KEGG   Mustela nigripes (black-footed ferret): 132028355
Entry
132028355         CDS       T09425                                 
Symbol
GEMIN5
Name
(RefSeq) gem-associated protein 5 isoform X1
  KO
K13133  gem associated protein 5
Organism
mnp  Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mnp03019]
    132028355 (GEMIN5)
   03041 Spliceosome [BR:mnp03041]
    132028355 (GEMIN5)
Messenger RNA biogenesis [BR:mnp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     132028355 (GEMIN5)
   mRNA cycle factors
    P-body specific factors
     132028355 (GEMIN5)
Spliceosome [BR:mnp03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   SMN complex factors
    132028355 (GEMIN5)
SSDB
Motif
Pfam: GEMI5_RBS TPR_GEMI5 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_1st Beta-prop_RIG_2nd Beta-prop_WDR5 WD40_Prp19 Beta-prop_EML_2 WD40 WD40_WDHD1_1st ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR3_2nd WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 EIF3I Beta-prop_EML Beta-prop_TEP1_2nd Beta-prop_IFT140_1st Beta-prop_RIG_1st Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_WDR75_1st WDR90_beta-prop_4th WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR41 WD40_MABP1-WDR62_1st MIOS_WD40 NBCH_WD40 Beta-prop_IFT122_1st Beta-prop_WDR11_2nd
Other DBs
NCBI-GeneID: 132028355
NCBI-ProteinID: XP_059273213
LinkDB
Position
12:complement(45566112..45609257)
AA seq 1509 aa
MGQDPRTLPPSPNWYCARCSDAVPGGLFGFAARTSVFLVRVGPSAGAIPGTPPFRVIGEL
VGHTERVSGFTFSHHPGQYNLCATSSDDGTVKIWDVETKAVVTEHALHQHTISALHWSPQ
VKDLIVSGDEKGVVFCYWLNRNDSQHHFIEPRTIFCLTCSPHHEDLVAIGYKDGIVVIID
ISKKGEVIHRLRGHDDEIHSIAWCPLPGEDCLSINQEENSEEPEIPNGKVIEQTPVTKGC
YLATGSKDQTIRIWSCSRGRGVMILKLPFLKRRGGGIDPTVKERLWLTLHWPKDQPTQLV
SSCFGGELLLWDLTQSWRRKYTLFSASSEGQNHSRIVFNLCPLQTEDDKQLLLSTSMDRD
VKCWDMATLECCWTLPSLGGFAYKLAFSPVDMGCLAIGVGDGMIRVWNTLSIKNNYDVKN
FWQGVKSKVTALCWHPAKEGCLAFGTDDGKVGLYDTYSNKPPQISSTYHKKTVYTLAWGP
PLPPISLGGEGDRPSLTLYSCGGEGIVLQHNPWKLGGEAYDINKLIRDTNSIKYKLPVHT
EISWKADGKIMALGNEDGSIEIFQVPNLKLICTIQQHHKLVNTISWHHEHGSQPELSYLM
ASGSNNAIIYVHNLKTVIESNPETPVTITEPYRTLSGHTAKITSVAWSPHHDGRLVSASY
DGTAQVWDTLREEPLCNFRGHRGRLLCVAWSPLDPDCIYSGADDFCVYKWLTSMQEHSRP
PQGKKSIELEKKRLSQPKPKPKKKKKPTSRAPVKQEVYDGNEDESIRESSGPVENGVSDQ
EGEEEAREPEFPSGVASVASREPVTCTPVSLGFEKSKVTVNNKVTLLKKEPPKEKPESLT
KKRKARSMLPLTTSLDHRSKEELHQDCLVLATAKHSKAELNKEVSADLEERFHLGLFTDR
GALYRMIEVEGKGHLENGHPELFHQLMLWKGDLKGVLQTAAERGELTDSLVAMAPVAGYH
VWLWAVEAFAKQLCFQDQYVKAASHLLSIHKVYEAVELLKSNHFYREAIAVAKARLRPED
PILKDLYLTWGAILEKDGHYAVAAKCYLGAACAYNAAKVLSKKGDAASLKTAAELASIVG
ENELSSSLALRCAQELLLARNWVGAQEALKLHESLKGQRLVFCLLELLSKHLEERQLLEA
