Mustela nigripes (black-footed ferret): 132028613 Help Entry 132028613         CDS       T09425                                  Symbol PCDH1 Name (RefSeq) protocadherin-1 isoform X1   KO K16498   protocadherin delta 1 Organism mnp  Mustela nigripes (black-footed ferret) Pathway mnp03273   Virion - Lassa virus and SFTS virus Brite KEGG Orthology (KO) [BR:mnp00001]  09120 Genetic Information Processing   09125 Information processing in viruses    03273 Virion - Lassa virus and SFTS virus     132028613 (PCDH1)  09180 Brite Hierarchies   09181 Protein families: metabolism    01009 Protein phosphatases and associated proteins [BR:mnp01009]     132028613 (PCDH1)   09183 Protein families: signaling and cellular processes    04515 Cell adhesion molecules [BR:mnp04515]     132028613 (PCDH1) Protein phosphatases and associated proteins [BR:mnp01009]  Protein serine/threonine phosphatases   Phosphoprotein phosphatases (PPPs)    Protein phosphatase-1     PP1-interacting proteins (PIPs)      132028613 (PCDH1) Cell adhesion molecules [BR:mnp04515]  Cadherins   Protocadherins    132028613 (PCDH1) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Cadherin Protocadherin Cadherin_2 Cadherin_CELSR2_9th Motif Other DBs NCBI-GeneID:  132028613 NCBI-ProteinID:  XP_059273776 LinkDB All DBs Position 12:complement(78511031..78537345) Genome browser AA seq 1237 aa AA seqDB search MVSRAGGRRCPEAALLILDPARMGPPRPNPGPGGQRLLLPPLPLALLLLLAASPGHATRV VYKVPEEQPPNTLIGSLAADYGFPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGL RECQNQLPGEPCILEFEVSITDLVQNGSPRLLEGQIEVQDINDNTPNFASPVITLPIPEN TNIGSLFPIPVASDRDAGPNGVASYELQAGPEAQELFGLQVAEDQEGKQPQLIVMGNLDR ERWDSYDLTIKVQDGGSPPRASSALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVI QVKANDSDQGANAEIDYTFHQAPEVVRRLLRLDRNTGLITVQGPVDREDLSTLRFSVLAK DRGTNPKSARAQVVVTVKDMNDNAPTIEIRGIGLVTHQDGMANISEDVAEETAVALVQVS DRDEGENAAVTCVVANDVPFQLRQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVD SGNPPLSSTNSLKVQVVDVNDNAPVFTQSVTEVAFPENNKPGEVVAEVTASDADSGSNAE LVYSLEPEPAAKGLFTISPDTGEIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLV NVLDCNDNDPKFMLSGYNFSVMENMPALSPVGMVTVIDGDKGENARVQLTVEQDNGDFVI QNGTGTILSSLSFDREHQSTYTFQLKAVDGGVPPRSAYVGVTINVLDENDNAPFITAPSN TSHQLLTPQTRLGETVSQVTAEDIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEI ERRHHGLHRLVVKVSDRGKPPRYGTALVHLYVNETLANRTLLETLLGHSLDTPLDIDIAG DPEYERSKQRGNILFGVVAGVVAVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPK PSSKASKGNKGKGKKSKSPKPVKPVEDEDEAGLQKSLKFNLMSDAPGDSPRIHLPLNYPP GSPDLGRHYRSNSPLPSIQLQPQSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDY SYRTNPPKYPSKQLPHRRVTFSATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLG PLALPEDHYERTTPDGSIGEMEHPENDLRPLPDVAMTGTCTQECSEFGHSDTCWMPGQSS PSRRTKSSALKLSTFVPYQDRGGQEPVGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHD SCKDSATLEEIPLTQTSDFPPAATPASAQTAKREIYL NT seq 3714 nt NT seq  +upstreamnt  +downstreamnt atggtcagcagggccggcggccggcgctgccccgaggcggccctcctgattctagatcct gccaggatggggcccccgaggcccaacccaggccccggggggcaacggttgctgctgccc cccttgccactggcactgctgcttctgctggcggcatccccaggccatgccactcgggtg gtgtacaaggtgccggaggaacagccacccaacacccttattgggagccttgctgcggac tatggttttccagacgtgggccacctgtacaaactagaggtaggcgccccatacctgcga gtggacggcaagacgggagacatcttcaccacggagacgtctattgaccgcgaggggctc cgtgaatgccagaaccagcttcctggtgagccttgcatcctggagtttgaggtgtctatt acagacctcgtgcagaacggcagtccccggctgttagagggccagatagaggtacaggac