Mustela nigripes (black-footed ferret): 132026903
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Entry
132026903 CDS
T09425
Symbol
CIITA
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04612
Antigen processing and presentation
mnp05145
Toxoplasmosis
mnp05152
Tuberculosis
mnp05164
Influenza A
mnp05340
Primary immunodeficiency
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09151 Immune system
04612 Antigen processing and presentation
132026903 (CIITA)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
132026903 (CIITA)
09171 Infectious disease: bacterial
05152 Tuberculosis
132026903 (CIITA)
09174 Infectious disease: parasitic
05145 Toxoplasmosis
132026903 (CIITA)
09163 Immune disease
05340 Primary immunodeficiency
132026903 (CIITA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mnp01001
]
132026903 (CIITA)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mnp04054
]
132026903 (CIITA)
Enzymes [BR:
mnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
132026903 (CIITA)
Protein kinases [BR:
mnp01001
]
Serine/threonine kinases: Other
TAF1 family
132026903 (CIITA)
Pattern recognition receptors [BR:
mnp04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
132026903 (CIITA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
NLRC4_HD2
LRR_14
LRR_8
LRR_9
CARD
Motif
Other DBs
NCBI-GeneID:
132026903
NCBI-ProteinID:
XP_059271301
LinkDB
All DBs
Position
11:complement(30558696..30604076)
Genome browser
AA seq
1205 aa
AA seq
DB search
MNHFQSILTRVQMLLSGRRPSQVQALLDHMLEKELLSREYHCALLREPDGEALARKISLT
LLERGDPDLALLRWAWSGWQLPVAERDPGSDHGGSGQCAAMDLGPLEGGYLELLNSSADP
LQLYHLYDQTDLAREELELCSEPDMDTINCEQFSKLLCDIEGDEETREAYANIAELDQYV
FQDSQLDGLGEDIFIEHIGLDEIISENVEVLEEAGQKSQKRPFPEELPMDLKHRKLAEPV
TVSMVTGTFLVGPVSDSSALPCLSPPAVFNKEPESSPSWMEETVLMPVPPSSSLLGCLPA
GPIQIVPSLPSLPQGLWQISGPGTGVSSMVIYQGEMPQASQVLSSSGPAVQSLPKSPDRP
GSTSPFAPSATDLPGMPEPALTSRANTTEDQKSPTQGLATHEVSSKPPKWPERVEQFCRS
LRDKYQAEPADPEGILVEVELVRARLERSSDKSQERELATPDWAERQLARGGLAEVLLAA
GDRRRPRETQVIAVLGKAGQGKSRWAREVSRAWACGQLPQYDFVFYFPCHCLDRAGDSYR
LQDLLFCLGPQPQPADEVFSHVSRRPDRVLLILDAFEGLEGQDGLLHSAGGPVSTEPHSF
RGLLAGLFQRKLLRGCTVLLTARPRGRLAQSLSKADVLFEVTGFSTQQAETYMTRYLERV
GGTERRERALALLRRRPFLLSLSHSPTVCRAVCQLSEALLELGGEAELPSTLTGLYVGLL
SPAARGSPPGALEGLARLAWELGRRHRGTLRDSQFPSAEVRAWAVARGLVQPVPGAPDSE
LAFSSFLLQCFLGAVWLALSTEIKDKELPQYLALTPRKKRPYDNWLEGVPRFLAGLLFQP
HADGLGALAGPAGAAVGARKQKVLSRYLKRLQPGMLRAGRLLELLHCAHEAADAGLWQHV
VQGLPARLSFLGTRLTPPNAYVLHSALEAAGRDFSLDLRSTGIDPAGLGSLVGLRCVTHF
RASLSDTVGLWESLQQRGETELLQAVEEKFTIEPFKANSPKDVEDLGNLVQIQRTRSSSE
DTAGELPAVRDLKKLEFALGSVSGPRAFPKLVRILEAFSSLQHLDLDSLSENKIGDEGVE
QLSATFPRLKALETLNLSQNSITDVGACKLAEALPSLASSLLRLSVYNNSICDVGAESLA
HVLPDMVSLRVLDVQYNKFTAAGAQQLAASLRKCPHVETLAMWTPTIPFGVHEHLQQLDS
RISLR
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgaaccacttccagagcatcctgacgcgggtccagatgctgctgtccggccgtcggcca
agtcaggtgcaggccctcctggaccacatgctggagaaggagctcctgtcccgggagtac
cactgtgccctgctccgcgagcctgatggcgaggccctggccaggaagatctccttgacc
ctgctggagagaggagacccagacttggccctcttgaggtgggcgtggagtgggtggcag
ctcccggtggccgagagggaccctggctcggaccatggtggcagtgggcagtgtgctgcc
atggacctggggcctctagaaggcgggtacctggagcttctcaacagcagtgctgatccc
ttgcagctctaccacctctatgaccagacggacctggctagagaagagcttgagctctgc
tcagaacccgacatggacaccatcaactgcgagcagttcagcaaactgttgtgtgacatc