KSSSYNTWATGTAGPFVERVTAIWKSTFSLESPEQYQAALQQLQSIKYPSATNNTPSKQL
LLHICHDLTLAVLSQQVASWDAAVEALLRAVVRSYDSGNFTIMQEVHSAFLPEGCDHLKH
KLGEPQSLITPAFKSLEAFFIYGHLYEFWWSLSRHCPKSSVWVRAAHRRTASVEQSQQIN
NATPEETDSGDSQPEPNRPPELDVRLTEESKQMLITCKELFSEKHASLQNSQRTVAEVQE
TLAEMIRQHQKSQVCKSTTNGPDKNESEQAAEQSLSSPQNECKEEKNQPLSLPELTKRLT
EANEKIAKFPESVKIWPFPDVLECCLILLHIGSQCPGSVTQDMQQQAQELLQKYGNTKVY
KRYCETFCT
NT seq 4530 nt   +upstreamnt  +downstreamnt
atgggacaggatccgcgcacgctgccgccctctcctaactggtactgcgcccgatgcagc
gatgccgtgcccgggggcctcttcggcttcgcagcgcggacctctgtctttcttgtccgc
gtgggcccgagcgccggcgcgatccctgggacgcccccatttcgagtcataggggagttg
gtgggacacaccgaaagggtttctggcttcacattttctcatcacccgggtcagtacaac
ctctgtgccaccagctctgatgatggaactgtgaaaatctgggatgtagagacaaaagca
gttgtgacagaacacgcactccatcagcatacaatatcagcattgcattggtctcctcaa
gtgaaggatttaatagtatctggagatgaaaagggagtagttttctgttactggcttaac
agaaatgacagccagcaccactttatagaacccaggacaattttctgtcttacttgctca
cctcatcatgaagatttagtagccattggctacaaggatggcatagtggttataattgac
atcagtaagaaaggagaagttattcacaggcttcgaggccatgatgatgagatccactcc
atagcctggtgtcccctgcctggtgaagactgtttatccataaatcaggaggaaaattca
gaagaacctgaaattcccaacggtaaagttatagaacaaactccagtaacaaaaggctgc
tacttagccactggaagcaaagatcagaccattcgaatctggagctgctctagaggccga
ggggtgatgattttgaaattgccctttctgaagagaagaggagggggtatagacccgact
gttaaagaacgcctttggttgacactccactggcctaaggaccaaccaacacagctggta
tccagctgttttggaggcgagttgttactgtgggatctcactcagtcttggagacggaaa
tataccctctttagtgcttcatcagaagggcagaatcattcaagaattgtatttaactta
tgccctttacaaactgaggatgacaaacagctgctgctttctacatcaatggacagagac
gtaaaatgttgggacatggccacccttgagtgctgctggaccctaccttccctcggtggg
tttgcctataaactagctttctctcctgtggacatgggctgtttggccataggcgttggg
gatggcatgatccgtgtatggaatacactgtccatcaagaacaactacgatgtgaaaaat
ttttggcagggtgtcaagtccaaggttaccgcgctgtgctggcacccagccaaggaaggc
tgcttagcttttgggactgatgacgggaaagtgggattgtatgacacctactccaacaaa
cctccacagatttctagcacatatcataagaagactgtgtacactttagcctgggggcca
ccactaccccccatttcgctcggaggagaaggagacagaccttccctcactttatacagc
tgtggaggggaagggattgtcttacagcataacccctggaagcttggtggagaggcctat
gatatcaacaaactcatcagggacaccaattcaatcaaatacaaattgcctgtacacaca
gagatcagctggaaagcagatggcaaaatcatggctcttggcaatgaagacggatcaata
gaaatatttcaggttccgaacctgaaactgatatgcaccatccagcagcatcacaagctt
gtgaacaccatcagctggcatcatgagcatggcagtcagccggagctgagctacctgatg
gcctctgggtccaacaatgccatcatttatgtgcacaacctaaagactgtcatagagagc
aatcctgaaactccagtaaccattacagagccctaccggacgctgtcagggcacacagcc
aagattaccagtgtggcgtggagcccacatcatgatggaaggctggtatctgcttcctac
gatggtacagctcaggtgtgggatactctccgagaagagcctctttgcaatttccgagga
catcgaggtcgactgctttgtgtggcgtggtccccactggacccagactgcatctactca