atcaatgacaacacacccaacttcgcctcgccagtcatcacgctccccatccctgagaac accaacattggctcactcttccccatcccagtggcttctgaccgcgacgccggccccaac ggtgtggcatcttatgaactgcaggccgggcctgaggcccaggagctgtttgggcttcag gtggcagaggaccaggaggggaagcagccacagctcatcgtgatgggcaacctagaccgg gagcgctgggattcctatgacctcaccatcaaggtgcaggatggcggcagccccccacgc gccagcagtgccctgctgcgcgtcactgtgcttgataccaacgacaacgcccccaagttc gagcggccctcctacgaggctgaactgtccgagaacagccccataggccactcagtcatc caggtgaaggccaatgactcggaccaaggcgccaacgcagagatcgactatacattccac caggcacctgaggtggtgaggcgtcttctgcgactggacaggaacactggacttatcact gtgcagggccccgtggatcgcgaggacctgagtaccctgcgcttctctgtgctcgccaag gaccgaggcaccaaccccaagagtgcccgtgcccaagtggtggtgactgtgaaggacatg aacgacaacgcccccaccattgagatccggggcatagggttggtgacccatcaagatggg atggctaatatctcggaggatgtggcagaggagacagctgtggccctggtgcaggtatct gaccgagatgagggagagaacgcagctgtcacctgtgtggtggcaaatgacgtgcccttc cagctgcgccaggccagtgagacgggaagtgacagcaaaaagaagtacttcttacagacc accactccactcgattacgagaaggtcaaagactacaccatagagattgtggccgtggac tctggcaaccccccgctctctagcaccaactccctcaaggtgcaggtggtagacgtcaat gacaatgcccctgtgttcacccagagtgtcactgaggttgccttcccagaaaacaacaag ccgggtgaagtggtcgccgaagtcactgccagtgatgccgactcaggctctaacgcggag ctggtttactctctggagccagagccagctgccaagggcctcttcactatctctcctgac actggagagatccgggtgaagacatcccttgatcgggaacagcgggatagttatgagtta aaggtggtggccgctgaccggggcagtcccagcctgcagggcacagccaccgtccttgtc aatgtgctggactgcaatgacaatgaccccaagtttatgctgagtggctacaacttctca gtgatggagaacatgccggcactgagtccagtgggcatggtgaccgtcattgatggggac aaaggggagaacgcccgggtacagctcacggtggagcaggacaatggtgatttcgttatc caaaatggcacaggcaccatcctctccagcctgagctttgatcgggagcatcagagcacc tataccttccagctgaaggcagtggacgggggtgtcccacctcgctcagcgtatgtgggt gtcaccatcaacgtgctggatgagaatgacaacgcacccttcatcacagccccttccaac acctcccaccagctgttgaccccacagacacgtcttggtgagacggtcagccaggtgaca gctgaggacattgactccggggtcaatgcggagttgacctacagcatcgctggtggcaat ccttacggactcttccagattggatcccattcaggggccatcacccttgagaaggagatt gagcggcgccatcatgggctccaccgcctggtggtgaaagtcagtgaccgaggcaagccc ccgcgctatggcacggccttggtccacctttacgtcaatgagaccctggccaaccgcacc cttctggagaccctgctgggccacagcctggacacgccactggacatcgatattgctggg gatccagaatatgagcgctccaagcaacgtggcaacatcctctttggagtggtggccggt gtggtggccgtggccttgctcattgccctggcagtgcttgtgcgctattgccggcagcgg gaggccaagagtggctaccaggctggcaagaaggaaaccaaggatctgtatgcccccaag cccagcagcaaagcctccaagggaaacaaaggcaagggcaagaagagcaagtccccaaag cctgtgaagccagtggaggacgaggatgaggctgggctgcagaaatccctcaagttcaac ctgatgagtgatgcccctggagacagcccccgcatccacctgcccctcaactacccgccg ggcagccctgacctgggccgccactaccgctcgaactccccactgccttccatccagctg cagccccagtcaccctcagcctcgaagaagcaccaagtggtgcaggacctgccacctgca aacacatttgtgggcactggtgacactacatccacgggctcagagcagtactccgactac agctaccgcaccaacccccccaaataccccagcaagcagttacctcaccgacgcgtcacc ttctccgccaccagtcaggcccaagaactgcaggacccgtcccagcacagttactatgac agtggcctggaggaatctgagacgccatccagcaagtcatcctcgggaccccgactcggt cccctggctctgcccgaggaccactatgagcgcaccacccccgatggcagcataggagag atggagcaccccgagaatgacctgcgccctttgcctgatgttgccatgacgggcacatgt acccaggagtgcagcgagtttggccactctgacacgtgctggatgccgggccagtcatct cccagccgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggac cgaggagggcaggagcctgtgggtgccggcagccccagccccccggaagaccggaacacc aaaacggcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgat tcctgcaaggactcggccaccttggaggaaattcccctgacccagacctcggacttccca cctgcagccacaccggcatctgcccagacagccaagcgtgagatctacctgtga

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