KEGG   Mustela nigripes (black-footed ferret): 132028616
Entry
132028616         CDS       T09425                                 
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
  KO
K16499  protocadherin delta 2
Organism
mnp  Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:mnp00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mnp04515]
    132028616 (PCDH12)
Cell adhesion molecules [BR:mnp04515]
 Cadherins
  Protocadherins
   132028616 (PCDH12)
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 132028616
NCBI-ProteinID: XP_059273784
LinkDB
Position
12:complement(78584639..78598804)
AA seq 1205 aa
MMRLLPLLLGLLGPGGYFFPPGHGQEVATLTVKYQVAEEVPSGTVIGKLSQELGWEEGRG
QMKTAFQVLQLSQALPIQVDPEDGLLSTGSRLDREQLCRQQDPCLVSFDVLATGDLALIH
VEIQVLDINDHEPQFPKGEQELEISESASLRTRIPLDRALDPDTGSNTLHSYTLSPSEHF
ALDVIVGPDETKHAELVVVKELDREIHSFFDLVLTAYDSGSPPKSGTSLVKVNVLDSNDN
SPMFAESSLALEIQEDAAPGTLLINLTATDPDQGPNGEVEFFLSKHVPPEVLDTFSIDAK
TGQVILRQRLDYEKNPAYEVDVQAKDLGPNPIPAHCKVLIKVLDVNDNAPSIHITWASEP
SLVSEALPKDSFIALVMADDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNTTLDR
EQWPEYTLTLLAQDQGLQPLSAKKQLSIQISDANDNAPVFERSRYEVSTRENNLPSLHLI
TVKAHDADLGLNGQISYRIQDSPVSHLVAIDSDTGDVTAQRSLDYEQMTSFEFRVIAEDK
GQPLLASSVSVWVSLLDVNDNTPEVIHPILSDGKASLSVLVNASTGHLLVPVETPNALGP
AGADTLPLATPSSRPFLLVAIVARDADSGANGELLYSIRRGNEARLFVLSPHLGQLFINI
TNASSLIGSEWELEIVVEDRGSPSLQTQALLRVLFVTSVDHLRDRAREPGTLSTSVLTVI
CLVVLLAIFGLILALIMSICRTEKKDNRAYNCREAESTYRHQPKRPQKHIQKADIHLVPV
LRGQPDEPGEVGQPHKEAGQEGMMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGAQAESRE
VLQDTVNLLFNHPRQRNASRENLNLPEPQSVMGQPRSRPPKVTGSPTGRLPGDPGSEEAP
LSPPASSATLRRQPNLHGKVTPEKESGPRQILRSLVRLSVAAFAERNPVEELTMDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPSGGRSTIPDPDGTGARAGGQAEPDQEEGCMD
PEEDLSVKQLLEEELSSLLDPHTGLALDRLSAPDPAWMARLSLPLTTNYRDNVFSPDTPA
VEEPRTFQTFGKAPGPELSLTGTRLASTFVSEMSSLLEMLLEQRSGVPMEAASEVLRRLS
VCGRTLSLDLATSGASGMEEQGGPGGTKGAGGRTGSSSSSSSSSSSRGLWIQEPGALGDS
REPRP
NT seq 3618 nt   +upstreamnt  +downstreamnt
atgatgcgacttctgccacttctgctggggcttttggggccaggtggctactttttccct
ccagggcatggtcaggaagtggccactctcactgtgaaataccaagtggcagaagaggtg
ccgtctgggacggtgatagggaagctgtcccaggaactgggctgggaggaggggcgtggg
cagatgaagactgccttccaggtcctgcagctgtctcaggcactccccatccaggtggac
cctgaggacggcctgcttagcacagggagccggctggaccgggaacagctctgccggcag
caggacccctgcctggtttcctttgacgtgcttgccacaggggacttggctctgatccat
gtggagatccaggtgctggacatcaatgaccatgagccacagttccccaaaggtgagcaa
gagctggaaatctctgagagtgcctctctgcgcacccggatccccctggacagagccctg
gacccagatactggctccaacaccttgcactcatacacactgtctcccagtgagcacttt
gccctggatgtcatcgtggggccagatgaaaccaaacatgcagaactcgtagtggtgaaa
gagctagaccgggaaatccactcattttttgatctggtgctaactgcctatgacagcggg
agccccccaaagtcaggcaccagcttggtcaaggtcaatgtcctggactccaatgacaat
agtcctatgtttgcggagagctccctggcactagaaatccaagaagatgctgctcctggt
actctcctcataaacttgactgccacagaccctgaccaaggtcccaatggggaggtggaa
ttcttcctcagtaaacatgtgcctccagaggttttggacaccttcagtatcgatgcaaag
