KEGG   Mustela nigripes (black-footed ferret): 132025615
Entry
132025615         CDS       T09425                                 
Symbol
KDM5B
Name
(RefSeq) lysine-specific demethylase 5B isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
mnp  Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mnp01009]
    132025615 (KDM5B)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mnp03036]
    132025615 (KDM5B)
Enzymes [BR:mnp01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     132025615 (KDM5B)
Protein phosphatases and associated proteins [BR:mnp01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     132025615 (KDM5B)
Chromosome and associated proteins [BR:mnp03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    132025615 (KDM5B)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID PHD zf-C5HC2 JmjN PHD_2 zf-PHD-like PHD_4
Other DBs
NCBI-GeneID: 132025615
NCBI-ProteinID: XP_059269101
LinkDB
Position
10:complement(40404809..40497047)
AA seq 1515 aa
MEPATALPPGPRPALPLGGPGPLGEFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTG
ICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVKLNFLDQIAKYWELQGSTLKI
PHVERKILDLFQLNKLVAEEGGFTVVCKDRKWTKIATKMGFAPGKAVGSHIRGHYERILN
PYNLFLSGDSLRCLQKPNLSTDTKDKEYKPHDIPQRQSVQPSETCPPARRAKRMRAEAMN
IKIEPEETAEARTHNLRRRMGCPTPKCENEKEMKGIVKQETIEKKEYIVESEKEKPKSRS
KKATNAVDLYVCLLCGSGNDEDRLLLCDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLAQE
CSKPQEAFGFEQAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEED
VTVEYGADIASKEFGSGFPVRDGKIKLSPEEEEYLDSGWNLNNMPVMEQSVLAHITADIC
GMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPE
LFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAV
NFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIE
DEKALRETVRKLGVIDSERMDFELLPDDERQCIKCKTTCFMSAISCSCKPGLLVCLHHVK
ELCSCSPYKYKLRYRYTLDDLYPMMNALKLRAESYNEWALNVNEALEAKINKKKSLVSFK
ALIEESEMKKFPDNDLLRHLRLVTQDAEKCASVAQQLLNGKRQTRYRSGGGKSQNQLTVN
ELRQFVTQLYALPCVLSQTPLLKDLLNRVEDFQQHSQKLLSEEMPSAAELQDLLDVSFEF
DVELPQLAEMRIRLEQARWLEEVQQACLDPSSLTLDDMRRLIDLGVGLAPYSAVEKAMAR
LQELLTVSEHWDDKAKSLLKARPRHSLNSLATAVKEIEEIPAYLPNGAALKDSVQRARDW
LQDVEALQVGGRVPVLDTLIELVTRGRSIPVHLNSLPRLELLVAEVQAWKECAANTFLTE
NSPYSLLEVLCPRCDIGLWGLKRKQRKFKEPSPSGKKKSTKLESLSDLERALSESKETAS
AMATLGEARLREMEALQSLRLANEGKLLSPVQDVELRVCLCQKAPAAPMIQCELCRDAFH
TSCVAVPSISQGPRIWLCPHCRRSEKPPLEKILPLLASLQRIRVRLPEGDALRYMIERTV
NWQHRAQQLLSSGNLKSVQDRGGSGLWYSRWQASAGQVAETNKVSQPTGTTSFSLPDDWD
NKASYVHSPFSTGRSCIPLHGVSPEVNELLMEAQLLQVSLPEIQELYQTLLAKPAPAPQT
DRSSPARPSSEKNECCRGKRDGINSLERKLKRRLEREGLSSDRWDRVKKMRTPKKKKIKL
SHSKDMNSFKLERERSYELVRSAETHSLPSDTSYSEQEDSEDEDAICPAVSCLQPEGDEG
GAVLTPKQSRLEEWL
NT seq 4548 nt   +upstreamnt  +downstreamnt
atggagccggccaccgcgctgcccccgggcccgcgcccggcgctgcccctcgggggcccg
ggcccgctgggcgagttcctgcctccccccgagtgcccggtcttcgagcctagctgggaa
gagttcgcggaccccttcgctttcatccacaagatccggcccatagccgagcagactggg
atctgtaaggtgcggccgccgccggattggcagccaccatttgcatgtgatgttgacaaa
cttcattttactccacgtatccagaggctgaatgaattggaggctcaaactcgagtaaaa
ctgaatttcttggaccagattgcaaagtactgggagttacagggaagtactctgaaaatt
ccacatgtggagaggaagatcttggacttgtttcagctcaataagttagttgcagaagaa
ggtggatttacagttgtttgcaaggacagaaaatggaccaaaattgccaccaagatggga
tttgctcctggcaaagctgtggggtcccatatcagagggcattatgaacgcatcctcaat
ccctacaacttgttcctgtcaggagatagtttgaggtgtctgcagaagccaaacctgagc
acagacacaaaggacaaggaatacaaacctcatgatattccccagaggcagtctgtgcag
ccctcagaaacatgccccccagcccgacgagcaaaacgcatgagagcagaggccatgaat
attaaaatagaaccagaagagacagcagaagccagaactcataacctgagacgacgaatg
ggctgtccaactccaaaatgtgaaaatgagaaagaaatgaaaggcatcgtcaagcaagaa
accattgagaagaaagaatacattgtagaaagcgagaaggaaaaacccaaaagccgatct
aaaaaagccaccaatgctgtggatctatatgtctgcctcttatgtggcagtggcaatgat
gaagaccggctgcttttgtgtgatgggtgtgacgacagttaccacaccttttgcttgatc
