Mustela nigripes (black-footed ferret): 132028362
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Entry
132028362 CDS
T09425
Symbol
SOX30
Name
(RefSeq) transcription factor SOX-30 isoform X1
KO
K09271
transcription factor SOX15/30
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mnp03000
]
132028362 (SOX30)
Transcription factors [BR:
mnp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
132028362 (SOX30)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
132028362
NCBI-ProteinID:
XP_059273232
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Position
12:complement(47943666..47978073)
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AA seq
768 aa
AA seq
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MERARPEPQPQPRQLPRATPPRPLRPAPPQLPVEGASFRAAAAELPPSPPTPCAAAIATV
ASSCGEAQASGVQPAARRLLQVKPEQVLLLPPGPPLAQARDEGVVASPAQARLLQLRPEL
LLLPPPPPASDGAPCRPELHPLQSRALHVKAEKQEQGPDLDPSAGTRRPVEAGPRASRTA
KVEGPGPALDGHGGDEKKGKLEAEEVMRDVVKGGEGKTLATIREGVIKTEEPERLREDCR
LGAEPASNGLVHGNKEVILAQPSSAFGPHQQDLRIPLTLHTVPPGARIQFQGPPPSELIR
LTKVPLTPVPIKMQSLLEPSVKIETKDVPLTVLPSDAGIPDTPFSKDRNGHVKRPMNAFM
VWARIHRPALAKANPAANNAEISVQLGLEWNKLSEEQKKPYYDEAQKIKEKHREEFPGWV
YQPRPGKRKRFPLSVSNVFSGTTQNIISTNPTTIYPYRSPTYSVVIPSLQNTITHPVGDA
PPAIQLPTPAVQRPSPISLFQPSVSSTAQVGIQAPSLPLRPALPPQRFAGPSQTDTHRLH
SGASRSVKRPTPVSLENTNRIPTSASTAHARFATSTIQPPKEYPSVSTCPRSAPIPQAPP
IPHSHVYQAPPLGHPATLFGTPPRFSFHHPYFLPGPHYFPSSTCPYSRPPFGYGNFPSSM
PECLGYYEDRYQKHEAMFSALNRDYPFRDYPDERTHSEDSRSCESMDGTSYYNSHSHSGE
EYLNPMPQLDIGALENVFTAPTSTPSSIQQVNVTDSDEEEEEKVLRNL
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atggagagagccaggccggagccgcaacctcagccgcgccaactgccgcgggcgaccccg
ccgcgcccgctccgccctgctcccccacagctgccggtcgagggcgcctcctttagggct
gcggccgcggagcttcccccgtcgccgcccaccccgtgcgcggccgccattgcgaccgtg
gcctcgtcgtgcggcgaggctcaggcgtcgggtgtacagcccgcggcgcggcggctgctg
caggtgaagccggagcaggtgttgctgctgccgccagggccaccgctggctcaggcccgg
gacgaaggcgtcgtcgcctcaccggcgcaagcacggctgctgcagctgaggcccgagctg
ctgctgctgccgccgcctccgcccgcgtccgacggcgccccctgccgaccggagctgcac
ccgctgcagtcccgagcgctgcacgtcaaggccgagaagcaggagcaggggcccgacttg
gatccgtcggcggggacgcgaaggcctgtggaggcaggccctagggcctccaggacggcc
aaggtagaaggcccggggccagctctcgacggccacggaggggacgagaaaaagggcaag
ctggaagcggaggaggtcatgagggacgtggtgaaaggcggggagggcaaaaccctggcg
accatcagagaaggagtcatcaaaacagaggagcccgagagactccgcgaggactgcagg
ctgggcgcggagcccgcgtccaatggcctggtccacggcaacaaagaagtcatcctagcc
cagccatccagtgcctttgggccacaccagcaagacctcaggatccctttgactctccac
acggtcccccctggggcccggatccaatttcagggacctccgccttcagagctgatacgg
ttgaccaaggtccccttgacaccggtgcctattaaaatgcaatccttactggaaccttct
gtaaaaattgaaaccaaagatgtcccgctcaccgtgcttccctcagatgcaggaatacca
gatactcccttcagtaaggacagaaatggtcatgtgaagcgacccatgaatgcatttatg
gtttgggcaaggattcaccggccagcactagctaaagctaacccagcagccaacaatgca
gaaatcagtgtccagcttgggttagagtggaacaaacttagtgaagaacaaaagaaacct
tattatgatgaagcacaaaagattaaagaaaagcacagagaggaatttcctggttgggtt
tatcaacctcgtccagggaagcgaaaacgcttccctctaagtgtttccaatgtattttct
ggtaccacacagaatatcatctctacaaatcctacaacaatatatccttatcgctcacct
acctactctgtggtaattcccagcctacagaacaccatcactcatccagttggtgacgcc
ccacctgccatccaactgcccacacctgcggtccagcgcccaagccccatctcacttttc
cagcccagcgtctccagtactgcccaggtgggcatccaggctccaagcctgcccctccgt
ccagcactcccaccccagcgctttgcggggccctcccaaacagacactcatcggctgcac
tccggagccagtcgctccgtgaagagacctactcccgtctctctggagaacaccaacagg
attccaactagtgcaagtactgcccatgccagatttgcgacctcaaccatccaacctccc
aaggagtatcccagcgtttccacttgtcccagaagtgctccaatcccccaggctcctcct
attccacactcacatgtctaccaagctcctccccttggccatccggccacgttgtttggg
acaccaccacgattttcttttcatcacccttacttcctacctggacctcactacttccca
tcaagcacctgcccttatagtcggcctccctttggctatggaaattttccaagttcaatg
ccagaatgccttggttattatgaagacaggtaccaaaaacacgaggctatgttttcagct
ttaaatagagactatccttttagagactatccagatgaacgcacacacagtgaagattct
cggagttgtgagagcatggatgggacctcttactataacagtcatagccacagtggggaa
gaatacttaaatcccatgcctcagctggacattggagccttggagaatgtcttcacagcc
ccaacatcaactccctctagcatccagcaagtcaatgtcactgacagtgatgaggaggaa
gaagaaaaagtgctcaggaatttataa
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