ggggcagatgacttctgtgtgtacaaatggcttacttccatgcaagaacattcccggcct
cctcaaggtaagaaaagtattgaattagagaaaaagaggctctctcaacctaagccaaag
cccaaaaagaagaaaaagcctacctcgagagcccccgtaaagcaggaagtatacgacgga
aatgaagacgagagcatcagagagagctcaggacctgttgagaatggcgtgtcagaccag
gagggtgaagaggaagcccgggagccagagttccccagtggtgttgcctcagtggcttct
agagaaccagttacctgcaccccggtttcattaggctttgaaaagtcaaaggtcactgtt
aataacaaagtcactttactgaagaaggagccacctaaagagaagccagaatccttaacc
aagaagcgaaaagctcgttccatgcttccactgactaccagcctggaccacaggtccaag
gaggagcttcatcaggactgtttggtattagcaactgcaaaacactccaaagcagagcta
aataaggaggtgtctgctgatcttgaggaaagatttcacctggggcttttcacagaccgg
ggggccctgtacagaatgattgaagtcgaaggaaaaggtcacttggaaaatggccacccc
gagttatttcaccagctaatgctttggaaaggagatctaaaaggtgttcttcagactgca
gcagaaagaggggagctgacagacagtcttgtggctatggcgccagttgccggctaccat
gtgtggctgtgggccgtggaagcttttgccaaacagctgtgttttcaagatcaatatgtc
aaggctgcctctcacctactttctatccacaaagtatatgaagctgtagagctgctcaag
tcaaatcatttctacagggaagctattgcagttgccaaggcccgactgcgcccagaagac
ccgatcctaaaggacctgtacctcacctggggagccatcctggaaaaagatggccattat
gctgtagccgccaaatgctatttaggggctgcttgtgcttacaacgcagccaaagttttg
tccaagaagggggacgcagcatcacttaagacggctgcggagttggcttcaattgtagga
gagaatgagttgtcctcttccctggctctccgctgtgcccaggagctgcttttggccagg
aactgggtgggagcccaggaagccctgaagctacatgaaagtctaaagggacaaagactg
gtgttttgccttcttgagctactgtccaagcacctggaggaaaggcagcttttagaggcc
aaaagctcttcctacaacacctgggctacaggcactgcagggccctttgtggagagggtg
accgctatatggaagagcaccttcagcctggagagcccagagcagtaccaggcagccctg
cagcaactgcagagtatcaagtacccatcggctacaaataacactccctccaaacagctt
ctgcttcacatttgccatgacctgacgttggcagtgctgagccagcaagtggcctcctgg
gacgcagctgtggaagccctgcttcgggctgtggtccggagctacgactcgggaaacttc
accatcatgcaggaagtgcactcagcctttcttcctgagggctgtgaccatctaaagcac
aaactgggtgaacctcagtccctcatcacaccagctttcaaaagtttggaggcctttttt
atttatggacatctgtatgaattttggtggtctctctccaggcattgccccaaatccagt
gtttgggtaagagctgctcacagaaggacagcctctgttgagcaaagccagcagataaac
aatgccacccctgaagaaacggactccggagattctcagccagagccaaacaggcctcca
gaattagatgtgagactcacagaagaaagcaagcaaatgctaatcacttgtaaagagctc
ttttcagaaaagcacgccagtctccaaaactcacagagaaccgttgctgaagtccaagag
accttggcagaaatgatccgccaacaccagaagagtcaagtctgtaaatctacaacaaac
ggtcctgataagaatgaatctgagcaggcagcagaacagtccctttctagtcctcagaat
gagtgtaaagaagaaaaaaatcagccactttctctgcctgaattaaccaaaaggcttaca
gaggcaaatgagaaaatagctaaatttcctgagagtgttaagatctggcccttccccgat
gtgctggagtgctgccttatcctgcttcacattgggtcccagtgtcctggcagcgtgacc
caagacatgcagcaacaggcccaagaactccttcagaaatacggcaacactaaagtttac
aaaagatactgcgagaccttctgcacgtga

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