Mustela nigripes (black-footed ferret): 132026459
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Entry
132026459 CDS
T09425
Symbol
TNRC18
Name
(RefSeq) trinucleotide repeat-containing gene 18 protein isoform X1
Organism
mnp
Mustela nigripes (black-footed ferret)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAHCC1-like_Tudor
BAH
Tudor_3
Motif
Other DBs
NCBI-GeneID:
132026459
NCBI-ProteinID:
XP_059270331
LinkDB
All DBs
Position
11:complement(3695163..3778083)
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AA seq
2973 aa
AA seq
DB search
MDGRDFGPPRSVHGPPPPLLSGLAMDSHRVGTAAAGRLPASGLPGPLPPGKYMAGLNLHP
HPGEAFLGSFVASGMGPSASSHGSPVPLPSDLSFRSPTPSNLPMVQLWAAHAHEGFSHLP
SGLYPSYLHLNHLEPPSSGSPLLSQLGQPSIFDTQKDGFYLPAPGAPGALHSHAPSSRTP
GGHSSSAPAKGSSREGPAKERAGRGGEPPPLFGKKDPRAREEAAGPRGVVDLTQEARAEG
RQDRGPPRLAERLSPFLAELGPPRGPGAAAECKGKNPPPPPPPPALSLCNGAGDAGLPAL
VAKEAARQDESARLRRAEALLPGPCPCPSPLPPPPKGPPAPPTAPAGAFAAPQPASAGVY
TIFPAAAAAAREPGREHRVVAPTFVPSVEAFDERPGPIQIASQARDARAREREAGRPGVL
QAPPGSPRPPPERPEALREKNSVIRSLKRPPPAEAPPARAARASPDARAYLPAKELLKPE
AEPRACERAPRGPAAAPQQAAKLFGLEPARPPPPPAGPEPKWKPFELGNFATTQMAVLAA
QHHHASRAEEEAAASKKAYLDPGGALPRAAAACARPGADVHAAAHGPGEASAMQSLIKYS
GSFTREAVAVRPGGCGKKSPFGGLGTMKPEPAPTTAGAPRTQARLPHPGGPAAGGGRQLK
RDPERPESAKAFGREGSGAQGEAEVRHPPVGIAVAVARQKDSGGSGRLGPGLADQERSLS
LSNVKGHSRADGDCGDERTRHREERLLGARLDRDQEKLLRESKELADLARLHPTSCAANG
LNPNLMVTGGPSLAGSGRWSADPAAHLGTHPWLPRSGSTSMWLAGHPYGLGPPPLHQGMA
PAFPPGLGGSLPSAYQFVRDPQSGQLVVIPSDHLPHFAELMERAAAPPLWAALYPPGRGP
LHHAQQLQLFSQQRFLRQQELLYLQQQAAQALELQRSAQLVQERLKAQEHRVEMEEKVSK
RSLEAAGKAGLAAPGPGLLPRKPPGLAAGPTGTYGKAMSPPPSPRASPVAALKAKVIQKL
EDVSKAPTYAYPATPSSHPSSPPPASPPPTPGITRKEEAPENVVEKKDLELEKEAPSPFQ
ALFSDIPPRYPFQTLPPHYGRPYPFLLQPTAASDADGRAPDVPLPADGPERLALSPEDKP
IRLSPSKIPEPLREGPDEEPLVEREVKAEVEDVDDGPAEVPSLESPLTLAPEEALAAPSP
VAGCGSGLLEAQALSASGQGGMEPPGGPDFAEGAEARVDSPGRTEPCTATPDLGVRLTPE
TLVEAKEEPVEVPVDMPMAVSMAEAVPEEGLAQAAPSEPRPSLELADCDMPAGDGECLSL
EAREAAPVPSGSCFLEEEGSDQFLPGLEDPLAGMNALAAAAELPQARPLPSPGPGTQALE
KLEAAQSLVLEQSFLHGITLLSEIAELELEKRSQEVGGEPQGAERGPAVRPSLESLLAAS
SHMLKEVLDSPFVDPLKNLRLPRELNPNKKYSWMQKKEERMYAMKSSLESMDAMELDFRM
RLAEVQRRYKEKQRELVKLQRRRDPEDRREEPHRSLARRGPGRPRKRTHALSALSPPRKR
GKSRNSSGKLSSKPLLTSEEYELGAGMRKRHKGPEEEHDGLVATGKARGRSQPWDEHESS
SDFMSQLKIKKKKMASDQEQLASKLDKALSLTKQDKLKSPFKFSDSSGGKSKASGGCGRY
LTPYDSLLGKDRKALAKGLSLSLKASREGKHKRAAKARKMEVGFKARGQPKSAHSPFASE
VSSYSYNTDSEEDEEFLKDEWSAQGPSSSKLTSSILCGMVAKNKPPGGSKLTKRGLAAAR
TLKPKPAAGRKQPFCLLLQEVEARSSFSDSSEDSFDQDESSEEEDEEDELEEEEEAAGGY
RLGARERALSPGLEESGLGLLARFAASALPSPTVGPSLSVVQLEAKQKARKKEERQNLMG
TEFEYTDSESEVKVRKRSPTGLLRPKKGLGEPGPSLASPAPSARGPGPTSPDKAKLAAEK
