Mustela nigripes (black-footed ferret): 132027380
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Entry
132027380 CDS
T09425
Symbol
SEMA6A
Name
(RefSeq) semaphorin-6A isoform X1
KO
K06842
semaphorin 6
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
132027380 (SEMA6A)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
DUF3481
Motif
Other DBs
NCBI-GeneID:
132027380
NCBI-ProteinID:
XP_059272066
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Position
12:143084706..143213271
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AA seq
1048 aa
AA seq
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MRSEALLLYFTLLHFAGAGFPEDSEPISISHGNYTKQYPVFVGHKPGRNTTQRHRLDIQM
IMTMNRTLYVAARDHIYTVDMDTSHTEEIYCSKKLTWKSRQADVDTCRMKGKHKDECHNF
IKVLLKKNDDTLFVCGTNAFNPSCRNYKMDTLEPSGDEFSGMARCPYDAKHANVALFADG
KLYSATVTDFLAIDAVIYRSLGDSPTLRTVKHDSKWLKEPYFVQAVDYGDYIYFFFREIA
VEYNTMGKVVFPRVAQVCKNDMGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNILQAVT
DVIRINGRDVVLATFSTPYNSIPGSAVCAYDMLDIANVFTGRFKEQKSPDSTWTPVPDER
VPKPRPGCCAGSSSLEKYTTSNEFPDDTLNFIKTHPLMDEAVPSVINRPWFLRTMVRYRL
TKIAVDTAAGPYQNHTVVFLGSEKGIILKFLARVGNSGFLNDSLFLEEMSVYNPEKCSYD
GVEDKRIMGMQLDKASSSLYVAFSTCVIKLPLGRCERHGKCKKTCIASRDPYCGWVKEGG
ACAHLSPSSRLTFEQDIERGSTEGLGDCHNSFVALNDISTPLPDHEMSYNTVYGHSSSLL
PSTTTSDTAAQEGYESRAGMLDWKDLLHSPDSTDSLGAVSSRNHQDKKGVIRESYLKGHD
QLVPVTLLAIAVILAFVMGAVFSGIIVYCVCDHRRKDVSSVQRKEKELTHSRRGSMSSVT
KLSGLFGDTQSKDPKPEAILTPLMHNGKLATPGNTAKMLIKADQHHLDLAALPTPESTPT
LQQKRKPSRGSREWERNQNLINACTKDMPPMGSPVIPTDLPLRASPSHIPSVVVLPITQQ
GYQHEYVDQPKMSEVAQMALEDQAATLEYKTIKEHLSSKSPNHGVNLVDNLDSLPPKVPQ
REASLGPPGASLSQNGLSKRLEMHHSSSYGLDYKRSYPTTNSLTRSHQATTLKRNNTNCS
NSSHLSRNQSFGRGDNPPPAPQRVDSIQVHGAQPSGQAVTVSRQPSLNAYNSLTRSGLKR
TPSLKPDVPPKPSFAPLSTSMKPNDACT
NT seq
3147 nt
NT seq
+upstream
nt +downstream
nt
atgaggtcagaagccttgctgctatatttcacactgctacacttcgctggggctggcttc
ccagaagattctgagccaatcagtatttcgcatggcaactatacaaaacagtatccggtg
tttgtgggccacaagccaggacggaacaccacacagaggcaccgactggacatccagatg
attatgaccatgaacagaaccctctacgttgctgctagggaccatatttatactgttgat
atggacacctcacacacagaagaaatctattgtagcaaaaaactgacatggaaatctaga
caggctgatgtagacacatgcagaatgaagggaaaacataaggatgagtgtcacaacttt
attaaagttcttctaaagaaaaacgatgatactttgtttgtctgtggaacgaatgccttc
aacccttcctgcagaaactataagatggatactctggaaccttctggagatgaattcagt
ggaatggccagatgcccatatgatgccaaacatgccaacgtcgcactgtttgcagatgga
aagctatactcagccacagtgactgacttccttgccatcgatgcagtcatttaccggagt
cttggagacagcccaaccctacggaccgtcaagcatgattccaaatggttgaaagagccg
tactttgtccaagcagtggattatggagactacatctacttcttcttcagggaaatagct
