Mustela nigripes (black-footed ferret): 132027895
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Entry
132027895 CDS
T09425
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mnp04515
]
132027895 (PCDHB1)
Cell adhesion molecules [BR:
mnp04515
]
Cadherins
Protocadherins
132027895 (PCDHB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Ly49
Motif
Other DBs
NCBI-GeneID:
132027895
NCBI-ProteinID:
XP_059272595
LinkDB
All DBs
Position
12:77842676..77845132
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AA seq
818 aa
AA seq
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MAVAHRKLLQSRQVGSLLFMLCVSVGSAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGNKLHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRVE
VRVFDINDNAPIFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSRNAYFHL
HTRFRSHGPKYAELVLDKPLDREDQPEVNLTITAVDGGSPPKSGIAHIRVEVLDVNDHVP
QFSRLVYRAQVLENSANGSLVATVSATDLDEGSNKEITYSLAQNPEAVLQTFQVDSHTGE
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDS
PLQTVVALFSIRDRDVRVGGKITCFLREDLPFAVKPTFRNSYSLVTDRGLDREEVSGYNI
TIVAMDTGLPSLFTETVIEVLIADINDNPPVFQEDSYILTVRENNSPAIFIGKVYAEDLD
LGENAQVTYTLLPPQSGDLSVFAYISINSDNGKLYALRTMDYEAIQNFQFVVKATDGGFL
SLSSQVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSADAGFLVTKVVAVDGDSGQN
SWLSYHLLKATDPGLFSVQQQNGEIRTLRQISERDPMIQKLIILVQDHGQPALSTTASLN
ILLVNGFSEPYLQFRDPSKNPTRVNPSTKYLVISLAVLSFLFLLSVTVIFGIHIYQKVKY
REKFTVQEHFYDDCNFPNNLVQRGANGSLSQPCPYEMCSATGTSNSEFRFLKRFMPNFPF
PHGTGETKTEAGSRLPPDSNRNRSQGSEDHGQVPDNSM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgcacagaaaactcctgcagagcaggcaagtagggtctcttctctttatg
ttgtgcgtatctgtggggagtgcggccaccatccgctattcagtggcggaagagatggag
agcggttcgtttgtggctaatgtggctaaggacctggggctggaggtagggaagctggct
gcgcgcggggcgcggctggtttctgaaggcaacaaactgcatttccgtctccaccgtaag
accggggatctgttcgtgaaggagaaactggatagggagtcactgtgtggcaaagctgac
ccgtgcgtcctgcactttgaaatagtcctggtggagccgctgcagtcctttcgggttgag
gtcagggtatttgatatcaatgacaatgccccgattttcctgaacaaggagccgctttta
aagattccggagagcacgcccctgggttcacgttttcctctgcagagcgcccaggatctg
gacgtgggcctcaatggtcttcaaaattacaccttgagccgcaatgcgtatttccacctg
cacacccgctttcgcagtcatgggcccaaatatgctgagctggtcttggataagcccctg
gacagagaggaccagccggaagtcaatttgacaattacggcggtggatggcgggtcccca
cccaagtcgggcatcgcgcacatccgcgtggaggttctggatgtcaatgaccacgtgcct
cagttctctaggctggtgtaccgtgctcaggtactggaaaatagcgccaacggttccttg
gtggccactgtgagtgccacagacctggacgagggctccaacaaggaaatcacttattcc
ttggctcaaaatccagaagcagttctccaaacatttcaggttgactctcacactggagag
gttcgactgagggggcccctagattttgaagcaattgaaacatatgatattgacattcaa
gccaccgatggagggggcctctccgcccacagcaaagtcctggtggaagtggtggatgtt
aatgacaatcctcctgaggtgacagtttcctctgtgtccagccctctccctgaggactcc
ccactacaaactgtagtggcccttttctctattcgagaccgggatgttcgggtgggagga
aaaatcacctgtttcctcagagaagaccttccttttgcggtcaaaccgactttccggaat
tcttactcattggttactgacagaggcttggatcgggaagaggtttcaggctacaacatc
accattgttgccatggatactggactgcccagtctgttcacagaaactgtgattgaggtg
ttaatagctgacattaatgacaatcccccagtatttcaggaagactcctacattttgact
gttcgagaaaacaacagtccagcaatttttattggcaaagtttacgcggaggatctagat
ttgggtgagaatgcccaagtaacatatactctgctgcctccacaaagtggagatttatca
gtctttgcttacatctccataaattcagacaatgggaagctctatgcacttagaaccatg
gattatgaggccattcaaaattttcagtttgtggtaaaggcaactgatgggggcttcctc
tcactgagtagccaggttactgtcagggtggttgttctggatgacaatgacaaccgccca
atgatcttgtacccactgcagaatggcaccttaccctgcaacgacctggtgcccaggtcg
gcggatgcaggcttcctggtgaccaaggtagtggctgtggatggtgactcaggtcagaat
tcttggctttcatatcatctccttaaggccactgaccctgggttattctctgttcaacaa
caaaatggagaaatccgtacattgcggcagatatctgaaagagaccccatgattcagaaa
ctgatcattcttgttcaggatcatggccaaccagctctttccactactgcctcactcaac
atcttgctggtaaatggtttttctgaaccctatctgcaattccgggatccttccaagaat
cctacaagggtaaatccatccactaaatatttggtcatttctctggctgtgctttccttt
ctctttctcctctctgtcacggtgatctttggtatacacatctaccagaaggttaaatac
agagaaaagttcacagttcaagagcatttctatgatgactgtaatttccctaataacctg
gtacaaagaggggctaatggatcattatctcaaccatgtccctatgaaatgtgctcagcc
actggcaccagcaatagtgagtttcggtttcttaaacgctttatgcccaacttccccttc
ccacatggcactggagagacaaaaacagaagctggctcccgtttaccaccagactctaat
aggaataggtctcaggggtcagaggaccatggccaagtacctgacaacagtatgtag
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