Mustela nigripes (black-footed ferret): 132028498
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Entry
132028498 CDS
T09425
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50 isoform X1
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
mnp
Mustela nigripes (black-footed ferret)
Pathway
mnp03440
Homologous recombination
mnp03450
Non-homologous end-joining
mnp04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
132028498 (RAD50)
03450 Non-homologous end-joining
132028498 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
132028498 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mnp03032
]
132028498 (RAD50)
03400 DNA repair and recombination proteins [BR:
mnp03400
]
132028498 (RAD50)
DNA replication proteins [BR:
mnp03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
132028498 (RAD50)
DNA repair and recombination proteins [BR:
mnp03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
132028498 (RAD50)
BRCA1-C complex
132028498 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
132028498 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
AAA_15
SMC_N
AAA_29
DUF2703
Motif
Other DBs
NCBI-GeneID:
132028498
NCBI-ProteinID:
XP_059273519
LinkDB
All DBs
Position
12:70206722..70339576
Genome browser
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGHTFVHDPKVAQETDVRAQIRLQFRDVNGEVIAVQRSMVCTQKSKKTEFKTLEGVITR
TKHGEKVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQAELKYLKQNKEKACEIRDQITSKEAQLTSSKEI
VKSYENELDPLKNRLKEIEQNLSKIMRLDNEIKALDSRKKQMEKDNSELEKKMEKVFQGT
DEQLNDLYHNHQRTVREKERRLVDCQRELEKLNKESRLLNQEKSELLVEQGRLQLQADRH
QEHIQARDSLIQSLATQLELDGFERGPFNERHIKNFHKLVRERQEREAEIASQLMNDFAE
KETLKQKQIDEIRDKKTGLGRIIELKSEILTKKQNELRNVKHELQQLEGSSDRILELDQE
LSKAERELSKAEKNNNVEALKTEVINLQNEKADLDRTLRKLDQEMEQLNYHTTTRTQMEM
LTRDKADKDEQIRKIKSRHSDELTSLLGYFPNKKQLEDWLHSKSKEINQTRDRLAKLNKE
LASSEQNKNHVNNELKKKEERLSSYEDKLFDVCGSQDFESDLERLKEEIEKSSKQRAMLA
GATAVYSQFITQLTDENQSCCPVCQRVFQTEAELQEVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQSIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQDTLLGTIMP
EEESAKVCLTDVTIMERLQMELKDVERKIAQQAAKLQGLDLDRTVQQVNQEKQEKQHKLD
TVSSKMELNRKLIQDQQEQIQHLKSTTNELKSEKLHISTNLQRRQQLEEQTVELSTEVQS
LFREIKDAKEQLSPLETTMEKFQQEKEEIINKKNKSNKIAQDKMNDIKEKVKNIHGYMKD
IENYIQDGKDDYKKQKENELNKVVAQLNEYEKHKENINKDMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEEKIDNIKRNHDLAVGRQKG
YEEEIIHFKRELREPQYRDAEEKYREMLIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRNTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVDKFYRIKKNIDQCSEIVKCSVSSLGSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattttgggcgtgcggagttttggaatagaggacaaa
gataagcaaattatcacttttttcagcccactcacaattttggttggacctaatggggcg
gggaagacgaccatcattgaatgtctcaaatatatttgtactggagattttcctcctgga
accaaaggacatacatttgttcatgatcccaaggttgctcaagaaacagatgtgagagcc
cagattcgtctacagtttcgtgatgtcaatggagaagttatagctgtacagagatctatg
gtgtgtactcagaaaagcaaaaagacagagtttaaaaccctggaaggagtcattactaga
acaaagcatggtgagaaggtcagtctcagctctaagtgtgcagaaattgaccgagagatg
ataagttctcttggggtttccaagtctgtgctaaataatgtcattttttgtcaccaagaa
gactctaattggcctctaagtgaagggaaggctctgaagcaaaaatttgatgaaattttt
tcagcaacaaggtacattaaagccttggaaacacttcggcaggtacgtcagacacaaggt
cagaaggtaaaagaatgtcaagcagaactaaaatatttgaagcaaaataaggaaaaagct
tgtgagatacgtgaccagattactagtaaggaagctcagttaacatcgtcaaaggaaatt
gtcaaatcctatgagaacgaacttgatccattgaagaatcgtctaaaagaaattgaacaa