gtggagtacaacaccatgggaaaggtagtctttccgagagtggctcaggtgtgtaagaat
gacatgggagggtctcagagagtcctggagaaacagtggacgtctttcctgaaggctcgc
ctcaactgctcggttcctggagactctcatttttattttaacatactccaggcggtcacg
gacgtgattcgtatcaatgggcgcgatgtcgtgctggcaaccttctccacaccttataac
agcatcccagggtctgcagtgtgtgcctacgacatgctcgatattgccaatgttttcacg
gggaggttcaaagagcagaagtctccagattccacttggacaccagttcctgatgaacga
gtacccaagcccaggccaggttgctgcgctggctcatcatccttagaaaaatacacaacc
tccaatgagtttcccgatgataccctgaactttatcaaaacccaccccctcatggatgag
gccgtgccttctgtcatcaacaggccgtggttcctgaggacgatggtcagataccgcctg
accaagattgcagtggacactgctgccggcccgtatcagaatcacactgtggttttcctg
ggatcagagaagggaatcatcttgaagttcttggccagggtaggaaacagtggtttccta
aatgacagccttttcctggaggagatgagcgtttataaccctgaaaagtgcagttacgac
ggagtggaggacaagaggatcatgggcatgcagctggacaaagccagcagctctctgtat
gttgcattctccacctgtgtgataaagcttccccttggccggtgtgaacgacacgggaag
tgtaaaaaaacctgcatcgcctccagagacccgtactgcgggtgggtaaaggaaggtggt
gcctgcgcccacctgtcacccagcagcagactgacttttgaacaggacatagaacgtggc
agcacagagggcctgggagactgtcacaattccttcgtggccctgaatgacatttcaact
cctcttccagatcatgaaatgtcttacaacacagtatatgggcactccagttccctcttg
cccagcaccaccacgtcagacacggcggctcaagaggggtatgagtctagggcgggaatg
ctggactggaaggacctgctccattcacccgacagcacagactctttgggggcggtgtct
tcccgtaatcaccaagacaagaagggagtgattcgggaaagttacctcaaaggccatgac
cagctcgtccctgtcaccctcttggccattgcggtcattctggcttttgtcatgggggcc
gtcttctccggcatcatcgtctattgcgtctgcgaccacaggcgcaaggacgtgtcctcc
gtgcagcgcaaggagaaggagctcacccactcgcgccggggctccatgagcagcgtcacc
aagctcagtggcctctttggggacacccagtccaaagacccgaagccggaggccatcctc
acgccactcatgcacaacggcaagctcgccacgcccggaaacactgccaagatgctcatc
aaggctgatcagcaccacttagacctggcggccttgcccaccccagagtccaccccgacg
ctgcagcagaagcggaagcccagccgcggcagccgcgagtgggagaggaaccagaacctc
atcaacgcctgcaccaaggacatgccccccatgggctcccctgtgatccccacggacctg
cccctgcgggcctcccccagccacatccccagcgtggtggtcctgcccatcacgcagcag
ggctaccagcatgagtacgtggaccagcccaaaatgagcgaggtggcccagatggcgctg
gaggaccaggccgccaccctggagtataaaaccatcaaggagcatctcagcagcaagagc
cccaaccacggggtgaacctggtggacaacctggacagcctgccccccaaagtcccccag
cgggaagcctccctgggccctccgggagcctccctgtctcagaacggcctgagcaagcgg
ctggaaatgcaccactcctcctcctacggccttgactataagaggagctaccccaccacg
aactcgctcacgagaagccaccaggccaccactctcaaaagaaacaatactaactgctcc
aattcctcccacctgtccagaaaccagagctttggccggggagacaacccgccccccgcc
ccgcagagggtggactcgatccaggtgcacggcgcgcagccctccggccaggccgtgact
gtttcgcggcagcccagcctcaacgcctacaactcgctgacgaggtcggggctgaagcgc
accccctcgctaaagccggacgtgccccccaaaccctccttcgctcccctttccacatcc
atgaagcccaatgacgcgtgtacataa
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