GRKTRKLRGAKEPGFEAGPEASDDDLWTRRRSERIFLHDASAAAPAPSSAAPAATKPSRC
GKGGPLSPRKDTSRAKDRKDPRKKKKGKEAGSGAALPPPRVPALPPDARAPHTGSPAAAK
RSKAKAKGKEVKKENRGKGGAVSKLMESMAAEEDFEPNQDSSFSEDEHLPRGGAVERPLT
PAPRSCVIDKDELKDGLRVLIPMDDKLLYAGHVQTVHSPDIYRVVVEGERGNRPHIYCLE
QLLQEAINDVRPASTRFLPQGTRIAAYWSQQYRCLYPGTVVRGLLGLEDDGDLITVEFDD
GDTGRIPLSHIRLLPPDYKIQCAEPSPALLVPSAKRRSRKTSKDTGDSKDGGTLGTEEPG
AKARGRGRKPSTKAKSDRAAVPEEGGPTEEVPSTPLALEPLSTLSSKKSPPESADKRAKA
PKARPAPPQPSPAPSTFTSCPAPEPFGELPAPTTVLAPAPLVAMPITMPATRPKPKKARA
AEEAAPKGPRRPGEEAELLVKLDHEGVTSPKSKKAKEALLLREDTGAGAWQEPKGLLTLG
GYPSAAGGGEPKAARPKAADGELAQEPGAGLEFESSGHPKSPDKGQAEQDGAEESESGGS
SSDSGGSSSSSSETEGEDEAQGGGGRNCSASSSRASSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDDSSCSSDDEAAPAPAAGPSAAPALPSK
TPKPAGKGRSSAHSPGKKVPAPPPQAPPPQAPPPQPPQPLPAKAQAGAGAKSRPKKREGV
HLPTTKELAKRQRLPSVENRPKIAAFLPARQLWKWFGKPTQRRGMKGKARKLFYKAIVRG
KEMIRIGDCAVFLSAGRPNLPYIGRIQSMWESWGSNMVVRVKWFYHPEETSPGKRLHEGQ
HWDQKSGRSLPAALRASSQRKDFMERALYQSSHVDENDVQTVSHKCLVVGLEQYEQMLKT
KKYQDSEGLYYLAGTYEPTTGMIFSTDGVPVLC
NT seq
8922 nt
NT seq
+upstream
nt +downstream
nt
atggatggccgagacttcgggcccccgcggtccgtgcacggccccccgccgccgctgctg
tccggcctggctatggacagccaccgcgtgggcaccgctgcggccggacgcctgcccgct
tctggcttgcccggcccgctgccgcccgggaagtacatggccggcctcaatctccacccg
cacccgggcgaggccttcttgggcagctttgtggccagcgggatggggccctcagcctca
tcccatgggagccccgtgcccctgccctctgacctctccttccgctcccctacccccagc
aacctgcctatggtacagctgtgggccgctcacgcccatgaaggcttctcccatctgccc
agcgggctgtacccatcctacctccacctgaaccacctggagccccccagcagcgggagc
cccctcctcagccagctgggccagcccagcatcttcgatacccagaaagacggcttctac
ctgcccgccccgggggctccgggcgccctgcactcccacgcgccctcctccaggaccccg
ggcggccactcctccagcgccccggccaaaggctcttcgcgagaaggcccagccaaggag
cgggctggccgcggcggggagccgcccccgctgttcggcaagaaggacccgagggcccgc
gaggaggctgcggggccgcgcggcgtggtggacctgacccaggaggcgcgggcggagggg
cgccaggaccgcgggcccccgcgcctcgccgagcgcctatcgcccttcctggccgaactg
gggccgccgcgcgggccgggcgccgccgccgagtgcaagggcaagaacccgccaccgccg
ccgccgccccccgcgctgagcctctgcaacggcgcgggcgacgcagggctccccgcgctg
gtggccaaggaggcggcgcgccaggacgagagcgcgcggctccggcgcgcagaggccctg
ctgcccgggccgtgcccttgcccctcgccgctcccgccgccgcccaagggcccgcccgcg
cccccgaccgccccggcgggggccttcgccgcgccgcagcccgcgtccgccggcgtctac
accatcttcccagcggcggcggcggcggcgcgcgagccgggccgcgagcaccgcgtggtg
gcgcccaccttcgtgccttccgtggaggccttcgacgagcgcccggggcccatccagatc
gcgtcgcaggcgcgggacgcccgggcccgggagcgcgaggcgggcaggcccggcgtcctg
caggcgccgcccgggtccccgcggccgccccccgagcggcccgaggcgctccgcgagaag
aactcggtcatccgctctctcaagcggccgccacccgccgaggccccgccggcgcgggcc
gcgcgcgcctccccggacgcccgggcctacctccctgccaaggagctgctcaagcccgag