gaaggtgatgaagagaccagggaggcttatgccaatatcgcggaactggaccagtacgtg
tttcaggactcccagctggatggtctgggcgaagacatttttatcgagcacataggactg
gatgaaataatcagcgagaatgtggaggtgctggaggaagcagggcagaaaagtcagaaa
agacccttcccagaggagctgcccatggacttgaagcacaggaagctagccgagcccgtc
actgtgtccatggtgactggcacgttcctggtggggccagtgagcgactcctcagcactg
ccctgcctgtcacctcctgctgtgttcaacaaggagccagaatccagcccgagttggatg
gaggagaccgtcctgatgcctgtgcccccttctagttccttgctggggtgccttcctgct
ggacccattcagattgtccccagcctcccctctctgccccaggggctctggcagatctca
gggcctgggacaggggtgtccagtatggtcatctatcaaggcgagatgccccaggccagc
caagtgctttcttccagtggcccagctgtgcagagcctccccaagtctccagatcggcct
ggctccaccagcccctttgctccgtctgcaactgaccttcctggcatgccagaaccagcc
ttgacctcccgtgcaaatacaacagaggaccagaagtcccctacccagggcctggcgact
catgaggtctccagcaagcctccgaaatggcctgagagagtggagcagttctgccgttcc
ctccgggacaagtaccaggctgagcccgcagacccggaaggcatcctggtggaggtggag
ctggtgagggcgcggctggagaggagcagcgacaagagccaggagcgggagctggccacc
ccggactgggcggagcggcagctggcccgcggcggtctggctgaggtgctgctggctgcc
ggggaccgccggcggccgcgggagacgcaggtgatcgccgtgctgggtaaagccggacag
gggaagagccgctgggcccgggaagtgagccgcgcctgggcctgcggccagctgccccag
tacgacttcgtcttctacttcccctgccactgtctggaccgcgcgggggacagttaccgc
ctgcaggatctgctcttctgcctgggcccccagccacagcccgcggacgaggtcttcagc
cacgtctcgaggaggcccgaccgggttctgctcatcctggacgccttcgagggccttgaa
ggccaagacggcctcctgcacagcgcaggcggacccgtgtccacagagccacactccttc
cgggggctgctggccgggctcttccagcggaagctgctgcgaggctgcactgtactgctc
acggcccggccccggggccgcctggcccagagcctcagcaaggccgacgtcctgttcgag
gtgaccggcttctccacccagcaggccgagacctacatgacccgctacctggagcgcgtc
gggggtaccgagcgccgagagcgagccctggcgctcctccgccgccggcccttcctgctc
agcctcagccacagtcccaccgtgtgccgggccgtgtgccagctctccgaggccctcctg
gagctgggtggcgaggccgagctgccctccacgctcacgggactctatgtggggctgctg
agccctgcggcccgcggcagccccccgggggccctggagggactggccaggctggcctgg
gagttgggccgcagacaccgtggcaccctgagggacagccagttcccatcagcggaggtg
agggcctgggccgtggcccgaggcctggtgcagcctgtcccgggggccccggactcggag
ctggccttctccagcttcctcctgcagtgcttcctgggagccgtgtggctggctctgagc
actgagatcaaggacaaggagctgccgcagtacttggccttgaccccaaggaagaagagg
ccgtatgacaactggctggagggcgtgccacgcttcctggctgggctgcttttccagcct
cacgccgatggcctcggagccctggcgggaccggcgggggccgccgtgggggccaggaag
cagaaggtgctcagcaggtacctgaagcggctgcagcccgggatgctccgggccgggcgg
ctgctggagctgctgcactgtgcccacgaggctgcggatgctgggctctggcagcacgtg
gtgcaggggctcccggcccgcctctccttcctgggcacccggctcacaccgcccaacgcc
tatgtgctgcacagcgccttggaggcggccggccgagacttctccctggacctccgcagc
actggcatcgaccccgctgggctggggagcctcgtgggactccgctgtgtcacccatttc
agggcttcgctgagtgacacggtgggcctgtgggagtctctacagcagcgtggggagacc
gagctgctccaggcagtggaggagaagttcaccatcgagcctttcaaggccaactcccca
aaagatgtggaagacttgggcaacctcgtgcagatccagaggacaaggagttcctcggaa
gacacagctggagagctccctgccgtccgggacctgaagaagctggagtttgcgctgggc
tccgtctcaggcccccgggcttttcccaaactggtgaggatcctcgaggccttttcctcc
cttcagcatctggacctggactcgctgagtgagaacaagatcggggatgagggtgtcgag
cagctgtcagccactttccctcggctgaaggccctggagactctcaacttgtcccagaac
agcatcactgatgtgggtgcctgcaagctcgccgaggccctgccctccctggcttcatcc
ctcctcaggctgagcgtgtacaataacagcatctgtgatgtgggagcggagagcctggca
catgtgcttccagacatggtgtccctccgggtgttggatgtccagtataacaagttcacg
gccgccggggcccagcagctcgccgccagcctgagaaagtgccctcacgtggagacactg
gcgatgtggacgcccaccatcccgtttggtgtccatgaacacctacagcagctggactca
cggatcagcctcagatga
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