Mustela nigripes (black-footed ferret): 132024543
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Entry
132024543 CDS
T09425
Symbol
ABCA1
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp02010
ABC transporters
mnp04148
Efferocytosis
mnp04975
Fat digestion and absorption
mnp04979
Cholesterol metabolism
mnp05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132024543 (ABCA1)
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
132024543 (ABCA1)
09150 Organismal Systems
09154 Digestive system
04975 Fat digestion and absorption
132024543 (ABCA1)
04979 Cholesterol metabolism
132024543 (ABCA1)
09160 Human Diseases
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
132024543 (ABCA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mnp02000
]
132024543 (ABCA1)
Transporters [BR:
mnp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132024543 (ABCA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
132024543
NCBI-ProteinID:
XP_059267137
LinkDB
All DBs
Position
9:26824657..26988122
Genome browser
AA seq
2261 aa
AA seq
DB search
MAYWPQLRLLLWKNLTFRRRQTCQLLLEVAWPLFIFLILISVRLSYPPYEQHECHFPNKA
MPSAGTLPWVQGIICNANNPCFRYPTPGEAPGVVGNFNKSIVSRLFADARRLLLYSQKDT
SMKDMHQVLRTLQQLESSSSSLKLQDFLVDNETFSGFLTYNLSLPRPTVDKIQVANVSLH
KVFLQGYQLHLTDLCSGSEFEEVIQLGEQELSKLCSLPSEKLDAAEQVLHSNMDILKPIL
RELNSTSPIPSKELSKATGTLLDSLGSLIQQLLSMNSWSDMRQEVLFLTNANSSSSSTQI
YQAVSRIVCGHPEGGGLKIKSLNWYEDNNYKALFGGNGTDEDAGSFYDNSTTPYCNDLMK
NLESSPLSRIIWKALKPLLVGKILYTPDTPATRQVMAEVNKTFQELAVFHDMQGMWEELS
PKIWTFMESNPEMDLVRMLLASRSNDHFWEQKLDGLDWTAKDILAFLAKHPEDVQSANGS
VYTWREAFNETDQAIQTISRFMECVNLNKLEPVATEVRLINKSMELLDERKFWAGIVFTG
ITPGSVELPHHVKYKIRMDIDNVERTNKIKDGYWDPGPRADPFEDMRYVWGGFAYLQDVV
EQAIIRVLTGTEKKTGVYVQQMPYPCYVDDIFLRVMSRSMPLFMTLAWIYSVAVIIKGIV
YEKEARLKETMRIMGLDNGILWFSWFISSLIPLLVSAALLVVILKLGNLLPYSDPSVVFV
FLSVFAVVTILQCFLISTLFSRANLAAACGGIIYFILYLPYVLCVAWQDYVGFTLKIFVS
LMSPVAFGFGCEYFALFEEQGVGVQWDNLFESPMEEDGFNLTTSVSMMLFDTFLYGVMTW
YIEAVFPGQYGIPRPWYFPCTKSYWFGEKSDEKSHPGSSQKGVSEICMEEEPTHLKLGVS
IQNLMKVYRDGMKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAYIL
GKDIRSEMSSIRQNLGVCPQHNVLFDMLTVEEHIWFCARLKGLSEKHVKAEMEQMALDVG
LPPSKLKSKTSQLSGGMKRKLSVALAFVGGSKVVILDEPTAGVDPYSRRGIWELLLKYRQ
GRTIILSTHHMDEADILGDRIAIISHGKLCCVGSSLFLKNQLGTGYYLTLVKKDVESSLS
SCRNSSSTVSYLKKEDSVSQSSSDAGLGSDHESDTLTIDVSAISNLIRKHVAEARLVEDI
GHELTYVLPYEAAKEGAFVELFHEIDDRLSDLGISSYGISETTLEEIFLKVAEESGVDAE
TSDGTLPARRNRRAFGDKQSCLRPFTEDDAADPNDSDVDPESRETDLLSGMDGKGSYQVK
GWKLTQQQFVALLWKRLLIARRSRKGFFAQIVLPAVFVCIALVFSLIVPPFGKYPSLELQ
PWMYNEQYTFVSNDAPEDLGTQELLNALTRHPGFGTRCMEGNPIPNMPCSVGEEEWTTAP
VPQTIVDLFQKGNWTMENPSPTCQCSSDKIKKMLPVCPLGAGGLPPPQRKQNTADILQNL