gccgagccgcgggcctgcgagcgcgccccccgcggccccgccgccgccccccagcaggcc
gccaagctgttcggcctggagcccgcgcggccaccgccgccgcccgccggccctgagccc
aagtggaagcctttcgagctgggcaacttcgccaccacgcagatggccgtgctggccgcg
cagcaccatcacgccagccgcgccgaggaggaggcggccgcctccaagaaggcctacctg
gaccccgggggcgcgctgccccgcgccgcggccgcctgcgccaggcccggcgccgacgtg
cacgccgcggcccacgggccgggggaggcctccgccatgcagagcctcatcaagtacagc
ggcagcttcacccgcgaggccgtggccgtgcgccctggcggctgcggcaagaagagccct
ttcggaggcctgggcaccatgaaacccgagcctgcccccaccaccgcgggcgccccgcgc
acccaggcccgcctgccacaccctggcggccctgcggccggtggaggccggcagttgaag
cgggacccggagaggcccgagagcgccaaggctttcgggcgtgagggctctggggcccag
ggagaggcagaggtgcgacacccgcccgtgggcattgcggtggccgtagcccggcagaag
gacagtggcggcagtggccggctggggcctgggctggcagaccaggagcgctccctgtcg
ctgagcaacgtcaaagggcacagccgagccgatggtgactgtggggatgagaggaccagg
caccgagaggagcggctgttgggggcgcggctggaccgagaccaggagaagctcctcaga
gaaagtaaggagctggctgacctggcccgcttgcaccccaccagctgtgctgctaatggc
ctgaaccctaacctcatggtgaccggtggcccatcgctggcaggctccgggcgctggtcc
gccgaccccgcagcccacctgggcactcatccctggctgccccgctcgggtagcacgtcc
atgtggctcgccgggcacccctacggcttgggcccacctcctctgcaccagggcatggcg
cccgccttcccgcctggcctggggggctccctgccatcagcttaccagttcgtgagggac
ccccagtcgggccagctggtggtcattcccagcgaccacctgcctcactttgcggagctg
atggagcgggccgctgcgcccccgctctgggctgccctgtacccgccgggccgcggcccc
ctgcaccacgcccagcagctgcagctcttctcccagcagcgcttcctgcggcagcaggag
ctcctgtacctgcagcagcaggcggcccaggccctggaactgcagaggagcgcccagctc
gtgcaggaacggctgaaggcccaggaacatcgggtggagatggaggagaaggtgagcaag
cggagcctggaggctgcaggcaaggccggcctggctgccccaggccctgggctgctgcct
cggaagccccccggcctggctgctggccccacgggcacctacggcaaggccatgagcccg
ccaccatctccccgcgcttcccctgtggctgccctgaaggccaaggtcatccagaaactg
gaggatgtgtccaaggcacccacctatgcctaccccgccacgcccagctcccaccccagc
agcccgccgcccgcctccccgccgcccactcctggcatcacccgcaaggaggaggcgcct
gagaatgtcgtggagaagaaggacttggagttggagaaggaagcgcccagccccttccag
gccttgttctcggatatcccacccaggtacccgtttcaaaccctgccgccgcactacggg
aggccctacccgttcctgctgcagcccacagcggcctccgatgccgacggccgggcccct
gatgtgccgctcccggccgatgggcccgagcgcctggcgctgtcgcctgaagacaagcct
atccgcttgtccccctccaagatcccagagcctctgcgcgagggccccgacgaagagccg
ctggtagaacgggaggtgaaggccgaggtggaggacgtggacgacggccctgcagaggtg
ccctccttggagtctcccctgacattggctcccgaggaagccctggcagccccaagcccc
gtggctggctgtggaagtggtctgttggaggcccaggcgctgagcgccagcgggcagggg
ggcatggagccccccgggggcccggacttcgcggagggggccgaagcgcgggtcgattcc
ccaggccggacagaaccgtgcacagccaccccggacctgggggtgcgactgacaccagag
acactggtcgaggccaaggaggagcccgtggaggtgcccgtcgatatgcccatggctgtg
tccatggcggaggcggtgcctgaggagggcctagcacaggcagccccgagcgagccccgg
cccagcctggagttggcagactgtgacatgcccgccggggacggggagtgcctgagtctg
