Mustela nigripes (black-footed ferret): 132028616
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Entry
132028616 CDS
T09425
Symbol
PCDH12
Name
(RefSeq) protocadherin-12
KO
K16499
protocadherin delta 2
Organism
mnp
Mustela nigripes (black-footed ferret)
Brite
KEGG Orthology (KO) [BR:
mnp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mnp04515
]
132028616 (PCDH12)
Cell adhesion molecules [BR:
mnp04515
]
Cadherins
Protocadherins
132028616 (PCDH12)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Motif
Other DBs
NCBI-GeneID:
132028616
NCBI-ProteinID:
XP_059273784
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Position
12:complement(78584639..78598804)
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AA seq
1205 aa
AA seq
DB search
MMRLLPLLLGLLGPGGYFFPPGHGQEVATLTVKYQVAEEVPSGTVIGKLSQELGWEEGRG
QMKTAFQVLQLSQALPIQVDPEDGLLSTGSRLDREQLCRQQDPCLVSFDVLATGDLALIH
VEIQVLDINDHEPQFPKGEQELEISESASLRTRIPLDRALDPDTGSNTLHSYTLSPSEHF
ALDVIVGPDETKHAELVVVKELDREIHSFFDLVLTAYDSGSPPKSGTSLVKVNVLDSNDN
SPMFAESSLALEIQEDAAPGTLLINLTATDPDQGPNGEVEFFLSKHVPPEVLDTFSIDAK
TGQVILRQRLDYEKNPAYEVDVQAKDLGPNPIPAHCKVLIKVLDVNDNAPSIHITWASEP
SLVSEALPKDSFIALVMADDLDSGNNGLVHCWLSQELGHFRLKRTNGNTYMLLTNTTLDR
EQWPEYTLTLLAQDQGLQPLSAKKQLSIQISDANDNAPVFERSRYEVSTRENNLPSLHLI
TVKAHDADLGLNGQISYRIQDSPVSHLVAIDSDTGDVTAQRSLDYEQMTSFEFRVIAEDK
GQPLLASSVSVWVSLLDVNDNTPEVIHPILSDGKASLSVLVNASTGHLLVPVETPNALGP
AGADTLPLATPSSRPFLLVAIVARDADSGANGELLYSIRRGNEARLFVLSPHLGQLFINI
TNASSLIGSEWELEIVVEDRGSPSLQTQALLRVLFVTSVDHLRDRAREPGTLSTSVLTVI
CLVVLLAIFGLILALIMSICRTEKKDNRAYNCREAESTYRHQPKRPQKHIQKADIHLVPV
LRGQPDEPGEVGQPHKEAGQEGMMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGAQAESRE
VLQDTVNLLFNHPRQRNASRENLNLPEPQSVMGQPRSRPPKVTGSPTGRLPGDPGSEEAP
LSPPASSATLRRQPNLHGKVTPEKESGPRQILRSLVRLSVAAFAERNPVEELTMDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPSGGRSTIPDPDGTGARAGGQAEPDQEEGCMD
PEEDLSVKQLLEEELSSLLDPHTGLALDRLSAPDPAWMARLSLPLTTNYRDNVFSPDTPA
VEEPRTFQTFGKAPGPELSLTGTRLASTFVSEMSSLLEMLLEQRSGVPMEAASEVLRRLS
VCGRTLSLDLATSGASGMEEQGGPGGTKGAGGRTGSSSSSSSSSSSRGLWIQEPGALGDS
REPRP
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgacttctgccacttctgctggggcttttggggccaggtggctactttttccct
ccagggcatggtcaggaagtggccactctcactgtgaaataccaagtggcagaagaggtg
ccgtctgggacggtgatagggaagctgtcccaggaactgggctgggaggaggggcgtggg
cagatgaagactgccttccaggtcctgcagctgtctcaggcactccccatccaggtggac
cctgaggacggcctgcttagcacagggagccggctggaccgggaacagctctgccggcag
caggacccctgcctggtttcctttgacgtgcttgccacaggggacttggctctgatccat
gtggagatccaggtgctggacatcaatgaccatgagccacagttccccaaaggtgagcaa
gagctggaaatctctgagagtgcctctctgcgcacccggatccccctggacagagccctg
gacccagatactggctccaacaccttgcactcatacacactgtctcccagtgagcacttt
gccctggatgtcatcgtggggccagatgaaaccaaacatgcagaactcgtagtggtgaaa
gagctagaccgggaaatccactcattttttgatctggtgctaactgcctatgacagcggg
agccccccaaagtcaggcaccagcttggtcaaggtcaatgtcctggactccaatgacaat
agtcctatgtttgcggagagctccctggcactagaaatccaagaagatgctgctcctggt
actctcctcataaacttgactgccacagaccctgaccaaggtcccaatggggaggtggaa
