Mustela nigripes (black-footed ferret): 132028402
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Entry
132028402 CDS
T09425
Symbol
SLIT3
Name
(RefSeq) slit homolog 3 protein isoform X1
KO
K06850
slit 3
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp04360
Axon guidance
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
132028402 (SLIT3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mnp00536
]
132028402 (SLIT3)
Glycosaminoglycan binding proteins [BR:
mnp00536
]
Heparan sulfate / Heparin
Axon guidance molecules
132028402 (SLIT3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
EGF
LRR_5
hEGF
Laminin_G_2
LRR_9
LRRNT
Laminin_G_1
LRRCT
EGF_TEN
LRR_14
LRR_EndoS
EGF_3
EGF_Teneurin
LRR_NXF1-5
EGF_DL_JAG
cEGF
Motif
Other DBs
NCBI-GeneID:
132028402
NCBI-ProteinID:
XP_059273306
LinkDB
All DBs
Position
12:complement(57863718..58452755)
Genome browser
AA seq
1522 aa
AA seq
DB search
MAPGRTGAGAAVRARLALALALASVLSGPPAAACPTKCTCSAASVDCHGLGLRGVPRGIP
RNAERLDLDRNNITRITKMDFAGLKNLRVLHLEDNQVSVIERGAFQDLKQLERLRLNKNK
LQVLPELLFQSTPKLTRLDLSENQILGIPRKAFRGIANVKNLQLDNNHISCIEDGAFRAL
RDLEILTLNNNNISRILVTSFNHMPKIRTLRLHSNHLYCDCHLAWLSDWLRQRRTVGQFT
LCMAPVHLRGFNVADVQKKEYVCPGPHSEPPSCNANSISCPSACTCSNNIVDCRGKGLTE
IPANLPEGIVEIRLEQNSIRSIPAGAFTQYKKLKRIDISKNQISDIAPDAFQGLKSLTSL
VLYGNKITELAKGLFDGLVSLQLLLLNANKINCLRVNTFQDLQNLNLLSLYDNKLQTISK
GLFAPLQAIQTLHLAQNPFVCDCHLKWLADYLQDNPIETSGARCSSPRRLANKRIGQIKS
KKFRCSGSEDYRSRFSSECFMDLVCPEKCRCEGTIVDCSNQKLARIPSHLPEYVTDLRLN
DNEISVLEATGIFRKLPNLRKINLSNNKIKEVREGAFDGAAGVQELMLTGNQLETLHGRM
FQGLSSLKTLMLRSNLINCVSNDTFAGLSSVRLLSLYDNRITTITPGAFTTLVSLSTINL
LSNPFNCNCHLAWLGKWLRKRRVVSGNPRCQKPFFLKEIPIQDVAIQDFTCEGNDESSCQ
LGPHCPEQCACVETVVRCSNRGLHALPKGIPKDVTELYLEGNHLTAVPRELSAFRHLTLI
DLSNNSIGVLTNYTFSNLSHLSTLILSYNRLRCLPIHAFDGLRSLRVLTLHGNDISSVPE
GSFRDLTSLSHLALGTNPLHCDCSLRWLSEWVKAGYKEPGIARCSSPEPMADRLLLTTPT
HRFQCKGPVDINIAAKCNACLSSPCKNNGTCSQDPVELYRCTCPYGYKGKDCTVPINTCI
QNPCRHGGTCHLSDSHKDGFSCSCPLGFEGQRCEINPDDCEDNDCENNATCVDGINNYVC
VCPPNYTGELCDEVIDHCVPGMNLCQHEAKCISLDKGFRCECLPGYSGKLCEVDNDDCVA
HRCRHGAQCVDAVNGYTCICPQGFSGLLCEQPPPMVLLQTSPCDQYECQNGAQCIVVQQE
PTCRCPPGFAGPRCEKLITVNFVGKDSYVELASAKVRPQANISLQVATDKDNGILLYKGD
NDPLALELYQGHVRLVYDSLSSPPTTVYSVETVNDGQFHSVELVMLNQTLNLVVDKGAPK
SLGKLQKQPAVGINSPLYLGGIPTSTGLSALRQGTDRPLGGFHGCIHEVRINNELQDFKA
LPPQALGVSPGCKSCTVCKHGLCRSVEKDSVVCECHPGWTGPLCDHEVRDPCLGHSCNRG
KCVPAGTSYVCKCAEGYSGATCDHKNDSNACSAFKCHQGQCHFSDRGEPFCLCQPGFSGE
HCEQENPCLGEVVREVIRRQKGYASCATASKVPIMECRGGCGPQCCQPTRSKRRKYVFQC