gaggccagggaggccgcacctgtgcccagcggctcctgcttcctggaggaagaaggctcc
gaccagtttctgcccggcctggaggacccactggctggtatgaacgctctggcggcagct
gcggaactgccccaggccaggcctctgccctccccgggccctggcacccaggccctggag
aagctggaggcagcacagagcctggtcctggagcagagtttcttgcacgggatcaccctg
ctgagcgagattgccgagctggagctggagaagaggagccaggaggtgggaggtgagcca
caaggtgcagagcggggcccagcggtgcggccctcgctggagagcctgctggcagccagc
agccacatgctgaaggaggtgttggacagccccttcgtggacccacttaagaacctgcgg
cttccgcgggagctgaaccccaacaagaagtacagctggatgcagaagaaggaggaacgg
atgtatgccatgaagtcgtccttggaaagcatggacgccatggagctggacttccggatg
cggctggccgaggtccagcggcggtacaaggagaagcagcgagagctggtgaagctgcag
agacgccgtgaccccgaggacaggcgcgaggaaccccatagaagcttggcacgcagaggc
cctggcaggccgaggaaacggacccacgccctgagcgccctgtcgcccccccgcaagaga
gggaagagccgcaacagtagcggaaagctgagcagcaagcctctgctgacgtcggaggag
tacgagcttggagcaggcatgaggaagaggcacaagggacctgaggaggaacatgatggc
cttgttgccacggggaaagcgaggggcaggagccagccttgggacgaacacgaatcctca
tcagatttcatgagtcagctgaagattaaaaagaaaaagatggccagtgaccaggagcag
ctggccagcaagctggacaaggccctgtcgctcacgaagcaggacaagctcaagtcgccc
ttcaagttctcggacagctctgggggcaagtccaaagcgagcgggggctgcggcaggtac
ttgacgccctacgacagcctgctgggcaaggacaggaaggcgctggccaaaggcctcagt
ctgtccctcaaagcctccagagaaggtaaacacaaaagggccgccaaagccaggaagatg
gaggtgggcttcaaggccagaggccagcccaagtcggcccactccccgttcgcctcagaa
gtgagcagctactcctacaatacggactcagaggaagacgaagaattcctgaaggacgag
tggtctgcccaaggcccgtccagctccaaactgacgtcttccatcctgtgtggcatggtg
gcaaagaacaagccccccggaggctccaagctgaccaagaggggcctggcggccgcccgg
actctgaaacccaagccggccgccggcaggaagcagcccttttgtttgctgcttcaagag
gtcgaggcccgttcctccttcagcgattcctcggaggactcgtttgaccaagatgagagc
tccgaggaggaggacgaggaggatgagctggaggaggaggaggaggccgccggcggctat
aggctgggggcccgagagcgggccctgtcgccaggcctggaggagagtgggctgggcctg
ctggctcgctttgcagccagcgccctccccagccccacagtggggccatcgctatcagtg
gtgcagctggaggccaagcagaaggcccggaagaaggaagagcggcagaacctgatgggc
acggagttcgagtacacggactcggagagtgaggtcaaggtgcggaagcggtcgcctacc
gggctgctgcggcccaagaagggactaggggagcccgggccctccctggcctcccctgca
cccagcgcccggggccctggtcccaccagccccgacaaggccaagctggcggcagagaaa
gggcgcaagacccgcaagctgaggggcgccaaggagcccggctttgaggcggggcccgag
gccagcgacgacgacctgtggacacggcggcggagcgagcgcatcttcctgcatgacgcc
tcggccgccgccccagcccccagcagcgctgcccctgctgccaccaagcccagccgctgc
ggcaagggtggcccgctgagcccccgcaaggacaccagccgtgccaaggacaggaaggac
cccaggaagaagaagaaggggaaggaggctggctcaggggctgcgctgcccccaccccgt
gttcccgccctgccccccgacgcccgggctccccacaccggctccccggccgctgccaag
aggagcaaggccaaggccaaagggaaggaggtgaagaaggagaatcgggggaagggggga
gctgtgagcaagctgatggagagcatggctgccgaggaggacttcgagcccaaccaggac
tccagcttctccgaggatgagcacctgccccgcggcggggccgtggagcggccgctaact
