Mustela nigripes (black-footed ferret): 132024580
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Entry
132024580 CDS
T09425
Symbol
NCBP1
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03013
Nucleocytoplasmic transport
mnp03015
mRNA surveillance pathway
mnp03040
Spliceosome
mnp05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132024580 (NCBP1)
09122 Translation
03013 Nucleocytoplasmic transport
132024580 (NCBP1)
03015 mRNA surveillance pathway
132024580 (NCBP1)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132024580 (NCBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132024580 (NCBP1)
03041 Spliceosome [BR:
mnp03041
]
132024580 (NCBP1)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
132024580 (NCBP1)
Spliceosome [BR:
mnp03041
]
Common components
Common spliceosomal components
Cap binding complex
132024580 (NCBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like_2
MIF4G
MIF4G_like
Cob_adeno_trans
DUF2524
Motif
Other DBs
NCBI-GeneID:
132024580
NCBI-ProteinID:
XP_059267217
LinkDB
All DBs
Position
9:complement(32951783..32991279)
Genome browser
AA seq
790 aa
AA seq
DB search
MSRRRHSDENDGGQPHKRRKTSDANETEDHLESLICKVGEKSACSLESNLEGLAGVLEAD
LPNYKSKILRLLCTVARLLPEKLTIYTTLVGLLNARNYNFGGEFVEAMIRQLKESLKANN
YNEAVYLVRFLSDLVNCHVIAAPSMVAMFENFVSVTQEEDVPQVRRDWYVYAFLSSLPWV
GKELYEKKDAEMDRIFANTESYLKRRQKTHVPMLQVWTAEKPHPQEEYLDCLWAQIQKLK
KDRWQERHILRPYLAFDSILCEALQHNLPPFTPPPHTEDSVYPMPRVIFRMFDYTDDPEG
PVMPGSHSVERFVIEENLHCIIKSHWKERKTCAAQLVSYPGKNKIPLNYHIVEVIFAELF
QLPAPPHIDVMYTTLLIELCKLQPGSLPQVLAQATEMLYMRLDTMNTTCVDRFINWFSHH
LSNFQFRWSWEDWSDCLTQDPESPKPKFVREVLEKCMRLSYHQRILDIVPPTFSALCPAN
PTCIYKYGDESSNSLPGHSVALCLAVAFKSKATNDEIFSILKDVPNPNQEDDDDEGFSFN
PLKIEVFVQTLLHLAAKSFSHSFSALAKFHEVFKTLAESDEGKLHVLRVMFEVWRNHPQM
IAVLVDKMIRTQIVDCAAVANWIFSSELSRDFTRLFVWEILHSTIRKMNKHVLKIQKELE
EAKEKLARQHKRRSDDDDRSSDRKDGALEEQIERLQEKVESAQSEQKNLFLVIFQRFIMI
LTEHLVRCETDGTSVLTPWYKNCIERLQQIFLQHHQIIQQYMVTLENLLFTAELDPHILA
VFQQFCALQA
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggcggcggcacagcgacgagaacgacggaggacaacctcacaaaaggagaaag
acctctgatgccaatgaaactgaagatcatttggaatcattaatatgcaaagtgggagaa
aagagtgcctgctctctggagagcaacctagaaggcttggcaggtgttttagaagctgat
cttcctaactacaagagcaagatcttaaggcttctttgtacagttgcgcgcctgttacct
gagaagttgacaatttatacaacattagttggactgctgaatgccaggaattacaacttt
ggtggagagtttgtagaagctatgattcgacaacttaaggaatcattaaaagcaaacaat
tataatgaagctgtatatttggtccgttttttatctgatcttgtgaattgtcatgtcatt
gctgccccatccatggttgctatgtttgaaaattttgtaagtgtaactcaggaagaagat
gtacctcaggtgcggagagattggtatgtttatgcgtttctgtcatctttgccctgggtt
ggaaaggagttgtacgaaaagaaagatgcagagatggaccgcatcttcgctaacactgaa
agctatcttaaaagacgccaaaagacacatgtgcccatgttacaggtatggacggctgag
aaaccacacccacaagaagagtatttagattgcctgtgggcccagattcagaaattgaaa
aaggatcgctggcaggagcggcacatcctaagaccttatcttgcctttgacagcatcctc
tgtgaagcactgcagcacaacctgcctccttttacgccacctcctcacacggaagactcc
gtgtacccgatgccacgggtcatcttccgaatgtttgattacacggatgatcccgagggt
cctgtaatgccagggagtcattcagttgaaagatttgttatagaagagaatcttcactgc
atcattaagtcccactggaaggaaaggaaaacttgcgctgcacagctggtgagctatcca
gggaagaacaagatccccttgaactaccatatagttgaggtgatctttgcagagctgttt
cagctgccagctcccccgcacattgatgtgatgtacacaacgctgctcatcgagctgtgc
aaacttcagcccgggtctctcccccaagttcttgcacaggcaactgaaatgttatacatg
cgtttggacacaatgaacactacatgtgtggacaggtttattaattggttttcccatcat
ctaagtaacttccagtttcgttggagctgggaagattggtcagattgtcttactcaagat
cctgaaagtcccaaaccaaagtttgtaagagaagttctagaaaaatgtatgaggttgtct
tatcatcagcgtatattagatattgttcctcctaccttctcagctctatgtcctgcaaac
ccaacctgcatttacaagtacggagatgaaagtagcaattctcttcctggacactcagtt
gccctctgtttagctgttgcctttaaaagtaaagcaaccaatgatgaaatcttcagcatt
ctgaaagatgtgccaaatcctaaccaggaggatgatgacgatgaaggattcagctttaac
cctttgaaaatcgaggtctttgtacagactctgctacacttggcagccaaatcattcagc
cactcctttagtgctcttgcaaagtttcatgaagtcttcaaaaccctagcagagagtgat
gaaggaaagttacatgttctgagagttatgtttgaagtctggaggaaccatccacagatg
attgctgtactagtagataagatgatccgtacacagattgttgactgtgctgcagtggca
aattggatcttctcttcagaactatctcgagactttactagattatttgtttgggaaatc
ttgcactccacgattcgtaagatgaacaaacacgttctcaaaatccagaaagagctggaa
gaggcgaaagaaaaacttgcaaggcaacacaaacggcgaagtgacgatgacgacagaagc
agtgataggaaagatggggctctggaggaacaaatagaaagattgcaggaaaaagtggag
tctgctcagagtgaacagaagaacctcttcctcgtcatattccagcgttttatcatgatc
ttgactgagcacttagtacgatgcgagactgatgggaccagcgtattaaccccatggtac
aagaactgtatagagaggctccagcagatcttcttacagcatcaccaaataatccagcaa
tacatggtgaccctggagaacctgctcttcactgccgagttagacccgcatatcctggct
gtgttccagcagttctgtgccctacaggcctaa
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