ccccctctccatgatgttcccaagggagactggaggtgtcctaagtgtttggctcaggag
tgtagcaagccacaagaagcatttggctttgaacaagcagccagggactataccctccgt
acttttggggaaatggcagatgcattcaaatctgattatttcaacatgccagtccatatg
gttcccacagaactagtagagaaagaattttggcgactggtaagcactattgaagaggat
gtcacagtagaatatggagccgatattgcctctaaggaatttggcagtggcttccctgtc
cgagatggaaaaatcaaactttcgcctgaggaggaggagtaccttgatagtggctggaat
ttgaataatatgccggtgatggaacagtctgtccttgctcacattactgctgatatatgt
ggcatgaaacttccttggttgtatgtaggaatgtgcttttcttcattctgttggcatatt
gaagaccactggagctattcaattaactacctgcactggggtgagccaaaaacctggtat
ggagtcccggggtatgctgccgagcagctagaaaatgtaatgaagaaactagctccagag
ctctttgtgtcccagccagatcttctccatcagcttgtgaccatcatgaaccccaatacc
ctgatgactcacgaagtgcctgtttaccgaactaatcagtgtgctggggagtttgtgatt
acatttccaagagcctaccacagtggttttaatcaaggttttaattttgctgaggccgtt
aacttctgtactgttgattggctgccattaggccgacagtgtgtggagcattaccgcttg
cttcaccgctattgtgtattttcccatgatgagatgatttgcaagatggcttccaaggct
gatgtactagatgtcgtggtcgcttcaactgttcagaaagacatggccattatgattgag
gatgagaaggctttaagagaaactgtccgtaaattgggagtaattgattcagaaagaatg
gatttcgagctgttgccagatgatgagcgtcagtgtataaaatgtaaaaccacatgcttc
atgtctgccatctcctgttcttgtaagcctggcctgcttgtttgcctgcatcatgtaaaa
gaattgtgttcctgttctccttacaaatataaactgaggtacagatacactctggatgat
ctctaccccatgatgaatgcactgaagcttcgagcagaatcttacaatgaatgggccctg
aatgtgaatgaagctttggaggcaaagattaacaaaaagaaaagtcttgtcagctttaag
gctttaattgaagaatctgaaatgaagaaattcccagacaatgatcttttgcgtcacctt
cgcttagtcacacaggatgcagagaagtgtgcctctgtcgcacagcagctgcttaatggc
aaaagacagactagataccgatctggtggtggaaaatcccaaaatcaattgacagtgaat
gagctccgacagtttgtgacacagctgtatgcgcttccatgtgtcctcagtcaaacacct
ttgctaaaggatctcttgaatcgtgtagaagatttccaacagcacagtcagaaattgctc
tctgaggaaatgcccagtgctgcagagctgcaagacttgctggatgtcagctttgaattt
gacgttgaacttccacagcttgctgagatgcgtatccgtctggagcaggcccgttggcta
gaagaggttcagcaagcttgcctagaccccagctcccttacattagatgatatgagacgt
ctcatagacctaggggtgggtctggccccgtattcagcagtggagaaagcaatggcccgg
cttcaggaactgctcacagtgtcagagcactgggatgacaaagccaagagtcttctcaaa
gccagacctcggcattcattgaacagccttgctacggcagttaaggagattgaggagatc
cctgcatatctgccaaatggtgcagctctcaaagactcggtgcagagagccagggactgg
cttcaggatgtggaggccctgcaggttggaggacgtgtgccagtattagacacactcata
gaacttgttaccagaggccgatctatcccggtacatctgaattctttaccaagactggaa
ttactagtagctgaggttcaggcttggaaagaatgtgctgctaatacattcttgactgag
aattctccatattctctcttagaggtgctttgtcctcgatgtgacattggcctttgggga
ttgaagaggaagcagaggaagttcaaggagccctcaccaagtggaaagaagaaaagcacc
aaactagagagtctgagtgacctggagagagctttaagtgaaagcaaggagactgcttcc
gctatggcaacacttggggaagctcgcctaagggaaatggaagccttgcagtctctcagg
ctagccaatgaagggaagctgctgtcacctgtccaagatgtggagctgagagtctgcctg
tgtcagaaggccccagctgcccccatgatccagtgtgaactctgcagggatgctttccac
acgagctgtgtggcggtacccagtatttcacaaggcccccgaatctggctttgtccccat
tgtcggagatcagagaagcctccattagagaaaattctgcccctgctggcctccctgcag
cgtatccgcgttcgccttcctgagggagatgcacttcgatacatgatcgaaagaacggtg
aactggcagcacagagcccagcagctgctctcatcagggaacctcaagtctgtgcaggat
cgagggggatcgggactgtggtacagcagatggcaggcctcagcgggacaggtggccgag
acaaataaggtgtctcagcctactggcacaacatccttctccttgcctgatgactgggac
aacaaagcctcatatgtacactctcccttctccactggccgaagttgtatccccctccat
ggtgttagtccagaagtgaatgaactgttgatggaagcccagttgctccaggtatctctt
cctgaaattcaggaactttaccagacgttacttgcaaagccagcccctgctccgcaaact
gatcgaagctcaccagctagacccagcagtgagaagaatgagtgctgccgtgggaagcga
gacggaatcaacagtcttgagagaaaactgaagagacgcctggaaagagaaggcctctcc
agtgaccgatgggatcgagttaaaaaaatgcggacccccaaaaagaagaaaatcaaactg
agccactccaaggacatgaacagtttcaagttagagagagagcgtagctatgagttagtc
cgttctgccgaaactcattccctgccctcagacacatcctattccgaacaggaggactct
gaggatgaagatgccatctgcccagctgtgagctgcctgcagccagaaggagatgagggc
ggcgctgtcttaaccccaaagcagtcacgacttgaagaatggctttga

DBGET integrated database retrieval system