Mustela nigripes (black-footed ferret): 132027008
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Entry
132027008 CDS
T09425
Symbol
ABCA3
Name
(RefSeq) phospholipid-transporting ATPase ABCA3 isoform X1
KO
K05643
ATP-binding cassette, subfamily A (ABC1), member 3
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
132027008 (ABCA3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mnp02000
]
132027008 (ABCA3)
Transporters [BR:
mnp02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
132027008 (ABCA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_23
AAA_22
AAA_15
RsgA_GTPase
AAA_29
AAA_27
Motif
Other DBs
NCBI-GeneID:
132027008
NCBI-ProteinID:
XP_059271607
LinkDB
All DBs
Position
11:37391135..37430136
Genome browser
AA seq
1702 aa
AA seq
DB search
MAVLRQLGLLLWKNYTVQKRKVLVTALELFLPLLFSGILIWLRLKIQSENVPNATVYPGQ
SIRELPLFFSFPPPGDAWELAYVPSQSDAVKTITEMVRKALVINMRARGFPSEKDFEDYI
RYDNHSSNVLAAVVFEHTFNHSAEPLPLAVKYHLRFSYTRRNYMWTETGSFFLKETEGWH
TTSLFPLFPNPGPREPAAPDGGEPGYIREGFLAVQHAVDRAIMQYHANASARQLLEKLTV
TAKRFPYPPFISDPFLAAVQYQLPLLLVLSFTYTSLTAIRAVVREKETKLKEYMRMMGLS
SWLHWSAWFLLFFLFLLVAVSFVTLLFCVQVKKGVAVLTHSDPSLVLVFLLCFATSSISF
SFMVSTFFSKANMAAAIGGFLYFFTYIPYFFVAPRYNWMTLSQKLLSCLLSNVAMAMGAQ
LIGKFEAKGVGVQWRDLLSPVNVDDNFSFGQVLGMLLLDSVLYGLVTWYVEAVLPGEFGV
PQPWYFFIMPSYWCGHPQTVLGKEEEDDDPEKVLRTEYFEAEPEDLVAGIKIKHVTKVFR
VGNKGKVAVRDLNLNLYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYINGYEISQD
MVQIRKSLGLCPQHDVLFDNLTVAEHLRFYAQLKGLSRRKCPEEVQRMLHVLGLEDKQDT
LSRFLSGGMRRKLSIGIALIAGSKVLMLDEPTSGMDALSRRAIWDLLQQHKSDRTMLLTT
HFMDEADLLGDRVAIMAKGELQCCGSSMFLKRKYGAGYHMTLVKEPHCDPEAISRLVQHH
VPTATLESRAGAELSFVLPKESTHRFEGLFSKLEKQRKELGVASFGASVTTMEEVFLRVG
KLVDSSMDIQAIQLPALQYQHERRASDWAVDSHLCGAMDPTNGVGSLIEDECTTAKLNTG
LALHCQQFWAMFLKKAAYSLREWKMVVAQVLVPLTCVTLALLAVNYSSETFDDPKLELTL
GAYGRTVVPFAVPGASRLDQQLAERLKGMLQASGQEPREVLGDLEEFLIFRASVEGGGFN
ERCLVAVSFRDVGEWTVVTALFNNQAYHSPATALAIVDNLLFKQLCGPLASIVVSNYPQP
RNTLQAAKDQFNEGRKGFDIALNLLFAMAFLASTFSILAVSERAVQAKHVQFVSGVRVAT
FWLSALLWDLMSFLVPSLLLLVVFKAFDVHAFTRDGHMADALLLLMLYGWAIIPLMYLMN
FCFSGPAAAYTRLTIFNILSGVATFLMVTIMRIPAVKLEELSRTLDHVFLVLPNHCLGMA
VSSFHENFETRRYCTSSEVAAHYCKKYNIQYQQNFYAWSAPGVGRFVTSMAASGFAYLSL
LFLIETDTLWRLKTCLCAFRRRRALMEARTSAPPEDQDVVEERNRVLAPSMDSLLDTPLV
IKELSKVYEQRAPLLAVDKISLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDAFV
GGYSISSEIGKVRQRIGYCPQFDALLDHMTGRETLVMYARLRGIPERHVAACVENALRGL
LLEPHADKLVRTYSGGNKRKLSTAIALLGEPSVIFLDEPSTGMDPVARRLLWDTVARARE
SGKAIVITSHSMEECEALCTRLAIMVQGQFKCLGSPQHLKSKFGSGYSLQAKVRGDGQQE
ALEEFKAFVTLTFPGSVLEDEHQGMVHYHLPGDDLSWAKVFGVLEKAKEKYAVDDYSVSQ
ISLEQVFLSFAYLQPPAEDEGP
NT seq
5109 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgctccggcagctagggctcctgctctggaagaactacacagtgcagaagcgc
