Mustela nigripes (black-footed ferret): 132027556
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Entry
132027556 CDS
T09425
Name
(RefSeq) protocadherin beta-16-like
KO
K16494
protocadherin beta
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mnp04515
]
132027556
Cell adhesion molecules [BR:
mnp04515
]
Cadherins
Protocadherins
132027556
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Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
VWA_3_C
Motif
Other DBs
NCBI-GeneID:
132027556
NCBI-ProteinID:
XP_059272342
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Position
12:77918414..77936768
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AA seq
920 aa
AA seq
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MEIGWLHFLRQRQVLVFFVLLCMSRVGAELEPYSVAEEMERGSFVANLGKDLGLGLTELS
TRGARIISQGNKEYLQLKVQTGDLVINEKLDREELCGPTEPCLLYFQLLMEKPLEIFQAE
LRVEDINDHSPVFTEREMILKIPENSPLGITFPLSNALDLDVGSNSVQNYIISPNSHFEV
LTRKLSDGRMYPELLLKEELDREEEPEIVLTLTALDGGSPPRYGIAQVRVEVVDSNDNAP
EFGQPIYKVHIPENSPVGSLVVTVSASDLDSGVYGKITYTLFQPSEDISKTLEVNPVTGE
IRLKKQVDFETVVSYEVDIKATDGGGLSGKCTLLLQVVDVNDNPPEVTLSALTSPIPENS
PEIVVAVFSVSDPDSGDNGKTITSIQDDLPFLLKPSVKNFYTLVTERALDREERTEYNIT
ITVTDLGTPRRPESVRYSVAEETEVGSFVANFARDLGLGVEELSSREARVVSDDNEKHLR
LDLRTGDLLLNEKLDREELCGSTEPCVLHFQMVLENPLQFFRAELQVTDINDHSPMFLDK
QILIKISESTSTGTTFLMESAQDLDVGTNSLQNYTISPNSHFYIKIQDSSDGKLYPELVL
DRALDHEEESELSLTLTALDGGSPPRSGTTLVLIKVLDINDNAPQFAQKLYEVQVLEDTP
IGSWIITIFANDLDTGNYGKISYTFLHASEDIRKTFEINPISGEVHLRSCLDFEVIQFYT
IRIQATDGGGLSEECTLLVKVIDINDNPPEVTISSFTKSIPENASETLVALFSVRDQDSG
DNGRMVCSIQDDLPFYLKPTFKNFFTLVSEKALDRETRSEYNITITVFVAVRLCRRRRAA
SASGDGCSVPEGPFPGHLVDVSGAGTLSQSYQYEVCLTGGSATGEFKFLKPIIPSLPVPD
TGRNIEGNENFRNSFGFNIQ
NT seq
2763 nt
NT seq
+upstream
nt +downstream
nt
atggagattggatggttgcattttctgagacaaaggcaagtccttgttttctttgttttg
ctttgtatgtctcgggtgggtgccgagttagagccctattcagtagcggaagaaatggag
agagggtcctttgtggcaaatctaggaaaagatctggggttaggattgacagagctgtcc
acccgcggagctcggatcatttctcaaggcaacaaagagtatttgcagctcaaggttcag
actggggatttggtcataaatgagaaactagatcgagaggagctatgcggtccaactgag
ccttgcttactgtatttccaactgttaatggaaaaacccttagagatatttcaggctgaa
ctgagggtggaagacataaatgaccattctcctgtgttcactgaaagagaaatgattcta
aaaataccggaaaacagtcctttaggaattacattccctctgagtaatgctctggacttg
gatgtaggaagcaacagtgtccaaaactatataatcagccccaactcccattttgaggtt
ctaacccgcaaactcagtgatggcagaatgtaccctgagctgctgttgaaagaagagctg
gacagggaggaagagcctgaaatcgtattaaccttgacagcgctggatggcggctctcca
cctcggtatgggattgcgcaggtgcgcgttgaagtggtggacagcaacgataacgcccct
gagtttgggcagcccatctataaggtgcatattcctgagaacagtcctgtaggctcgctg
gttgtcactgtttctgccagcgatttagacagcggagtctatggaaaaataacctacaca
ctcttccagccttcagaagatattagcaaaactttggaagtaaatcctgtaacaggagaa
attcgactgaaaaaacaagtagattttgagacagttgtatcttatgaagtagacatcaag
gccactgatgggggcggcctttcaggaaaatgcactcttctcctccaggtggtggatgtg
aatgataatcctccagaagtgaccctgtctgcacttacgagccccatcccagagaattca
cccgagattgtagttgctgttttcagtgtttcagatcctgactctggggacaatgggaag
accattacctccatccaggatgaccttccttttcttctaaaaccttcagtcaagaacttt
tacaccttggtaacagagagagcactagacagagaagaaagaaccgaatacaacatcacc
atcaccgtcaccgacctggggacccccaggcgtcctgaatctgtgcgatattctgtggca
gaggaaacagaagttggttcttttgtggccaattttgcaagggatctagggcttggggtg
gaggagctatcatcacgggaggcccgggtagtgtcagatgataacgaaaagcacttacga
cttgatttacggacaggggatttgctcctaaatgagaaactggaccgagaagagctctgt
ggctccaccgagccctgtgtgctgcattttcagatggtattagaaaaccctttacagttc
tttcgggctgaactgcaagttacagacataaatgatcactcccctatgtttctagacaag
caaatacttattaaaatatcagaaagtaccagcactggaaccacattcctaatggagagt
gcccaagatttggatgtaggaaccaacagtcttcaaaactacacaattagccccaattct
catttctacattaaaatccaagatagcagtgatggaaagttatacccagaactggtcctg
gacagagcattagatcatgaggaggagtctgagctctcattaacactcacagcactggat
ggtggatcgccacccaggtctgggacaactttggttctcatcaaggtcctggacatcaat
gacaatgcccctcagtttgctcagaagctctatgaagtgcaagttctggaggacacaccc
attggttcctggattattaccatttttgctaacgatctggatacaggaaattatgggaaa
atatcatacacatttttgcatgcatcagaagatattcgtaaaacatttgaaatcaatcca
atatccggggaagttcatttgagatcatgtctggattttgaagtgatacagttctacact
atacgtattcaggcaacagatggtgggggtctttcagaagaatgtactcttctggttaaa
gtaatagatataaatgataatccaccagaagtgaccatctcatcatttacaaagtcaatt
ccagaaaatgcctccgagactctggttgctctttttagtgtccgagaccaagactctggg
gataacgggaggatggtgtgctccattcaggatgacctccccttttatctgaaaccaacc
ttcaagaactttttcactctagtttcggaaaaagcactggacagagagacaagatccgag
tacaacatcaccatcaccgtgttcgtggcggtgcggctgtgcaggaggaggcgggcggcg
tcggcgtcgggggacggctgctcggtgcccgagggtccgtttccgggccacctggtggac
gtcagcggcgcggggaccctgtcccagagctaccagtatgaggtgtgtctgacgggaggt
tcagcgaccggtgagttcaagttcttgaagccgattatccccagccttccagtccctgac
actggtagaaatatagagggaaatgagaactttaggaacagttttggattcaacattcaa
taa
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