ttcttcctcagtaaacatgtgcctccagaggttttggacaccttcagtatcgatgcaaag
acggggcaggtgattctgcgtcaacgcctagactatgaaaagaatcctgcctatgaggtg
gacgtccaggcaaaggacttaggtcccaatcccatcccagcccactgcaaagtcctcatc
aaggtcctggacgtcaatgacaatgccccaagcatccacatcacgtgggcgtctgaacca
tctctggtgtcagaggctcttccaaaggatagtttcattgctctcgtcatggcagatgac
ttggactcaggaaataatggtctggtccactgttggctgagccaagaactgggccatttc
aggctgaaaaggactaacggcaatacatacatgctattaaccaacacgacactggacaga
gagcagtggcccgaatataccctcactctgctggctcaagaccaaggactccagccatta
tcagccaagaaacagctcagcattcagatcagcgatgccaatgacaacgcacctgtgttt
gagaggagcaggtatgaggtctctactcgggagaacaacctaccttctcttcacctcatt
actgtcaaggctcatgatgcagacttgggcctaaatggacaaatctcataccgtatccag
gactccccagtttctcacttggtagctattgactcagacacaggagatgtcactgcccag
aggtcactagactatgaacagatgaccagttttgagttccgcgtgatcgcagaggacaag
ggccagcccctacttgcatccagcgtctctgtgtgggtcagcctcttggatgtcaatgat
aataccccagaggtgatccaccctatactcagtgatggaaaagccagcctctcagtgctc
gtcaatgcctccacaggccaccttctggtgcctgttgaaactcctaatgccttgggacca
gcaggggctgacacactgccactggcaacccccagttccaggccattccttttggttgcc
attgtagcaagagatgcagactcaggggcaaatggagagctcctctatagcattaggcgt
gggaatgaagcccgtctctttgtcctcagcccccacctgggccagctgttcatcaacatc
accaacgccagcagcctcattgggagtgagtgggagctggagatagtggtggaagaccgt
ggcagcccctccttgcagacacaagccctgctgagggtcttgtttgtcaccagcgtggat
cacctgagggaccgggcccgggagcctgggaccctgagcacatcggtgctgacagtgatt
tgcctggttgtgctgttggccatctttgggttgatcttggctctgattatgtccatctgc
aggacagagaagaaggacaatagggcctacaactgtcgggaggctgaatctacctaccgc
caccagcccaagaggccccagaaacacattcagaaggcagatatccaccttgtgcctgta
ctccggggccagccagacgagcctggtgaagtggggcagccccacaaggaagcaggtcag
gaagggatgatggaagcgggctgggacccctgcctgcaggccccctttcacctcacacca
acgctgtacagaaccctgcgtaaccaaggcaaccagggagcacaggctgagagccgagag
gtgctgcaagatactgtcaacctccttttcaaccatcccaggcagaggaacgcctccagg
gagaacctgaaccttcctgagccccagtctgtgatgggacagccacgctcaaggcccccg
aaggttacgggcagccccacagggaggcttccaggagacccaggcagcgaggaggctcca
ctgagtccaccggcctcctctgcaaccctgaggcggcagccgaatctccatggcaaagtg
acccccgagaaagagtcaggtccccggcagatcctgcggagtctggtccggctctctgtg
gctgcttttgcagagcggaaccccgtcgaggagctcacgatggattctcctcctgttcag
caaatctcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cggggaaataagtacttggccaagcccagcggcggcaggagcacaatcccagacccagat
ggcacaggtgccagggctggtggccaggcagaaccagaccaggaggaagggtgcatggat
cctgaagaggacctttctgtgaaacagctgctagaagaagagctatcaagcctgttggac
ccacacacaggcctggccctggaccgcctgagcgcccccgacccggcctggatggcgagg
ctctctttgcccctcaccacgaactaccgcgacaacgtgttctcaccggacactcccgcc
gtggaggagccgaggaccttccagacgttcggcaaggcgccggggccggagctgagcctg
acgggcacgcggctggccagcaccttcgtctcggagatgagctcgctgttggaaatgctg
ctggaacagcgctccggtgtgcccatggaggccgcctccgaggtgctgcggcggctgtct
gtctgcgggaggaccctcagtctggacctggccaccagcggggcctcgggcatggaggaa
caggggggtccggggggaactaagggggccgggggcaggactggcagcagcagcagcagc
agcagcagcagcagcagcaggggcctgtggatccaggaaccaggggccctgggggacagc
agggagcccaggccctga
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integrated database retrieval system