TGRNISDYLVKTYVQIIAKSLKNKIWVNEFRYGGFSLGASNSHSLPSSQEVNNAIKEVKK
HLKLAKDSSADRFLSSLGRFMTGLDTKNNVKVWFNNKGWHAISSFLNVINNAILRANLQK
GENPSQYGITAFNHPLNLTKQQLSEVALMTTSVDVLVSICVIFAMSFVPASFVVFLIQER
VSKAKHLQFISGVKPVIYWLSNFVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLAL
LLLLYGWSITPLMYPASFVFKIPSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNNIN
DILKSVFLIFPHFCLGRGLIDMVKNQAMADALERFGENRFVSPLSWDLVGRNLFAMAVEG
VVFFLITVLIQYRFFIRPRPVNAKLPPLNDEDEDVKRERQRILDGGGQNDILEIKELTKI
YRRKRKPAVDRICVGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSILSD
IHEVHQNMGYCPQFDAITELLTGREHVEFFALLRGVPEKEVGKVGEWAIRKLGLVKYGEK
YAGNYSGGNKRKLSTAMALIGGPPVVFLDEPTTGMDPKARRFLWNCALSIVKEGRSVVLT
SHSMEECEALCTRMAIMVNGRFRCLGSVQHLKNRFGDGYTIVVRIAGSNPDLKPVQEFFG
LAFPGSVLKEKHRNMLQYQLPSSLSSLARIFSILSQSKKRLHIEDYSVSQTTLDQVFVNF
AKDQSDDDHLKDLSLHKNQTVVDVAVLTSFLQDEKVKESYV
NT seq
6786 nt
NT seq
+upstream
nt +downstream
nt
atggcttactggcctcagctgaggttgctgctgtggaagaacctcactttcagaagaaga
caaacatgtcagctgttgctggaagtggcctggcctctatttatctttttgatcctgatc
tccgttcggctgagttacccaccctatgaacaacacgaatgccactttccaaacaaagcc
atgccctctgcaggaacgcttccttgggttcaggggattatctgtaatgccaataacccc
tgtttccgttatccaactcctggtgaggcccctggggttgttggaaactttaacaaatcc
attgtgtctcgcctgttcgcagatgctcggcggcttcttttatatagccagaaagacacc
agcatgaaggacatgcaccaagttctgaggacattacagcagttagagagttccagttca
agcttgaagcttcaggatttcctggtggacaatgaaacattctctggattcctgacttac
aacctttctctgccaaggcctaccgtggacaaaatacaggtggccaatgtcagtcttcac
aaggtatttttgcaaggctaccagttacatctgaccgatctatgcagtggatcagaattt
gaggaggtgattcagcttggtgaacaagaactttccaagctttgcagcttgccaagcgag
aaactagatgcagcagagcaagtgctccattccaacatggacatcctgaagcccatcctg
agggagctaaactctacctctcccatcccgagcaaggaactgagtaaagccacaggaact
ttgctggatagtcttgggagtttgatccaacagctgttgagcatgaacagctggagtgac
atgcggcaggaagtcctattcctgaccaatgcgaacagctccagctcgtccacccagatc
taccaagctgtgtcccgcatcgtctgtggccatcccgaggggggtggcctgaagatcaag
tccctcaactggtatgaggacaacaactacaaagccctttttggtggcaacggcacggat
gaagatgctggcagcttttatgacaattctacaactccttattgcaatgacttgatgaag
aatttggagtccagtcctctttcccgcatcatttggaaagctctcaagcctctgcttgtt
gggaagatcctgtatacacctgacactccagccactagacaggttatggctgaggtgaat
aagacctttcaggaactggccgtgtttcatgatatgcaaggcatgtgggaagagctcagc
cccaagatctggaccttcatggagagtaacccagaaatggaccttgttcggatgctgttg
gccagcagaagcaatgaccacttctgggaacagaaattggatggcttagactggactgcc
aaagatatccttgcatttctggccaagcacccagaggatgtccagtctgctaatggctct
gtgtacacctggagagaagccttcaatgagactgaccaggcaatccagacgatctctcgc
ttcatggagtgtgtcaacctgaacaagctcgaaccggtagcaacagaagtccggctcatc
aacaagtccatggagttgctggatgagcggaagttctgggctggtattgtgttcactgga
atcactcctggcagcgtggagcttccccatcatgtcaagtacaagatccgaatggacatt
gacaatgtggagaggacaaataaaattaaggatgggtactgggaccccggtcctcgggct
