccgcctcctccgcagccatat
ggaccagttcccccagtaccttctggaatgtatgctcctgtgtacgacagcaggcgcatc
tggcgcccacctatgtaccaacgagatgacattattagaagcaattctttacctccaatg
gatgtgatgcactcgtctgtttatcagacatctttgcgagaaagatataactcattagat
gggtattattccgtggcttgtcagccaccaagtgagccaaggacaaatgtgcctttacca
agggaaccttgtggtcatttgaagaccagttgcgaggagcagataagaagaaagccagag
cagtgggcacagtaccacactcagaaagcagctcttgtctctccaactcttcctgtggca
acacagtcaccaacaccaccttctcctctattcagtgtagactttcgcactgatttctct
gagagtgtgagtggtacaaaatttgaagaagatcatctttctcactattctccctggtct
tgtggcaccataggctcctgtataaatgccatcgattcagagcccagagatgtaattgct
aattcaaatgctgtattaatggacctggacagtggagatgttaagagaagagtgcattta
tttgaaacccagagaaggacaaaagaagaagacccaataattccatttagtgatggacct
atcatctcaaaatggggtgcaatttccagatcttcacgtacaggttatcataccacagat
cctgtccaggccactgcttcccaaggaagtgccactaagcctatcagtgtatcagattat
gttccttatgtcaatgctgttgattcaaggtggagttcatatggtaatgaggccacatca
tcagcacactatattgaacgggacagattcattgttaccgatttatctggtcatcgaaag
cattccagtactggagaccttttgagcattgaacttcagcaggccaagagtaactcactg
cttcttcagagggaggccaatgctctggccatgcaacagaagtggaattccctggatgaa
ggccgtcaccttagcttaaatcttctaagcaaggaaattgaactgagaaatggagagagt
gattatacagaagatacaagcgatactaagcctgatagggatattgagttagagctttcg
gcacttgatactgatgaacctgatggacaggctgaacaaattgaagagatcctggacata
cagcttggtatcagttctcaaaatgatcagttgctgaatggaacagcagtggaaaatggg
catccagtccagcagcaccaaaaggagccgctggagcagaagagacagagtttaggtgaa
gaccatgtgattctggaggagcaaaaaacaattctgccggtaacttcttgctttagccag
ccactcccagtgcccattagcaatgcaagttgcctccccatcaccacgtctgtcagtgtt
ggcaacctcattctgaaaactcatgttatgtctgaagataaaaacgactttttaaaacct
gttgcaaatgggaagatggttaacagctga
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