ccggccccgcgctcctgcgtcatcgacaaggacgagctgaaggacggcctgcgtgtgctc
atccccatggacgacaagctgctgtacgcgggccacgtgcagacggtgcactctcccgac
atataccgtgtggtggtggagggtgaacgtgggaaccggccccacatctactgtttggag
cagctgctgcaggaggcgatcaacgatgtgaggccggcctccacccgcttcctgccgcag
gggaccaggatcgcggcttactggagccagcagtaccgctgcctgtacccgggcaccgtg
gtccgaggcttgctcggcctcgaggatgacggggatttgatcaccgtcgagtttgatgat
ggggacacggggaggatccccctctcccacatccgtctcctgcctcccgactataagatc
cagtgtgcggagccctccccagctctcctggtgccaagtgccaagcgccgcagccggaag
accagcaaagacactggggacagcaaagatggtggcaccctggggacggaggagcccggc
gccaaggcacgagggcgtgggcggaaacccagcactaaagccaagagtgatagagctgct
gtcccggaggaggggggcccaacagaggaggtccccagtaccccgttggccctggagccc
ctcagcaccctgagttccaagaagagccccccagaatctgcggacaagcgggccaaagcc
cccaaggcccgcccagcgcccccccagcccagcccggcaccatccaccttcaccagctgt
ccggctcccgagcccttcggggagctgccggcccccaccacggtcctggcccccgcgccc
ctcgtcgccatgcccatcaccatgcccgccacccggcccaagcccaagaaagcgcgggct
gctgaggaggcggcccccaagggcccccggaggcccggggaggaggccgagctgcttgtc
aagctggaccacgagggcgtgacgtcgcccaaaagcaagaaggccaaagaggccctgctg
ctgcgagaggacacgggggcgggggcctggcaggagcccaagggcctcctgaccctgggc
ggctacccctcggccgcgggcggcggcgagcccaaggctgcccggcccaaggccgcggac
ggcgagctggcccaggagcccggggccgggctcgagttcgagagctcgggccaccccaag
agcccggacaagggccaggcggagcaggacggggccgaggagtcggagagcggcggcagc
agcagcgacagcggcggcagcagcagcagcagctccgagaccgagggggaggacgaggcc
cagggcggcggcggtcggaactgcagcgcctccagctcccgggcgtcctcgtcctcgtcc
tcctcgtcctcgtcctcgtcgtcgtcctcctcgtcttcctcgtcctcgtcttcgtcgtcc
tcctcctcgtcgtcgtcgtcgtcctcgtcgtcgtcctcgtcctcgtcctcctcctcgtcc
tcgtcgtcctcgtcctcgtcctcgtcgtccaccaccgacgactcctcctgcagctccgac
gacgaggcggcgcccgcccccgccgccggcccgtccgccgccccggctctccccagcaag
acgcccaagccggcgggcaaggggcgctcctcggcccactccccgggcaagaaggtgccc
gcgcccccgccccaggcgcccccgccccaggcgcccccgccccagcccccgcagcccctg
ccggccaaggctcaggccggggcgggggccaagagccgacccaagaagagggagggcgtc
cacctcccgaccaccaaggagctggccaagcggcagcgcctgccgtccgtggagaaccgg
cccaagatcgccgccttcctgcctgcccggcagctctggaagtggttcggcaagcccacc
cagcgccgtggcatgaagggcaaggcccgcaagctcttctacaaggccatcgttcgtggc
aaggagatgatccgcatcggggactgcgccgtgttcctgtccgccggccgccccaacctg
ccgtacatcggccgcatccagagcatgtgggagtcgtggggcagcaacatggtggtccgc
gtcaagtggttctaccaccccgaggagaccagcccgggcaagcgcctccacgagggccag
cactgggaccagaagtccggccgcagcctccctgctgccctgcgggcctccagccagagg
aaggacttcatggagcgcgccctctaccagtcctcccacgtggacgagaacgacgtgcag
accgtgtcgcacaagtgcctggtggtgggcctggagcagtacgagcagatgctcaagacc
aagaagtaccaggacagcgagggtctgtactacctcgcgggcacctacgagcccaccacg
ggcatgatcttctccaccgacggcgtgcccgtgctctgctga
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integrated database retrieval system
