Mustela nigripes (black-footed ferret): 132028180
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Entry
132028180 CDS
T09425
Symbol
TRIP13
Name
(RefSeq) pachytene checkpoint protein 2 homolog
KO
K22399
pachytene checkpoint protein 2
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
132028180 (TRIP13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mnp03036
]
132028180 (TRIP13)
Chromosome and associated proteins [BR:
mnp03036
]
Eukaryotic type
Centromeric chromatin formation proteins
SAC (spindle assembly checkpoint) factors
Others
132028180 (TRIP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_lid_TRIP13_C
TRIP13_N
AAA
AAA_22
AAA_16
nSTAND3
AAA_18
AAA_25
Viral_helicase1
AAA_14
AAA_28
AAA_33
AAA_5
NPHP3_N
IstB_IS21
TsaE
RuvB_N
RNA_helicase
NACHT
Cytidylate_kin
AAA_11
ATPase_2
AAA_17
Mg_chelatase
ABC_tran
DUF815
AAA_24
AAA_7
bpMoxR
AAA_30
TIP49
AAA_19
AAA_RNF213_4
nSTAND1
Rad17
PduV-EutP
NRBF2
nSTAND6
SLFN-g3_helicase
NB-ARC
PhoH
AAA_3
Motif
Other DBs
NCBI-GeneID:
132028180
NCBI-ProteinID:
XP_059272797
LinkDB
All DBs
Position
12:516838..533231
Genome browser
AA seq
432 aa
AA seq
DB search
MDEAVGDLKQALPCVAEAPTVHVEVHQRGGSTAKQEDIKQSVRKLLNRHSIVFGDYTWTE
FDEPFLARHVQSVAIVDTELKAKDPQPIDLGACTVALHVFQLNEGGPSSETLEEESENIT
AASHWVLPAAEFHGLWDSLVYDVEVKSHLLDYVTTTLLFSDKNVDSNLIAWNRVVLLHGP
PGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLFSKWFSESGKLVTKMFQKIQDLI
DDKDALVFVLIDEVESLTAARNACRAGTEPSDAIRVVNAVLTQIDRIKRHCNVVILTTSN
ITERIDVAFVDRADIRQYIGPPSAAAIFKIYLSCLEELMKCQIIYPRQQLLTLRELEMIG
FIENNVSKLSLLLSEISRKSEGLSGRVLRKLPFLAHALFVQAPTVTIEGFLQALSLAVDK
QFEERKKLSSCI
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggccgtgggcgacctgaagcaggcgctgccgtgcgtggccgaggcgccgacc
gtgcacgtggaggtgcaccagcgcggcggcagcaccgcgaagcaggaggacataaagcag
agcgtccggaagctgctcaacagacatagcatcgtgttcggggactacacgtggaccgag
ttcgacgagcccttcctggccaggcacgtgcagtccgtggccatcgtcgacacggagttg
aaggcgaaagacccgcagcccatcgatctgggcgcctgcacagtcgcgctgcacgtcttc
cagctgaacgagggcggccccagcagtgagactctggaggaggagtcggagaacatcact
gccgcaagccactgggtcctgcctgcagctgaattccacgggctttgggacagcctggta
tatgatgtggaagtcaaatctcatctcctagattacgtgacgacgactctgctgttctca
gacaagaatgtcgacagtaacctcatcgcctggaaccgggtggtgctgctgcacggccct
ccaggaactgggaagacctccctgtgtaaagccttagcccagaagctgaccatcaggctc
tcgagcaggtaccggtacggccagctgattgaaataaacagccacagtctcttttccaag
tggttctcggaaagcggcaagctggtaaccaagatgttccagaagattcaggacttgatc
gacgacaaggacgctctggtgtttgtgctgattgacgaggtggagagcctcacggctgcc
cgcaacgcctgcagggccggcaccgagccttcggacgccatacgcgtggtcaatgccgtc
ctgacccagattgaccggatcaagaggcactgcaatgtggtgattctgaccacttccaac
atcacggagaggatcgacgtggccttcgtggacagggctgacatcaggcagtacatcgga
cctccctctgcggcagccatcttcaagatctacctctcctgcttggaagagctgatgaag
tgtcagatcatataccctcgccagcagctgctgaccctccgggagctggagatgatcggc
ttcatcgaaaacaacgtgtccaagttgagcctccttttgagtgaaatttcaaggaagagt
gagggtctcagtggccgcgtcctaagaaaactcccttttctggctcacgcactgttcgtc
caggcccccaccgtcaccatcgagggcttcctgcaggccctgtccctggcggtggacaag
cagtttgaagaaaggaagaagctctcgtcttgcatttga
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