Mustela nigripes (black-footed ferret): 132026833
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Entry
132026833 CDS
T09425
Symbol
RBBP6
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6 isoform X1
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mnp04121
]
132026833 (RBBP6)
Enzymes [BR:
mnp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
132026833 (RBBP6)
Ubiquitin system [BR:
mnp04121
]
Ubiquitin ligases (E3)
U-box type E3
132026833 (RBBP6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
U-box
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
132026833
NCBI-ProteinID:
XP_059271126
LinkDB
All DBs
Position
11:22039370..22070315
Genome browser
AA seq
1832 aa
AA seq
DB search
MSCVHYKFSSKLNYDTVTFDGLHISLCDLKKQIMGREKLKAADCDLQITNAQTKEEYTDD
NALIPKNSSVIVRRIPIGGVKSTSKTYVISRTEPVMGTSKAIDDSSASISLAQLTKTANL
AEANASEEDKIKAMMSQSGHEYDPINYMKKPLGPPPPSYTCFRCGKPGHYIKNCPTNGDK
NFESGPRIKKSTGIPRSFMMEVKDPNMKGAMLTNTGKYAIPTIDAGRLLFHKLGTMGHKQ
IDTYFWNRGDVYGATATQITHLREAYAIGKKEKPPFLPEEPSSSSEEDDPIPDELLCLIC
KDIMTDAVVIPCCGNSYCDECIRTALLESDDHTCPTCHQNDVSPDALIANKFLRQAVNNF
KNETGYTKRLRKQLPPPSTPVPTPRPLIQRNLQPLMRSPISRQQDPLMIPVTSSSTHPAP
SLSSLTSNPSSLAPPVPGNSSSTPAPVPDITATVSISVHSEKSDGPFRDSDSKILPAAAL
APEHSKGASSIAITALMEEKGYQVPVLGTPSLLGQSLLHGQLIPTTGPVRINTARPGGGR
PGWEHSNKLGYLVSPPQQIRRGERSCYRSINRGRHHSERSQRTQGPSLPATPVFVPVPPP
PLYPPPPHTLPLPPGVPPPQFSPQFPPGQPPPAGYSVPPPGFPPAPANLSTTWVSSGVQT
AHSNTIPTTQAPPLSREEFYREQRRLKEEEKKKSKLDEFTNDFAKELMEYKKIQKERRRS
FSRSKSPYSGSSYSRSSYTYSKSRSGSTRSRSYSRSFSRSHSRSYSRSPPYPRRGRGKSR
NYRSRSRSHGYHRSRSRSPPYRRYHSRSRSPQAFRGQSPNKRNVPQGETEREYFNRYREV
PPPYDMKAYYGRSVDFRDPFEKERYREWERKYREWYEKYYKIGYATGAQPRPSANRENFS
PERFLPLNIRNSPFTRGRREDYAGGQSHRSRNLGGNYPEKLSTRDSHNQKDNTKSKEKES
ENAPGDGKGNKHKKHRKRRKGEESEGFLNPELLETSRKSREPTTGEENKTDSLFVLPSRD
DATPVRDEPMDAESITFKSVSEKDKREKDKPKAKGDKTKRKNDGSTVSKKENVAKPAKGP
QEKLDGEREKSPRSEPPLKKAKEETPKTDNAKASSSSQKDEKIIGTPRKAHSKSAKEHQE
TKPVKEEKAKKEYSKDVKSEKPTNKEEKAKKPSEKSKPPDGKGDKRKRKTEEKGADKDFE
SSSTKISKLEVTEIVKPSPKRKMEPDIEKMDRTPEKDKISSSTAPAKKIKLNRETGKKIG
STENVSNTKEPSEKLESTSSKVKQEKVKGKVRRKVAGAEGSSSTLVDYTSTSSTGGSPVR
KSEEKTDTKRTVIKTMEEYNNDNTAPAEDVIIMIQVPQSKWDKDDFESEEEDVKTTQPVS
SVGKPASVIKNVSTKPLNTVKYTEKESESSEKIQKLTKEVSHELIQHEIKSSKNSASSEK
GKTKDRDHSVLEKENPEKRKNSAQPEKDSNVDRLNEQGNFKSLSQSSKETRTSDKHDSVR
GSSTKDFTPNRDKKTDYDNREYSSSKRREERNELTRRKDSPSRSKDSSSGQKTKPREERD
LPKKGTGDSKKSNSSPSREKKPHDHKATYDTKRPSEEAKPVDKNPCKDREKHTLEARNNK
ESSGNKLPYVLNPPDPQTEKEQVPGQTDKNAVKPKPQLSHSSRLSSDLTRETDEAAFEPD
YNESDSESNVSVKEEETSGKVSKEVKEKIVEKAKDSLDPAAGGQIGTARSQSQSSPSVSP
SRSHSPSGSQTRSHSSSASSAESQDSKKKKKKKEKKKHKKHKKHKKHKKHAGTEVELEKS
QKHKHKKKKSKKSKDKEKEKEKDDQKVKSVPV
NT seq
5499 nt
NT seq
+upstream
nt +downstream
nt
atgtcctgtgtgcattataaattttcctctaaactcaactatgataccgtcacctttgat
gggctccacatctccctctgcgatttaaagaagcagattatggggagagagaagttgaaa