gacccctttgaggatatgcgctatgtctgggggggctttgcctacttgcaagacgtagtg
gaacaggcgatcatcagggtgctgacaggcactgagaagaaaaccggtgtctatgtgcag
cagatgccctacccctgttacgttgatgacatcttcctgcgggtgatgagccggtccatg
cccctattcatgacgctggcctggatctactcggtggctgtgatcatcaagggcatcgtg
tacgagaaggaggcgcggctgaaggagaccatgcgcatcatgggcctggacaatggcatc
ctgtggttcagctggttcatcagcagcctcattcctctgctcgtgagcgccgcccttttg
gtggtcatcctgaaattagggaacctgctgccctacagtgaccccagcgtggtgtttgtc
ttcctatctgtgttcgctgtggtgaccatcctgcagtgcttcctgatcagcacgctattc
tccagagccaacctggcggctgcctgtgggggcatcatctactttatcctgtacctgccc
tatgtgctgtgtgtggcatggcaagactacgtgggcttcacactcaagatctttgtgagc
ctgatgtctcctgtggcttttgggtttggctgtgagtactttgcccttttcgaagagcag
ggcgttggggtacagtgggacaacctgtttgagagccccatggaggaggatggcttcaac
ctcaccacttcagtctccatgatgctattcgacacctttctctatggagtgatgacatgg
tacatcgaggctgtctttccaggccagtatggaatccccaggccctggtattttccttgt
accaaatcctactggtttggtgagaaaagtgatgagaagagccaccctggttccagccag
aagggggtatcagaaatctgcatggaggaggaacccacgcacctgaagctgggcgtgtcc
attcagaacctgatgaaggtttaccgggatggcatgaaggtggctgttgatggcctggct
ttgaatttctatgagggccagatcacctccttcctgggccacaatggagctgggaagacc
accaccatgtcaatcctgactgggctgttcccacccacctcgggcactgcctatatcctg
gggaaagatattcgctctgagatgagcagcatccggcagaacctgggggtctgcccccag
cataacgtgctgtttgacatgctgaccgtggaagaacacatctggttctgtgcacgtctg
aaggggctctcggagaagcacgtgaaagcagagatggagcagatggccttggatgttggt
ttgccacccagcaaactgaaaagcaaaacaagccaactgtcaggcggaatgaagagaaag
ctgtctgtggctttggccttcgttgggggatccaaggttgtcattctggatgagcccaca
gccggtgtggacccttactcccgcaggggaatatgggagctcctgctgaaataccgacaa
ggccgcaccattattctctccacacaccatatggatgaagcagacatcctgggggacagg
attgccatcatttcccatggaaagctgtgctgtgtgggctcctccctgtttctgaagaac
cagctgggaacaggctactacctgaccctggtcaagaaggatgtggaatcctccctcagt
tcctgcagaaacagcagtagcactgtgtcatacctgaaaaaggaggacagtgtttctcaa
agcagttctgatgctggcctgggcagtgaccatgaaagtgacacgctgaccatcgatgtc
tctgccatctccaacctcatcaggaagcatgtggctgaggcccggctcgtggaagacatt
gggcatgaattgacttacgtgctgccctacgaagctgccaaagaaggggccttcgtggaa
ctcttccatgagattgatgaccgactctcagacctgggcatctctagctatggcatctcg
gagaccactctggaagaaatatttctcaaagtggctgaagagagcggggtggatgcggag
acctccgatggcaccttgccagcaagacgaaacagaagggcctttggagacaagcagagc
tgccttcgcccattcactgaagatgatgctgctgatcctaatgattctgatgtagaccca
gaatccagagaaacagacctgctcagcgggatggatggcaaaggctcctaccaggtgaag
ggctggaagctcacacagcagcagtttgtggcccttctgtggaagaggctgctgattgcc
agacggagtcggaagggattctttgctcagatcgtcctgccagctgtgtttgtctgcatt
gccctggtgttcagcttgatcgtgcccccctttggcaagtaccccagcctggaacttcag
ccctggatgtacaacgaacagtacacatttgtcagtaatgatgctcctgaggacttgggc
acccaggaactcctgaatgccctcaccagacaccctggcttcgggacccgctgtatggaa
ggaaacccgatcccaaacatgccctgctccgtgggggaggaggagtggaccaccgccccg