aaggtcctggtgaccgccctggagctcttcctgcccttgctgttctcggggatcctgatc
tggctccgcttgaagatccagtcggaaaacgtgcccaatgccaccgtctaccccggccag
tccatccgggaactgcccctattcttcagcttccccccgccgggcgatgcctgggagctc
gcctatgtcccatcccagagcgacgccgtcaagaccatcacggagatggtgcggaaggct
ctggtcatcaacatgagagctcgcggctttccctccgagaaggactttgaggactacatc
aggtacgacaaccactcctccaacgtgctggccgccgtggtgttcgagcacaccttcaac
catagcgcggagcccctgccgctggcggtgaagtaccacttacggttcagctacacacgg
aggaactacatgtggacagaaacaggctcctttttcctgaaagagacagaggggtggcac
accacttcactcttcccacttttcccaaacccaggaccaagggaaccagcggcccccgac
ggtggagaacctgggtacatccgcgagggcttcctggccgtgcagcatgcggtggaccgg
gccatcatgcagtaccatgccaacgcctccgcgcgccagctgctcgagaagctcaccgtg
accgcgaagaggttcccctacccgcccttcatctcggaccccttcctggcggccgtccag
taccagctgccgctgctgcttgtgctcagcttcacctacacgtcgctcaccgccatccgg
gccgtcgtgcgggagaaggagacgaagctcaaggaatacatgcgcatgatggggctcagc
agctggctgcactggagcgcctggttcctcctgttcttcctcttcctcctcgtggccgtc
tccttcgtgaccctcctcttctgtgtccaggtgaagaagggcgtggcggtgctcacccac
agcgacccctcgctggtgctggtcttcctgctgtgctttgccacctcctccatctccttc
agcttcatggtcagcacattcttcagcaaagccaacatggcagccgccatagggggcttc
ctctacttcttcacctatatcccatacttcttcgttgctccccgatacaactggatgact
ctcagccaaaagctgctctcctgtctcctgtccaacgttgccatggcaatgggagcccag
ctcatagggaaatttgaagcgaaaggcgtgggtgtccagtggcgagacctcctgagtccc
gtcaatgtggatgacaacttctcctttgggcaagtgctggggatgctgctgctggactcc
gtcctctacggcctggtgacctggtatgtggaggcggtgctcccaggggagttcggcgtg
ccccagccctggtacttcttcatcatgccctcgtactggtgtgggcacccgcagacggtt
ttgggaaaagaagaggaagatgatgacccagagaaggtgctcagaaccgagtactttgag
gcggagccggaggacctggtagctgggatcaagatcaagcatgtgaccaaggtgttcaga
gtggggaacaagggcaaggtggccgtcagagacttgaacctgaacctgtatgaggggcag
atcacggtgcttctgggccacaacggcgcagggaagaccaccactctctccatgctcaca
ggtctctttcccccgaccagcggacgggcgtatatcaacgggtatgagatttcacaggac
atggtccagatccgcaagagcctgggcctgtgcccgcagcatgatgtgctgtttgacaac
ctgacggtcgcagaacacctgcgcttttacgcacagctgaagggcttgtcccgtcggaag
tgccccgaggaagtccagcggatgctgcacgtgctcggcctggaggacaagcaggacacc
ctgagccggttcctgagcgggggcatgaggcgcaagctctccatcgggatcgccctcata
gcgggctccaaggtgctgatgctggacgagcccacctcgggcatggacgccctctccagg
agggccatctgggacctcctgcagcagcacaagagcgaccgcaccatgctgctgaccacg
cacttcatggacgaggctgacctgctgggggaccgcgtggccatcatggccaagggggag
ctacagtgctgcgggtcctcgatgtttctcaagcggaagtacggtgcaggctaccacatg
acgctggtgaaggagcctcactgcgaccccgaggccatctcccggctggtgcagcaccac
gtccccactgccacgctggagagcagagctggcgcagagctgtcctttgtgctccccaag
gagagcacacacaggtttgaaggtctgttctcgaagctggagaagcagcggaaggagctg
ggggttgccagctttggggcctccgtcaccaccatggaagaggtcttccttcgggtcggc
aagctggtggacagcagcatggacatccaggccatccagctccctgccttgcagtaccag
catgagaggcgggcgagtgactgggccgtggacagccacctgtgtggggccatggacccg