TDGSSFVEEVERHLECGCRPCS
NT seq
4569 nt
NT seq
+upstream
nt +downstream
nt
atggcccccgggcggacaggggccggcgccgccgtgcgcgcccgcctggcgctggccttg
gcgctggcgagcgtcctgagcgggcccccagccgccgcctgccccaccaagtgtacctgc
tccgccgccagcgtggactgccacgggctgggcctccggggggttccccggggcataccc
cgcaacgccgaacgccttgacctggacagaaataacattaccaggatcaccaagatggac
ttcgctgggctcaagaacctccgggtcttgcatctggaagacaaccaggtcagcgtcatc
gagagaggcgccttccaggatttgaagcagctggagcgattgcgcctgaacaagaataag
ctccaggtcctcccggaattgctttttcagagtacaccgaagctcaccagactagatctg
agcgaaaaccagatcctggggatcccgaggaaggcgttccggggcatcgccaacgtgaag
aacttgcaactggacaacaaccacatcagctgcattgaagatggagccttccgggcgctg
cgcgatctggagatcctcaccctcaacaacaacaacatcagccgcatcctcgtcaccagc
ttcaaccacatgccgaagattcgaactctgcgcctccactccaaccacctgtactgtgac
tgccacctggcctggctctcggattggctgcgacagcggcggacagttggccagttcaca
ctctgcatggctcctgtgcacctgaggggcttcaacgtggcagatgtgcagaagaaggag
tacgtgtgtccaggcccgcactcagaacctccatcctgcaatgccaactccatctcctgc
ccctcggcctgcacttgcagtaataacatcgtggactgtcgagggaagggcttgactgag
atccccgccaacttgccagagggcatcgtcgaaatacgcctggaacagaactccatcaga
tccatccccgctggagccttcacccagtacaagaagctgaagcgaatagacatcagcaag
aatcagatatcggacattgctccggatgccttccagggtctgaaatcactcacatcgctg
gtactctatgggaacaagatcacggagcttgccaagggactctttgatggactggtatcc
ctacagctgctcctcctcaatgccaacaagatcaactgtctgcgcgtgaacacatttcag
gacctgcagaacctcaacctgctctccctctatgacaacaagctgcagaccatcagcaag
ggactctttgcccctctgcaggccatccagaccctccacttggcccaaaacccgtttgtg
tgtgactgccacctgaagtggctggctgactacctgcaggacaaccccatcgagacgagc
ggggcccgctgcagcagcccgcgccggctggccaacaagcgcatcggccagatcaagagc
aagaagttccgctgctcaggctcagaggattaccgcagcaggttcagcagtgagtgcttc
atggacctcgtgtgccccgagaagtgccgctgcgagggtaccatcgtggactgctccaac
cagaagctggcccgcatcccaagccacctccccgaatacgtcaccgatctgcgactgaac
gacaatgagatatccgttctcgaggccactggtatcttcaggaagctgcccaacctgcgg
aaaataaacctgagtaacaataagatcaaagaggtgagagagggtgccttcgatggagcg
gccggtgtgcaggaactgatgctgaccgggaaccagctggaaacgctacacggacgcatg
ttccagggactcagcagcctcaagactctgatgctgaggagtaacctgatcaactgtgtg
agcaatgacacgtttgctggcctgagttcagtgaggctgctgtccctctatgacaatcgg
atcaccaccatcacccctggcgccttcaccacccttgtctccctgtctaccataaacctc
ctgtccaaccctttcaactgcaactgccacctggcctggcttggcaaatggttgaggaag
cggcgggtcgtgagcgggaacccccggtgccaaaagccattcttcctcaaggagatcccc
atccaggatgtggccatccaggactttacctgtgaaggcaatgacgagagcagctgccag
ctgggcccacactgcccggagcagtgcgcctgcgtggagacagtggttcgctgcagcaac
aggggactgcacgccctccccaaaggcattcccaaagacgtgaccgaactgtacctggaa