gctgccgactgcgacctgcagatcaccaacgcgcagacgaaagaagaatatactgatgat
aatgctctaattcctaagaattcatctgtaattgttagaagaattcctattggaggtgtt
aaatctacaagcaagacgtatgttataagtcgaactgaaccagtgatgggaacttcaaaa
gcaattgatgactcttctgcgtctatttctctggcccagcttacaaagactgccaatctg
gctgaagccaatgcttctgaagaagataaaattaaagcaatgatgtcgcaatctggccat
gaatacgacccaatcaattacatgaagaaacctctaggtccaccacctccatcttatacc
tgttttcgttgtggtaaacctggccattatattaagaattgtccaacaaatggggataaa
aactttgaatctggtcctaggattaaaaagagcactggtattcccagaagttttatgatg
gaggtgaaagatcctaacatgaaaggtgcaatgcttaccaacactggaaaatacgcaata
ccaactatagatgctgggagactcctctttcacaaattgggaacaatggggcataagcaa
attgatacttatttctggaatcgtggtgatgtctatggagcaactgcaacacaaataaca
cacctaagagaagcatatgcaattgggaagaaagaaaaaccgcctttcttaccggaggag
ccatcctcttcttcagaagaagatgatccaatcccagatgaactgttgtgtctcatctgc
aaagatattatgactgacgccgttgtcattccctgctgcggaaacagttactgcgacgaa
tgtataagaacagcactcttggaatcagatgatcatacatgtccgacctgccatcagaat
gatgtctctcctgatgctttaattgccaataaattcttaagacaggctgttaataacttc
aaaaatgaaactggttatacgaaaagactacgaaaacagttacctccaccatcgaccccc
gtaccaacgccgagaccactcatccagcggaacctacaacctctgatgagatctccaata
tcaagacaacaggatcctcttatgattccagtgacatcttcatcaactcacccagctcct
tctttgtcttcattaacttctaacccgtcttccttggcccctcctgtgcctggaaattca
tcttctaccccagctcctgtacctgatataactgcaacggtgtccatatcagtccactca
gaaaaatcagatggacctttccgggactctgatagtaaaatactgccagctgcagccctt
gcacccgagcactcaaagggggcctcttcaattgcaattactgctcttatggaggaaaag
ggttaccaggtgcctgtacttggaaccccgtctttgcttggacagtcactattgcatgga
cagttgatccccacaactggtccagtaagaataaatactgctcgtccgggtggtggtcga
ccaggttgggaacattccaataagcttggatatctggtttctccaccgcagcaaattaga
aggggggagagaagctgctacagaagtataaaccgcggacgacaccacagcgaaagatca
cagagaactcaaggcccgtcgctaccagcaactccagtttttgtgcctgtgccaccccct
cctctgtatccgcccccaccccatacacttcctctccctccaggtgtgcctcctccacag
ttctctcctcagtttcctcccggccagccgccacctgctggctatagtgtccctcctcca
ggctttcctccagctccggccaatttatcgacaacttgggtatcgtcaggagtgcagaca
gctcactcaaataccatcccaacaacacaagcacccccgttgtccagggaagaattctat
agagagcaacggcggctaaaagaagaggaaaagaaaaagtccaagctagatgagtttaca
aatgattttgctaaggaattgatggaatacaaaaagattcaaaaggagcgtaggcgctca
ttttccaggtctaaatctccctatagtggttcatcatactcaagaagttcatatacttat
tctaagtcaagatctggttcaacacgttcacgttcttattcgcgatcatttagccgctca
cactctcgttcctattcacgatcacctccataccccagaagaggcagaggcaagagccga
aattaccgttcacggtctagatctcatggatatcatcggtctagatcaaggtcaccccca
tatagacgatatcattcacggtcaagatctcctcaagcctttaggggacaatctcccaat
aaacgtaatgtgcctcaaggggaaacagaacgtgaatattttaatagatacagagaagtt
ccgccaccttatgacatgaaagcttattatgggaggagtgttgactttagagacccattt
gaaaaagagcgttaccgagaatgggagagaaaatacagagagtggtatgaaaagtattat
aaaataggttatgctactggagcacagcctagaccatcagcaaatagagagaacttttct
ccagagaggtttttgcctcttaatatcaggaattctcccttcacaagaggccgcagggaa
gattatgctggtggacaaagtcatagaagtcgaaatttaggtggcaactatccagaaaag
ctttcaacaagagacagtcacaatcagaaggacaacacaaagtcgaaagagaaagagagt