accaatggcgtaggctccctgatcgaggacgagtgcaccaccgccaagctcaacactggg
ctcgccctccactgccagcagttctgggccatgttcctgaagaaggccgcatacagcctg
cgcgagtggaagatggtggtggcccaggtcctggtcccgctgacgtgcgtcaccctggcc
ctcctggccgtcaactactcctctgagaccttcgacgaccccaagctggagctgaccctg
ggtgcctacggccgcaccgtcgtgcccttcgctgtcccaggggcctcccggctggatcag
cagctggccgagcgtctgaagggcatgctgcaggcttcgggccaggagccgcgggaggtg
ctgggtgatctggaggagttcctgattttcagggcctcggtggagggaggcggcttcaat
gagcggtgcctggtggcagtgtccttcagagacgtgggtgagtggacggtggtcacggcc
ctgttcaacaaccaggcctaccattcccccgccaccgcgctggccatcgtggacaacctt
ctgttcaagcagctgtgtggccccttggcctccatcgtggtctccaactacccccagccc
cggaacaccctgcaggccgccaaggaccagttcaacgagggccggaagggattcgacatc
gccctcaatctgctgttcgccatggcgttcctggccagcacgttctccatcctggcggtc
agcgagagggccgtgcaggccaagcatgtccagttcgtgagcggagtgcgtgtggccact
ttctggctctccgcgctgctgtgggacctcatgtccttcctggttcccagtctgctgctg
ctggtggtgttcaaagcctttgatgtgcacgccttcacacgcgatggccacatggcggac
gccttgctgctgctcatgctatacggctgggccatcatccccctcatgtacctgatgaac
ttctgcttctcggggcccgctgcagcctataccaggctcaccatattcaacatcctgtcg
ggcgtcgccaccttcctcatggtcaccatcatgcgcatcccagcggtcaagctagaagag
ctttccagaaccctggaccatgtgttcctggtactgcccaaccactgtctggggatggcg
gtcagcagcttccacgagaacttcgagacgaggcggtactgcacatcctccgaggtcgcg
gcccactactgcaagaaatacaacatccagtaccagcagaacttctacgcgtggagtgcc
ccgggggtcggcaggttcgtgacctccatggcagcttctggatttgcctacctcagcctg
ctcttcctcatcgagaccgacacgctgtggaggctcaagacctgcctgtgtgccttccgg
aggaggcgggcactgatggaagctcggacgtcagcacctcctgaggaccaggacgtggtg
gaggaaaggaaccgggtcctggctcccagcatggactccttgctggacaccccgctggtt
atcaaagagctgtccaaggtatatgagcagcgggcgcccctgcttgctgtggacaagatc
tccctcgcagtccagaaaggggagtgtttcggcttgctgggtttcaatggagctgggaaa
accacgactttcaaaatgctgacaggagaggagactatcacatctggggatgcctttgtt
gggggctatagcatcagctctgaaatcgggaaggtgcggcagcggataggctactgcccc
caatttgacgccctgctggaccacatgacaggccgggagacgctggtcatgtatgcccgg
ctccggggcatccctgagcgccacgtcgccgcctgcgtggagaacgcgctccgcggcctg
cttctggagccgcacgccgacaagctggtcaggacgtacagcggcggcaacaagcggaag
ctgagcacggccattgccctgcttggagagccttcggtcatcttcctggacgagccatcc
accggcatggatcccgtggcccggcgtctgctctgggacaccgtggcccgggcccgtgag
tccggcaaggccatcgtcatcacctcccacagcatggaggaatgcgaggccttgtgcacc
cggctggccatcatggtgcagggtcagttcaagtgcctgggcagcccccagcacctcaag
agcaagttcggcagcggctattccctgcaggccaaggtgcggggcgacgggcagcaggag
gcgctggaggagttcaaggcgttcgtgaccctgaccttcccaggcagtgtcctggaagac
gagcaccaagggatggtccattaccacctgcccggggatgacctcagctgggccaaggtg
ttcggtgtcctggagaaggccaaagagaagtacgctgtggacgactactccgtgagccag
atctccctggagcaggtcttcctgagctttgcctacctgcagccgcccgctgaggatgag
gggccctga
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integrated database retrieval system