ggaaaccacttaacagccgtgcccagggagctgtctgccttccgacacctgacacttatt
gacctgagcaacaacagcatcggcgtgctgaccaactacacgttcagtaacctgtctcac
ctctccacgctgatcctaagctacaaccggctgcggtgcctccccatccacgccttcgac
gggctgcggtctctccgggtgctgactctccacggcaatgacatttccagtgttcctgaa
ggctccttccgcgacctgacgtctctttcccatctggcgctgggaaccaatccactccac
tgtgactgcagtctgcgctggctctcagagtgggtgaaggcggggtacaaggagcccggc
atcgcccgctgcagtagccccgagcccatggccgacaggctcctgctcaccacccccacc
caccggttccagtgcaaagggccagtggacatcaacattgcagctaagtgcaatgcctgc
ctctccagcccatgcaagaacaacgggacgtgcagccaggaccccgtggagctgtaccgc
tgcacctgcccctatggctacaagggcaaagactgcaccgtgcccatcaacacctgcatc
cagaacccctgtcggcacgggggcacctgccacctgagcgacagccacaaggacgggttc
agctgctcctgccctctgggctttgagggccagcgctgtgagatcaatccagacgactgc
gaggacaacgactgtgaaaacaatgccacctgcgtggacgggatcaacaactacgtgtgt
gtctgccctcctaactacacgggtgagctgtgcgatgaagtgattgaccactgcgtgccc
gggatgaacctctgtcagcatgaggccaagtgcatctccctggacaaaggattcaggtgc
gaatgtctccccggctacagtgggaagctctgcgaggtggacaacgatgactgtgtggcc
cacaggtgccgccacggggcccagtgcgtggatgcggtcaacggctacacgtgcatctgc
ccccagggcttcagcgggctcctctgtgagcagcccccacccatggtcctgcttcagacc
agtccctgtgaccagtacgagtgccagaatggggcccagtgcatcgtggtacagcaggag
ccgacctgtcgctgccccccgggcttcgccggcccgaggtgcgagaagctcatcaccgtc
aactttgtgggcaaagactcctacgtggaactggcctccgccaaggtccggccccaggcc
aacatctccctgcaggtggccacggacaaggacaatggcatccttctctacaagggagac
aacgaccccctggcgctggagctgtaccagggccacgtgaggcttgtctatgacagtctg
agctccccacccaccacggtgtacagtgtggagaccgtgaatgatgggcagtttcacagt
gtggagctggtgatgctaaaccagaccctgaacctggtggtggataaaggagcccccaag
agcctgggaaagctccagaagcagccggcagtaggcatcaacagccccctctaccttgga
ggcatccccacctccacgggcctctcggccctgcgccagggcacagaccggccgctgggc
ggcttccacggctgcatccacgaggtgcgcattaacaacgagctgcaagacttcaaggcc
ctcccgccgcaagccctgggagtgtcccccggctgcaagtcctgcaccgtgtgcaagcat
ggcctgtgccgctccgtggagaaggacagcgtggtgtgcgagtgccacccgggctggacc
ggcccgctgtgcgaccacgaagtccgggacccctgtctgggccacagctgcaaccgcggg
aaatgtgtgccagctgggacctcgtacgtgtgcaagtgtgcagaaggctatagcggggcc
acgtgtgatcacaagaatgactccaacgcctgttctgccttcaagtgtcaccagggacaa
tgccatttctccgatcgaggggagcccttctgcctgtgccagcctggctttagtggggag
cactgcgagcaagagaacccatgcctgggggaggtggtccgagaggtgatccgccgccag
aagggctatgcctcatgtgccacggcctccaaagtgcccatcatggaatgtcgtgggggc
tgtgggccccagtgctgtcaacccacccgcagcaagcggcggaaatacgtcttccagtgc
accgacggctcctcattcgtcgaggaggtggagagacacctcgagtgcggctgccgccca
tgttcctaa
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integrated database retrieval system
