Mustela nigripes (black-footed ferret): 132026984
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Entry
132026984 CDS
T09425
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
KO
K13175
THO complex subunit 6
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132026984 (THOC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mnp03019
]
132026984 (THOC6)
03041 Spliceosome [BR:
mnp03041
]
132026984 (THOC6)
Messenger RNA biogenesis [BR:
mnp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
132026984 (THOC6)
Spliceosome [BR:
mnp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
132026984 (THOC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WDR55
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML
Beta-prop_EML_2
NBCH_WD40
Beta-prop_IP5PC_F
WDR54
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_EIPR1
Beta-prop_SPT8
Beta-prop_SCAP
Beta-prop_DCAF4
Phage_zn_bind_6
Motif
Other DBs
NCBI-GeneID:
132026984
NCBI-ProteinID:
XP_059271534
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All DBs
Position
11:complement(36889821..36892958)
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AA seq
341 aa
AA seq
DB search
MERAVPHAVPLGQMEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAIFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWAEILKKGCKELWRRQPPY
RTSLEVPEINALLLVPKENSLILAGGDCQLHTMDLETGAFTRALRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRIAKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGRCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPAAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagctgtgccacacgcggtacctctgggtcagatggaagtgtttcaggccctg
cagaggctccacatgaccattttctcccagagtgtctcaccctgtgggaagttccttgca
gctggcaacaattacgggcagatcgccatcttcagcttgtctgctgctttgagttctgag
gccaaagaagaaagtaagaagcccgtggtcacattccaagcccatgatgggcctgtctac
agcatggtctccactgatcgacacctgctcagtgctggggatggggaggtgaaggcctgg
ctttgggcagagatcctcaagaagggctgtaaggagctgtggcggcgtcagcctccatac
aggaccagtctcgaagtgcccgagatcaatgctttgcttctcgtccccaaggagaattct
ctcatcctggcagggggagactgtcagttgcatacgatggaccttgagactggggccttc
acacgggctctccggggccacacagactatatccactgtctggcactgcgggagcggagc
cctgaggtgctgtcgggtggtgaggatggagccgtgcgactttgggacctccgcatagcc
aaggaagtccagaccatcgaggtgtataagcatgaggagtgctcgagaccccacaatggg
cgttggatcggatgtctggcaacggactcagactggatggtctgtggaggcggcccagca
ctcaccctctggcacctccgatcctccacgcccaccaccattttccccatgcgggcacca
cagaaacacgtcaccttctaccaggacttgattctatctgctggccagggccgctgtgtc
aaccagtggcagctgagtggggagctgaaggcccaggtgcctggctcttccccagggctg
cttagccttagtctcaaccagcagccagcagcacccgagtgcaaggtcctgacagccgcg
ggtaacagctgccgggtggatgtcttcaccaatctgggctaccgcgccttctccctgtcc
ttctga
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integrated database retrieval system
