Mustela nigripes (black-footed ferret): 132024535
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Entry
132024535 CDS
T09425
Symbol
RAD23B
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03420
Nucleotide excision repair
mnp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132024535 (RAD23B)
09124 Replication and repair
03420 Nucleotide excision repair
132024535 (RAD23B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mnp03051
]
132024535 (RAD23B)
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132024535 (RAD23B)
Proteasome [BR:
mnp03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
132024535 (RAD23B)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
132024535 (RAD23B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPC-binding
UBA
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
Crinkler
UBA_3
Dsc3_N
UBA_2
Ubiquitin_2
DUF1421
UBA_9
OTU1_UBXL
Motif
Other DBs
NCBI-GeneID:
132024535
NCBI-ProteinID:
XP_059267112
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Position
9:complement(24875028..24917331)
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AA seq
407 aa
AA seq
DB search
MLVTLKTLQQQTFKIDIDPDETVKALKEKIESEKGKDAFPVAGQKLIYAGKILNDDTALK
EYKIDEKNFVVVMVTKPKAVTPAPATTQQSSPATTTTVSSSTAPAVAQAPTPAPALAPTP
SPASITPAPTTASSEPAPASATQPEKPAEKPAETPVATSPTATDSTSGDSSRSNLFEDAT
SALVTGQSYENMVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPGDRESQAVVDT
PPAVSTGAPPSSVAAAAATTTASTTTASPGGHPLEFLRNQPQFQQMRQIIQQNPSLLPAL
LQQIGRENPQLLQQISQHQEHFIQMLNEPVQEAGGQGGGGGGGSGGIAEAGSGHMNYIQV
TPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDED
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcaccctgaagaccctccagcagcagaccttcaagatcgacatcgaccccgac
gagacggtaaaagcactgaaagagaaaattgaatctgaaaaggggaaagatgcttttcct
gtagcaggtcaaaaattaatttatgcaggcaaaatcctcaatgatgatactgctctaaaa
gaatataaaattgacgaaaaaaacttcgtggtggttatggtgacaaaacccaaagcagtg
acaccagcaccagctacaacccaacagtcaagtcctgccaccactaccacagttagctcc
tccacagctccagctgtggctcaggccccaaccccggctcccgctctggctcctactcct
tcccctgcatccatcactccagcaccaacgacagcatcttctgaacctgcacctgctagt
gcgacgcaaccagagaagcctgcagaaaagccagcagagacaccagtagctacgagtcca
acagcaactgacagtacatcaggagattcttctcggtcaaacctttttgaagatgcaacc
agtgcactggtgacaggtcagtcttatgagaatatggtaactgaaatcatgtcaatggga
tatgaacgagagcaagtgattgcagccctgagagccagtttcaacaaccctgacagagca
gtggagtaccttttaatggggatccctggagatagagagagtcaggctgtggtggacacc
cctcctgcggtcagcactggggctcctccatcttcggtggcggccgctgcggcgactacg
acggcatcgacaaccacagcgagccctggaggacatccacttgaatttttacggaatcag
cctcagtttcaacagatgagacagattattcaacagaatccttccctgcttccagcattg
ctacaacagataggtcgagaaaatcctcaattactgcagcaaattagccagcaccaggag
cattttattcagatgttaaatgaaccagttcaagaagctggtggtcaaggaggagggggt
ggaggtggcagtggaggaattgcagaagccggaagtggtcatatgaactacattcaagta
acgcctcaggagaaagaagctatagaaaggttaaaggcactaggatttcctgaaggactt
gtgatacaagcatattttgcttgtgagaagaatgagaacttggctgccaattttcttcta
cagcaaaactttgatgaagattga
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