gaaaatgctccgggagatggtaaaggaaacaaacataagaaacataggaaaagaagaaag
ggggaggaaagtgaaggctttctaaaccccgagttattagaaacttctagaaaatcgaga
gaacccacaactggtgaagaaaataaaacagactcattatttgttctcccaagtcgggat
gatgctacacctgttagagatgaaccaatggatgccgaatctatcacttttaaatcggtg
tctgaaaaagacaagagggagaaagacaaaccaaaagcaaaaggtgataagaccaaacga
aaaaatgatggttccactgtgtcaaaaaaggaaaatgttgcaaaacctgccaagggacct
caagaaaaactagacggagagcgtgaaaaatctcctcgatctgaacctccgcttaaaaaa
gccaaagaggagactccaaagactgacaatgctaaagcatcctcttcctcccaaaaagac
gaaaagatcattggtacccccaggaaagctcactctaagtccgcaaaagaacaccaagag
acaaaaccagtcaaagaggaaaaagcaaagaaggagtactccaaagatgtcaaatcagaa
aagcccactaataaggaagaaaaggccaagaagcctagtgaaaaaagtaagccacctgac
ggcaagggagacaaaagaaaaagaaaaactgaagaaaagggtgcggataaagattttgaa
tcctcttcaacgaaaatctctaaactagaagtgaccgaaatagtgaaaccatcaccaaag
cgtaaaatggaacctgatattgaaaaaatggataggacccctgagaaagacaaaatttca
tcatcaactgccccagccaaaaaaatcaagctcaacagagaaactggtaagaaaattgga
agtacagaaaatgtatctaatacaaaagaaccctctgaaaaattggagtcaacatctagc
aaagttaaacaagaaaaagtcaaagggaaggtcagacgaaaagtagctggagccgaggga
tccagctcaacgcttgtggattataccagtacgagctcaactggaggcagtcctgtgcgg
aaatctgaagagaaaacagatacaaaacgaactgtcattaaaactatggaagaatataat
aatgacaatacagctcctgctgaagatgttattattatgattcaggttccccagtccaaa
tgggataaagatgactttgaatctgaagaagaagatgttaagaccacccagcctgtgtca
agtgtaggaaaacctgccagtgttattaaaaatgtcagcactaaacccttaaatacagtc
aagtacactgaaaaagaaagtgagtcatcagagaaaattcagaaactcaccaaggaagtg
agccatgaacttatacagcatgagatcaaaagttcaaaaaactctgcatccagtgaaaag
gggaagaccaaagatcgagatcattcagtgttggagaaggaaaaccctgagaagaggaag
aacagcgctcagccagaaaaagatagtaacgtggaccgtctgaatgaacaagggaatttt
aaaagtctgtctcaatcttccaaagagacaagaacttcagataagcatgattccgttcga
ggttcttcaactaaagactttacccccaacagagacaaaaaaaccgactatgacaacaga
gaatactcaagttccaaacgtagagaggaaagaaatgaattaacaagaaggaaagactct
ccttctcgaagtaaagattcttcatctggacagaaaactaagccaagggaggagagagat
ttgcccaaaaaaggaacaggagattccaaaaagagcaattccagtccctcaagagagaaa
aaacctcatgatcacaaagccacttacgatacaaaacgcccaagtgaagaggcaaaacct
gtagataaaaatccttgtaaagatcgtgagaagcacacattagaagcaaggaacaataaa
gagtcaagtggcaataaattaccgtatgtgcttaacccaccagacccacagactgaaaaa
gagcaagttcctgggcagactgacaagaatgcggtgaagccgaaaccgcagttaagtcac
tcctcccgactttcctccgacttaactagagagactgatgaagctgcttttgaaccagac
tataatgaaagtgacagtgaaagcaatgtgtctgtgaaagaggaggaaacttcgggaaaa
gtttctaaggaagtgaaagagaaaatcgtggagaaagcaaaagacagcctggacccggca
gcaggcggccagataggcacagccaggagccagagccaaagcagccctagtgttagtcca
agtcgaagtcatagcccttctggaagccagacccgaagccacagcagtagtgccagctct
gcagagagtcaggacagcaagaagaagaagaagaaaaaggaaaagaaaaagcacaagaaa
cacaaaaaacataagaagcataagaagcatgcaggcactgaagtagaattggaaaaaagc
caaaaacacaaacacaagaaaaagaagtccaagaagagcaaagataaagaaaaggagaag
gagaaagatgaccaaaaagtgaaatctgtccctgtataa
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integrated database retrieval system