acggggcaggtgattctgcgtcaacgcctagactatgaaaagaatcctgcctatgaggtg
gacgtccaggcaaaggacttaggtcccaatcccatcccagcccactgcaaagtcctcatc
aaggtcctggacgtcaatgacaatgccccaagcatccacatcacgtgggcgtctgaacca
tctctggtgtcagaggctcttccaaaggatagtttcattgctctcgtcatggcagatgac
ttggactcaggaaataatggtctggtccactgttggctgagccaagaactgggccatttc
aggctgaaaaggactaacggcaatacatacatgctattaaccaacacgacactggacaga
gagcagtggcccgaatataccctcactctgctggctcaagaccaaggactccagccatta
tcagccaagaaacagctcagcattcagatcagcgatgccaatgacaacgcacctgtgttt
gagaggagcaggtatgaggtctctactcgggagaacaacctaccttctcttcacctcatt
actgtcaaggctcatgatgcagacttgggcctaaatggacaaatctcataccgtatccag
gactccccagtttctcacttggtagctattgactcagacacaggagatgtcactgcccag
aggtcactagactatgaacagatgaccagttttgagttccgcgtgatcgcagaggacaag
ggccagcccctacttgcatccagcgtctctgtgtgggtcagcctcttggatgtcaatgat
aataccccagaggtgatccaccctatactcagtgatggaaaagccagcctctcagtgctc
gtcaatgcctccacaggccaccttctggtgcctgttgaaactcctaatgccttgggacca
gcaggggctgacacactgccactggcaacccccagttccaggccattccttttggttgcc
attgtagcaagagatgcagactcaggggcaaatggagagctcctctatagcattaggcgt
gggaatgaagcccgtctctttgtcctcagcccccacctgggccagctgttcatcaacatc
accaacgccagcagcctcattgggagtgagtgggagctggagatagtggtggaagaccgt
ggcagcccctccttgcagacacaagccctgctgagggtcttgtttgtcaccagcgtggat
cacctgagggaccgggcccgggagcctgggaccctgagcacatcggtgctgacagtgatt
tgcctggttgtgctgttggccatctttgggttgatcttggctctgattatgtccatctgc
aggacagagaagaaggacaatagggcctacaactgtcgggaggctgaatctacctaccgc
caccagcccaagaggccccagaaacacattcagaaggcagatatccaccttgtgcctgta
ctccggggccagccagacgagcctggtgaagtggggcagccccacaaggaagcaggtcag
gaagggatgatggaagcgggctgggacccctgcctgcaggccccctttcacctcacacca
acgctgtacagaaccctgcgtaaccaaggcaaccagggagcacaggctgagagccgagag
gtgctgcaagatactgtcaacctccttttcaaccatcccaggcagaggaacgcctccagg
gagaacctgaaccttcctgagccccagtctgtgatgggacagccacgctcaaggcccccg
aaggttacgggcagccccacagggaggcttccaggagacccaggcagcgaggaggctcca
ctgagtccaccggcctcctctgcaaccctgaggcggcagccgaatctccatggcaaagtg
acccccgagaaagagtcaggtccccggcagatcctgcggagtctggtccggctctctgtg
gctgcttttgcagagcggaaccccgtcgaggagctcacgatggattctcctcctgttcag
caaatctcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cggggaaataagtacttggccaagcccagcggcggcaggagcacaatcccagacccagat
ggcacaggtgccagggctggtggccaggcagaaccagaccaggaggaagggtgcatggat
cctgaagaggacctttctgtgaaacagctgctagaagaagagctatcaagcctgttggac
ccacacacaggcctggccctggaccgcctgagcgcccccgacccggcctggatggcgagg
ctctctttgcccctcaccacgaactaccgcgacaacgtgttctcaccggacactcccgcc
gtggaggagccgaggaccttccagacgttcggcaaggcgccggggccggagctgagcctg
acgggcacgcggctggccagcaccttcgtctcggagatgagctcgctgttggaaatgctg
ctggaacagcgctccggtgtgcccatggaggccgcctccgaggtgctgcggcggctgtct
gtctgcgggaggaccctcagtctggacctggccaccagcggggcctcgggcatggaggaa
caggggggtccggggggaactaagggggccgggggcaggactggcagcagcagcagcagc
agcagcagcagcagcagcaggggcctgtggatccaggaaccaggggccctgggggacagc
agggagcccaggccctga

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