Mustela nigripes (black-footed ferret): 132024636
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Entry
132024636 CDS
T09425
Symbol
VCP
Name
(RefSeq) transitional endoplasmic reticulum ATPase isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04137
Mitophagy - animal
mnp04141
Protein processing in endoplasmic reticulum
mnp05014
Amyotrophic lateral sclerosis
mnp05022
Pathways of neurodegeneration - multiple diseases
mnp05134
Legionellosis
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
132024636 (VCP)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
132024636 (VCP)
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
132024636 (VCP)
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
132024636 (VCP)
05022 Pathways of neurodegeneration - multiple diseases
132024636 (VCP)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132024636 (VCP)
03009 Ribosome biogenesis [BR:
mnp03009
]
132024636 (VCP)
04131 Membrane trafficking [BR:
mnp04131
]
132024636 (VCP)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mnp04147
]
132024636 (VCP)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
132024636 (VCP)
Ribosome biogenesis [BR:
mnp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
132024636 (VCP)
Membrane trafficking [BR:
mnp04131
]
SNARE
SNARE associated proteins
Others
132024636 (VCP)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
132024636 (VCP)
Exosome [BR:
mnp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
132024636 (VCP)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
CDC48_2
AAA_5
AAA_33
AAA_2
TIP49
AAA_22
AAA_14
NPHP3_N
RNA_helicase
Vps4_C
AAA_28
nSTAND3
Parvo_NS1
Mg_chelatase
AAA_17
ATPase_2
IstB_IS21
AAA_18
AAA_7
ATPase
DUF815
ABC_tran
AAA_24
NB-ARC
TsaE
ResIII
NACHT
Sigma54_activat
Viral_helicase1
SLFN-g3_helicase
KAP_NTPase
Zot
DUF3944
Motif
Other DBs
NCBI-GeneID:
132024636
NCBI-ProteinID:
XP_059267410
LinkDB
All DBs
Position
9:36332465..36347382
Genome browser
AA seq
761 aa
AA seq
DB search
MDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQPC
PDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFKV
VETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPLR
HPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESN
LRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVMA
ATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETHG
HVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSALR
ETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKT
LLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA
RGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI
PLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIES
EIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQS
RGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atggatgagctgcaattgttccgaggtgacacggtgttgctgaaaggaaagaagaggagg
gaagctgtgtgcattgtgctttctgatgacacatgttccgatgagaagattcgaatgaat
agagttgttcggaacaaccttcgtgtacacctaggagatgtcatcagcatccagccgtgc
cctgatgtgaagtacggcaaacgtatccatgtactacccatcgatgacacggtggaaggc
atcactggcaatctcttcgaggtataccttaagccatacttcctggaagcttatcgaccc
atccggaaaggagacattttccttgtccggggtggaatgcgtgctgtagagttcaaagta
gtggagacagatcccagcccttactgcattgttgctccagacacagtgattcactgtgaa
ggggagcctatcaaacgagaggatgaggaagaatccttgaatgaagtaggctatgatgac
attggtggctgcagaaaacagctggctcagataaaggagatggtagagctacccctcaga
catcctgctctctttaaggcaattggtgttaagcctcctcggggaatcctgctgtatgga
cctcctgggactgggaagaccctaattgcccgagctgtggcaaatgagactggagccttc
ttcttcttgatcaatggtcctgagatcatgagcaagttggctggtgagtctgagagcaac
cttcgtaaagcctttgaggaggctgagaagaatgctcctgctatcatcttcattgatgaa
ctagatgccatcgctcccaaaagagagaaaacccacggggaggtggaacggcgtattgta
tcacagttgttgaccctcatggatggtctaaagcagagagcacatgtgattgtaatggca
gcaacaaacagacccaatagcattgacccagcccttcggcgatttggtcgctttgacagg
gaggtagatattggaatccctgacgctacaggacgcttggaaattcttcagatccatacc
aagaacatgaagctggcagacgatgtggacctggagcaggtcgccaatgagactcatggg
catgtgggcgctgacttagcagccctgtgctcggaagctgctcttcaagctatccgcaag
aagatggacctcattgacttagaggatgagactatcgatgctgaagtcatgaactctctg
gcagttactatggatgacttccggtgggccctgagccagagcaatccatcagcactgagg
gaaactgtggtggaggtaccacaggtgacctgggaggacattgggggcctggaggatgtc
aaacgtgagcttcaggagctggtccagtatcctgtggagcatccagacaaattcctcaag
tttggtatgacaccctccaagggagtactcttctatggccctcctggctgtgggaaaacc
ttgctggccaaagccattgctaatgagtgccaggccaacttcatctccatcaagggtcct
gagctgctcaccatgtggtttggggagtctgaagccaatgtcagggaaatctttgacaag
gcccgccaagctgccccctgtgtactgttctttgatgagctggattcaattgccaaggcc
cgtggtggcaacattggagatggcggtggggctgcagaccgagtcatcaaccagatcctg
acagaaatggatggcatgtctacaaaaaagaatgtgtttattattggcgctaccaatcga
cctgacattattgatcctgctatcctgcgacctggccgcctcgatcagctcatctatatt
cctcttcctgatgagaagtcccgtgttgccatcctcaaggccaacctgcgcaagtctcca
gttgccaaggatgtggacttggagttcctggctaagatgactaatggcttctctggagct
gacctgacagaaatttgccagcgtgcttgcaagctggccatccgtgaatctatcgagagt
gaaattaggcgagaacgggagaggcagaccaatccatctgccatggaggtagaagaagat
gatccagtgcctgagatccgccgagatcactttgaggaagccatgcgctttgcccgccgt
tctgtcagtgataatgacatccggaagtatgagatgtttgctcagacccttcagcagagt
cggggctttggcagcttcagattcccttcaggaaaccagggtggagctggccccagtcag
ggcagtggaggcggcacaggtggcagtgtgtacacggaagacaatgatgatgatctgtat
ggctaa
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