aacctctctaaaataatgagacttgacaatgaaattaaagccttggatagccggaagaag
caaatggagaaagataatagtgaactggaaaagaaaatggaaaaggtttttcaagggact
gatgagcaattaaatgatttatatcataatcaccagagaacagtaagggagaaagaaagg
agactggtagactgtcagcgtgaactagagaagttaaataaagaatcaagacttctcaat
caggaaaaatcagaactgcttgttgagcagggtcgtttgcagctacaggcggatcgccat
caagaacatatccaagctagagattcattaattcagtctttggcaacacagctagaattg
gatggctttgaacgtggaccattcaatgaaagacatattaaaaattttcacaaacttgtg
agagagaggcaagaaagggaagcagaaattgccagccagctgatgaatgactttgcagaa
aaagaaactctgaaacaaaaacagatagatgaaataagggacaagaaaactggactggga
agaataattgagctaaaatcagaaatcctaacaaagaagcagaatgagctgagaaatgtg
aagcatgaattacagcagttggaaggatcttcagacaggattcttgaactagaccaggag
ctctcaaaagctgaacgtgagctaagcaaggctgagaaaaacaacaatgtagaagctcta
aaaacagaagttataaaccttcaaaatgagaaagcagacctagacaggaccctgcgtaaa
ttggaccaggagatggaacagttaaactatcatacaacaacacgcacccagatggagatg
ctgaccagagacaaagctgacaaagatgaacaaatcaggaaaataaaatctcgacacagt
gatgaattaacttcattgttaggatattttcccaataaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccagggacagacttgccaaattgaacaaagaa
ctagcttcatctgagcaaaataaaaatcatgtaaataatgaactaaaaaagaaagaagaa
cggttgtccagttatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagaaaggcttaaagaagaaattgaaaaatcctcaaaacagcgagccatgctggct
ggagccacagcagtttactcccagttcattactcagctaacagatgaaaaccagtcatgt
tgccctgtctgtcagagggtttttcagacagaagctgaattacaggaagtcatcagtgat
ttgcagtctaagctgcggcttgctccagataaactgaagtcaacagaatcagaactaaag
aaaaaagaaaagcggcgtgacgaaatgctgggacttgtccccatgaggcaaagcataatt
gatttgaaggagaaggaaataccggaattaagaaacaaactgcagaatgtcaatagagac
attcagcgcttaaagaatgacatagaggaacaggatacactcttgggcacaataatgcct
gaagaagaaagtgctaaagtctgcctgacagatgttacaattatggagaggctccagatg
gaacttaaagatgttgaaaggaaaattgcacaacaagcagctaagctgcaaggactagac
ttggatagaactgttcaacaagtaaaccaggaaaaacaagaaaagcaacacaaattagat
acagtttccagtaagatggaattgaatcgtaagcttatacaggaccagcaggaacagatc
caacaccttaaaagtacaacaaatgaacttaaatcagagaaacttcatatatctactaat
ttacaacgtcgtcagcaactagaggagcagactgtggaattatccactgaagttcaatct
ttattcagagagataaaggatgctaaagagcagttaagccctttggaaacaacaatggag
aaattccagcaggagaaagaagaaataatcaacaaaaaaaataaaagtaacaaaatagcc
caggataaaatgaatgatatcaaagaaaaggttaaaaatattcatggttatatgaaagac
attgagaattatattcaagatgggaaagatgactataagaagcaaaaagaaaatgaactt
aataaagtagtagctcaactaaatgaatatgagaaacacaaagaaaatataaataaagac
atgggaatcatgagacaagatattgatacacagaagatacaagagagatggctacaggat
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaaacag
catttgaaggaaatgggtcaaatgcaggttttacaaatgaagaatgaacatcagaagttg
gaagaaaaaatagacaatataaaaagaaatcacgatttggcagtagggcgacagaaaggt
tatgaggaagaaattattcattttaagagagaacttcgagaacctcaatatcgggatgca
gaagaaaagtacagggaaatgctgattgttatgagaacaacagagctcgtgaacaaggat
ctggacatttattataagacccttgatcaagcaatcatgaaatttcacagtatgaaaatg
gaagaaatcaacaaaattattcgtgacctttggcgaaatacctatcgtggacaagatatt
gaatacatagaaattcgatctgatgccgatgaaaatgtatcagcctctgataaaaggcgg
aattacaactaccgcgtggtaatgctaaaaggagacacagctttggatatgcgaggacga
tgcagtgctggacaaaaggtgttagcctccctcatcattcgcctggccttggctgaaacg
ttctgcttgaactgtggcatccttgccttggatgagccaacaacaaatcttgaccgagaa
aacattgagtctcttgcacatgctcttgttgagataatcaagagtcgctcacagcagcgc
aacttccagcttctggtcatcacacatgatgaagattttgtggagctcttaggccgctct
gaatatgtggataaattctacaggattaagaagaacattgatcagtgctcagagatcgtg
aaatgtagtgttagctccctgggttcttatgttcattaa
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integrated database retrieval system