gtcccccagaccatcgtggacctcttccaaaaggggaactggacaatggagaacccctca
cccacctgccagtgtagcagtgacaaaatcaagaagatgctgcccgtgtgtcccctgggg
gcaggggggctgcctcctccacagagaaaacagaacactgcagacatccttcagaacctg
acgggaagaaacatttcagattatttggtgaagacctatgtgcagatcatagccaaaagt
ttaaagaacaagatctgggtgaatgagtttaggtatggagggttttccctgggtgccagt
aattctcattcacttccttcaagtcaagaagttaataatgccatcaaggaagtgaagaag
cacttgaagctggccaaggacagttctgccgatcgatttctcagcagcctggggaggttc
atgacaggactggacacgaaaaataatgtcaaggtgtggttcaacaacaagggctggcat
gccatcagctctttcttgaatgtcatcaacaatgccattctccgggccaacctgcagaag
ggagagaaccccagccagtatgggattacggccttcaaccaccccctgaatctcaccaag
cagcagctctcagaagtggctctgatgaccacatcagtggatgtccttgtgtccatctgt
gtcatctttgcaatgtccttcgtcccagccagctttgtcgtgttcctaatccaagagcgg
gtcagcaaagcaaagcacctgcagttcatcagtggagtgaagcctgtcatctattggctc
tctaatttcgtgtgggatatgtgcaattatgtggtccctgccacgctggtcattatcatc
ttcatctgcttccagcagaagtcctatgtgtcctctaccaacctgcctgtgctagcgctt
ctacttctgctgtacgggtggtcgatcacacctctcatgtacccagcctccttcgtgttc
aagatccccagcacagcctacgtggtcctcaccagtgtaaacctcttcatcgggatcaat
ggcagtgtggccacttttgtgctggagctctttaccaacaataagctgaataacatcaat
gatatcctgaagtctgtgttcttgattttcccacatttttgcctgggacgggggcttatt
gacatggtgaaaaaccaggcaatggccgatgccttggaaaggtttggggagaaccgtttt
gtttcaccactgtcttgggacttagtgggacgaaacctctttgccatggccgtggaaggg
gtggtgttcttcctcatcactgttctcatccagtatagattcttcatcagacccagacct
gtaaatgccaagcttcctcctttgaatgatgaggatgaagacgtgaagcgggaaagacag
agaattcttgatggtggaggacagaatgatatcttggagatcaaggagctgacgaagata
tatagaagaaagaggaagcctgctgttgacaggatttgtgttggcattcctcctggcgag
tgctttggacttctgggagttaatggggctgggaaatcatcaactttcaagatgttgact
ggagataccactgttaccagaggagatgctttccttaacaaaaatagtatcttgtcagac
atccatgaagtccatcagaacatgggctattgccctcagttcgatgccatcacggagcta
ctgactggaagagagcacgtggagttctttgccctcttgagaggagtcccagagaaagaa
gttggcaaggttggtgaatgggcaattcggaaactgggcctcgtcaagtatggcgaaaag
tatgctgggaactatagcggaggcaacaagcgcaagctctccacagccatggctctgatc
ggcgggccccctgtagtgtttctggatgaacctaccacaggcatggaccctaaagcccgg
cgattcttgtggaattgtgctctaagtattgtcaaggaaggcagatcagtagtgctaaca
tctcacagtatggaagaatgtgaagctctttgcactaggatggcaattatggtcaatggg
aggttcaggtgtcttggcagcgttcaacatctgaaaaataggtttggcgatggttataca
atagtggtacgaatagcagggtccaaccctgacctaaagcctgtccaggagttctttgga
cttgcctttccgggaagcgtcctcaaagagaaacaccggaacatgctccagtaccagctt
ccgtcttccctttcttctctggccaggatattcagcatcctctcccagagcaaaaagaga
ctccacatagaagactactctgtttctcagacaacacttgaccaagtgtttgtgaacttt
gccaaggaccaaagtgatgatgaccacttaaaggacctgtcattacacaaaaaccagaca
gtagtcgatgttgcggttcttacgtcttttctccaggatgagaaagtgaaagaaagttat
gtatga
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integrated database retrieval system
