Mustela nigripes (black-footed ferret): 132025638
Help
Entry
132025638 CDS
T09425
Symbol
SOX13
Name
(RefSeq) transcription factor SOX-13 isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnp03000
]
132025638 (SOX13)
Transcription factors [BR:
mnp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132025638 (SOX13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
132025638
NCBI-ProteinID:
XP_059269153
LinkDB
All DBs
Position
10:41523787..41569268
Genome browser
AA seq
744 aa
AA seq
DB search
MAAPRGPHGSWKRGGWARLPRACSLGLGLQISLGLGVRAVSCDAQDRATVEFLERCLRRH
GPQKENRRREDPRRGGVGMMTCGKRGSRKTMRRVGAAPAAPSPPGWPPCPPGLNTGPHSW
KQVPFLPPCTMSMRSPGSAQLAPDGVGTMVNCTVKSEGKKEPCHEALQGSAAAAEPQPGD
PARAPQDAVDSQAPAQDCSSPESNGSPEPKRLGASEAPSGSQEKLDFNQHLKEVVPAIEK
LLSSDWKERFLGRSSVETKDVKGTQESLAEKELQLLVMIHQLSTLRDQLLTAHSEQKNMA
AMLFEKQQQQMELARQQQEQIAKQQQQLIQQQHKINLLQQQIQVNMPYVMIPAFPPSHQP
LPVTPESQLALPIQPIPCKPVDYPLPLLHTPPAPVVKRPGAMAAHHPLQEPSQPLNLTAK
PKAPELPSASSSPSLKMNNCGPRPPSHGAPTRDLQASPPSLPLGFLGEGDAVTKAIQDAR
QLLHGHSGALESSPNAPFRKDLISLDTSPAKERLEESCVHPLEEAMLGCDMDGSRHFPES
RNSSHIKRPMNAFMVWAKDERRKILQAFPDMHNSSISKILGSRWKSMTNQEKQPYYEEQA
RLSRQHLEKYPDYKYKPRPKRTCIVEGKRLRVGEYKALMRTRRQDARQSYVTPPQAGQLQ
MSSPDVLYPRVAGVPLAQPLVEHYVPRSLDPNMPVIVNTCSLREEGEATEDRHSVAEGEL
YRYSEDEDSEGEEKSDGELVVLTD
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
atggcagccccacggggcccacatggctcttggaagcggggcgggtgggctcgcctcccg
cgcgcatgctcactgggcctcgggctccagatttctctgggactcggggtcagggctgtg
agctgtgatgctcaggacagagccacagttgagtttctcgagaggtgtttgagacgacac
gggccccaaaaggaaaacaggaggagagaggaccccagaagaggaggagtgggcatgatg
acctgtggaaagagggggtcccggaagacgatgcggagggtaggagcagcaccggcggcg
ccttctcccccaggctggcctccatgcccccctggactcaacactggtccccattcctgg
aagcaagtccccttcctccccccatgcacgatgtccatgaggagcccgggctctgcccag
ctggccccggatggcgttggcaccatggtgaactgtaccgtcaagtcggaagggaagaag
gagccctgccatgaggccctccagggctcggccgccgcagctgaacctcagccgggagac
ccagcccgggctccccaggatgctgttgactcccaagctccagcccaggactgcagctcc
cctgagagcaatgggtccccggaacccaagagactgggagcttctgaggctccctctgga
agccaggagaagctggacttcaaccaacatttaaaagaagtcgtgccagctattgagaag
ctactgtccagtgactggaaggagaggtttctgggaaggagctctgtggaaaccaaagat
gtcaaagggacccaggagagcctggccgagaaggagctccagctcctggtcatgatccac
cagctgtccacgctgcgggaccagctcctgacggcgcactccgagcagaagaacatggcc
gccatgctgttcgagaagcagcagcagcagatggagctggcccggcagcagcaggagcag
atcgccaagcagcagcagcagttgattcagcagcaacataagatcaacctcctccagcaa
cagatccaggtcaacatgccttacgtcatgatcccggccttccccccgagccaccagccc
ctgcctgtcactcccgagtcccaactggccttgcctattcagcccatcccttgcaaacca
gtggattaccccctgccgctgctgcacacgccccctgcccccgtggtgaagaggcctggg
gccatggctgcccaccaccccctgcaggaaccctcccagcccctgaacctcacggccaaa
cccaaggcccccgagctgcccagtgcctccagctcccccagcctgaagatgaacaattgt
ggaccccgccccccgagccatggggcccccacacgggacctgcaggccagcccgcccagc
ctgccactgggcttcctcggtgaaggggatgctgtcaccaaagccattcaggacgctcgg
cagctgctgcatggccacagtggggcgttagagagttctcccaatgctcccttccggaag
gacctcatcagcctggacacgtccccggccaaagagcggctggaggagagttgcgtgcac
cccctcgaagaagccatgttgggctgcgacatggatggctcccgccactttcccgagtcc
cgcaacagcagccacatcaagaggcccatgaacgccttcatggtgtgggccaaggatgag
cgaaggaagatcctccaagccttcccagacatgcacaactctagcatcagcaagatcctt
ggctcccgctggaagtccatgaccaaccaggagaagcagccgtactacgaggagcaggca
aggctgagccgccagcacctggaaaagtaccccgactacaagtacaagccgcggcccaag
cgcacgtgtatcgtggagggcaagaggctccgggtgggcgagtacaaggccttgatgagg
acgcggcgccaggacgcccgccagagctacgtgactcccccccaggccggccagctgcag
atgagctcccccgacgtcctgtacccgcgggtggcaggtgtgcccctggctcagcccctg
gtggagcactacgtgccccggagcctggaccccaacatgcctgtcatcgtcaacacctgc
agcctcagggaggagggtgaggccacggaagacaggcactcggtggcggagggcgagctg
taccggtacagcgaggacgaggactcggagggcgaggagaagagcgacggggagctggtg
gtgctcacagactga
DBGET
integrated database retrieval system
